RNA–Protein interactions for RNA: ENST00000639004.1

FAM49B-230, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 5 BASIC

Gene FAM49B, Length 837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-230ENST00000639004 AEBP2Q6ZN18 517 aaPredicted RBP29.31■■■□□ 2.28
FAM49B-230ENST00000639004 CHIC1Q5VXU3 224 aa28.99■■■□□ 2.23
FAM49B-230ENST00000639004 PHF23Q9BUL5 403 aaPredicted RBP25.57■■□□□ 1.68
FAM49B-230ENST00000639004 SENP3Q9H4L4 574 aaPredicted RBP24.75■■□□□ 1.55
FAM49B-230ENST00000639004 PLPPR3Q6T4P5 718 aa23.7■■□□□ 1.38
FAM49B-230ENST00000639004 FOXD1Q16676 465 aa22.95■■□□□ 1.26
FAM49B-230ENST00000639004 PPP6R1Q9UPN7 881 aa22.42■■□□□ 1.18
FAM49B-230ENST00000639004 ADRA2BP18089 450 aa22.41■■□□□ 1.18
FAM49B-230ENST00000639004 PIAS4Q8N2W9 510 aaPredicted RBP21.72■■□□□ 1.07
FAM49B-230ENST00000639004 POTEDQ86YR6 584 aa21.13■□□□□ 0.97
FAM49B-230ENST00000639004 MSH5O43196 834 aa20.97■□□□□ 0.95
FAM49B-230ENST00000639004 PPP4R3CPQ6ZMV5 832 aa20.95■□□□□ 0.94
FAM49B-230ENST00000639004 KCNA4P22459 653 aa20.94■□□□□ 0.94
FAM49B-230ENST00000639004 NCBP3Q53F19 620 aaKnown RBP20.48■□□□□ 0.87
FAM49B-230ENST00000639004 SCAF1Q9H7N4 1312 aaKnown RBP20.45■□□□□ 0.86
FAM49B-230ENST00000639004 CNKSR2Q8WXI2 1034 aa20.26■□□□□ 0.83
FAM49B-230ENST00000639004 NPM3O75607 178 aaKnown RBP20.23■□□□□ 0.83
FAM49B-230ENST00000639004 MAPK8IP2Q13387 824 aaPredicted RBP20.22■□□□□ 0.83
FAM49B-230ENST00000639004 SLC4A1APQ9BWU0 796 aaKnown RBP19.99■□□□□ 0.79
FAM49B-230ENST00000639004 EHMT2Q96KQ7 1210 aa19.9■□□□□ 0.78
FAM49B-230ENST00000639004 DMRT2Q9Y5R5 561 aa19.84■□□□□ 0.77
FAM49B-230ENST00000639004 RNF216Q9NWF9 866 aaPredicted RBP19.77■□□□□ 0.76
FAM49B-230ENST00000639004 HOXD11P31277 338 aaPredicted RBP19.6■□□□□ 0.73
FAM49B-230ENST00000639004 DNAJC5BQ9UF47 199 aa19.58■□□□□ 0.72
FAM49B-230ENST00000639004 CSRNP3Q8WYN3 585 aa19.51■□□□□ 0.71
FAM49B-230ENST00000639004 ZBTB22O15209 634 aa19.3■□□□□ 0.68
FAM49B-230ENST00000639004 FOXD4L1Q9NU39 408 aa19.14■□□□□ 0.65
FAM49B-230ENST00000639004 SLC4A2P04920 1241 aa19.02■□□□□ 0.64
FAM49B-230ENST00000639004 DCAF8L1A6NGE4 600 aa18.93■□□□□ 0.62
FAM49B-230ENST00000639004 MYCNP04198 464 aaPredicted RBP18.66■□□□□ 0.58
FAM49B-230ENST00000639004 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.64■□□□□ 0.57
FAM49B-230ENST00000639004 U3KPZ7 1027 aaPredicted RBP18.43■□□□□ 0.54
FAM49B-230ENST00000639004 ATXN8OSP0DMR3 200 aa18.42■□□□□ 0.54
FAM49B-230ENST00000639004 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.28■□□□□ 0.52
FAM49B-230ENST00000639004 HNRNPUL2Q1KMD3 747 aaKnown RBP18.28■□□□□ 0.52
FAM49B-230ENST00000639004 SAMD1Q6SPF0 538 aaPredicted RBP18.24■□□□□ 0.51
FAM49B-230ENST00000639004 CACNB1Q02641 598 aaPredicted RBP18.2■□□□□ 0.5
FAM49B-230ENST00000639004 ATF5Q9Y2D1 282 aaPredicted RBP18.17■□□□□ 0.5
FAM49B-230ENST00000639004 RNF39Q9H2S5 420 aa18.03■□□□□ 0.48
FAM49B-230ENST00000639004 APLP2Q06481 763 aa17.98■□□□□ 0.47
FAM49B-230ENST00000639004 C1QBPQ07021 282 aaKnown RBP17.82■□□□□ 0.44
FAM49B-230ENST00000639004 ZNF219Q9P2Y4 722 aaPredicted RBP17.81■□□□□ 0.44
FAM49B-230ENST00000639004 SPINK5Q9NQ38 1064 aaPredicted RBP17.79■□□□□ 0.44
FAM49B-230ENST00000639004 TRHP20396 242 aaPredicted RBP17.69■□□□□ 0.42
FAM49B-230ENST00000639004 CAPN15O75808 1086 aa17.67■□□□□ 0.42
FAM49B-230ENST00000639004 FKBP8Q14318 412 aa17.59■□□□□ 0.41
FAM49B-230ENST00000639004 POLA2Q14181 598 aa17.5■□□□□ 0.39
FAM49B-230ENST00000639004 MKRN4PQ13434 485 aaPredicted RBP17.41■□□□□ 0.38
FAM49B-230ENST00000639004 ABCB7O75027 752 aa17.39■□□□□ 0.37
FAM49B-230ENST00000639004 FBLN2P98095 1184 aa17.33■□□□□ 0.36
FAM49B-230ENST00000639004 DSG3P32926 999 aa17.3■□□□□ 0.36
FAM49B-230ENST00000639004 ZBTB12Q9Y330 459 aaPredicted RBP17.22■□□□□ 0.35
FAM49B-230ENST00000639004 SPDYE4A6NLX3 237 aa17.17■□□□□ 0.34
FAM49B-230ENST00000639004 PROM2Q8N271 834 aa16.98■□□□□ 0.31
FAM49B-230ENST00000639004 OSCARQ8IYS5 282 aa16.91■□□□□ 0.3
FAM49B-230ENST00000639004 FBXO3Q9UK99 471 aa16.82■□□□□ 0.28
FAM49B-230ENST00000639004 SPDYE2BA6NHP3 402 aa16.81■□□□□ 0.28
FAM49B-230ENST00000639004 SPDYE6P0CI01 402 aa16.81■□□□□ 0.28
FAM49B-230ENST00000639004 SPDYE2Q495Y8 402 aa16.81■□□□□ 0.28
FAM49B-230ENST00000639004 ZNF692Q9BU19 519 aaPredicted RBP16.8■□□□□ 0.28
FAM49B-230ENST00000639004 SSUH2Q9Y2M2 353 aa16.75■□□□□ 0.27
FAM49B-230ENST00000639004 AMER1Q5JTC6 1135 aaPredicted RBP16.73■□□□□ 0.27
FAM49B-230ENST00000639004 RTN4Q9NQC3 1192 aaKnown RBP16.72■□□□□ 0.27
FAM49B-230ENST00000639004 VASPP50552 380 aaPredicted RBP16.61■□□□□ 0.25
FAM49B-230ENST00000639004 PABPN1Q86U42 306 aaKnown RBP eCLIP16.6■□□□□ 0.25
FAM49B-230ENST00000639004 POTEHQ6S545 545 aa16.49■□□□□ 0.23
FAM49B-230ENST00000639004 RBM42Q9BTD8 480 aaKnown RBP16.44■□□□□ 0.22
FAM49B-230ENST00000639004 IFNLR1Q8IU57 520 aaPredicted RBP16.43■□□□□ 0.22
FAM49B-230ENST00000639004 STAG3Q9UJ98 1225 aa16.43■□□□□ 0.22
FAM49B-230ENST00000639004 AKT1S1Q96B36 256 aa16.35■□□□□ 0.21
FAM49B-230ENST00000639004 PLCD3Q8N3E9 789 aa16.24■□□□□ 0.19
FAM49B-230ENST00000639004 MIER1Q8N108 512 aa16.22■□□□□ 0.19
FAM49B-230ENST00000639004 SPDYE1Q8NFV5 336 aaPredicted RBP16.21■□□□□ 0.19
FAM49B-230ENST00000639004 REM2Q8IYK8 340 aaPredicted RBP16.2■□□□□ 0.18
FAM49B-230ENST00000639004 KLHL34Q8N239 644 aa16.2■□□□□ 0.18
FAM49B-230ENST00000639004 SPOCK2Q92563 424 aa16.14■□□□□ 0.17
FAM49B-230ENST00000639004 CLEC11AQ9Y240 323 aa16.11■□□□□ 0.17
FAM49B-230ENST00000639004 PLEKHG5O94827 1062 aa16.08■□□□□ 0.16
FAM49B-230ENST00000639004 PKD2Q13563 968 aa16.04■□□□□ 0.16
FAM49B-230ENST00000639004 ZBTB47Q9UFB7 747 aaPredicted RBP16.03■□□□□ 0.16
FAM49B-230ENST00000639004 PITPNM1O00562 1244 aa16.02■□□□□ 0.16
FAM49B-230ENST00000639004 PRR29P0C7W0 189 aa16.02■□□□□ 0.16
FAM49B-230ENST00000639004 CREBZFQ9NS37 354 aa15.95■□□□□ 0.14
FAM49B-230ENST00000639004 MNX1P50219 401 aaPredicted RBP15.85■□□□□ 0.13
FAM49B-230ENST00000639004 ECM2O94769 699 aaPredicted RBP15.84■□□□□ 0.13
FAM49B-230ENST00000639004 CIZ1Q9ULV3 898 aaPredicted RBP15.82■□□□□ 0.12
FAM49B-230ENST00000639004 NUBP1P53384 320 aa15.81■□□□□ 0.12
FAM49B-230ENST00000639004 DCAF8L2P0C7V8 631 aa15.77■□□□□ 0.12
FAM49B-230ENST00000639004 SLC24A1O60721 1099 aa15.75■□□□□ 0.11
FAM49B-230ENST00000639004 GSE1Q14687 1217 aa15.71■□□□□ 0.11
FAM49B-230ENST00000639004 CHADLQ6NUI6 762 aa15.71■□□□□ 0.11
FAM49B-230ENST00000639004 RGL2O15211 777 aa15.7■□□□□ 0.1
FAM49B-230ENST00000639004 TRIM41Q8WV44 630 aa15.67■□□□□ 0.1
FAM49B-230ENST00000639004 DCAF8Q5TAQ9 597 aa15.66■□□□□ 0.1
FAM49B-230ENST00000639004 NPM1P06748 294 aaKnown RBP eCLIP15.65■□□□□ 0.1
FAM49B-230ENST00000639004 RASEFQ8IZ41 740 aa15.65■□□□□ 0.1
FAM49B-230ENST00000639004 FAM212AQ96EL1 285 aa15.64■□□□□ 0.09
FAM49B-230ENST00000639004 FXR2P51116 673 aaKnown RBP eCLIP15.63■□□□□ 0.09
FAM49B-230ENST00000639004 CHRDL2Q6WN34 429 aa15.61■□□□□ 0.09
FAM49B-230ENST00000639004 PRKAR2AP13861 404 aaKnown RBP15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms