RNA–Protein interactions for RNA: ENST00000444278.2

DEF6-202, Transcript of DEF6, guanine nucleotide exchange factor, humanhuman

TSL 3

Gene DEF6, Length 385 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEF6-202ENST00000444278 NISCHQ9Y2I1 1504 aa35.92■■■■□ 3.34
DEF6-202ENST00000444278 CCDC180Q9P1Z9 1646 aa31.64■■■□□ 2.66
DEF6-202ENST00000444278 ABCC9O60706 1549 aa30.92■■■□□ 2.54
DEF6-202ENST00000444278 ZCCHC6Q5VYS8 1495 aaKnown RBP30.03■■■□□ 2.4
DEF6-202ENST00000444278 DCAF8L2P0C7V8 631 aa29.95■■■□□ 2.39
DEF6-202ENST00000444278 DCAF1Q9Y4B6 1507 aa29.75■■■□□ 2.35
DEF6-202ENST00000444278 NACADO15069 1562 aa29.62■■■□□ 2.33
DEF6-202ENST00000444278 MYO15BQ96JP2 1530 aa29.61■■■□□ 2.33
DEF6-202ENST00000444278 RB1CC1Q8TDY2 1594 aa29.5■■■□□ 2.31
DEF6-202ENST00000444278 DNAJC5BQ9UF47 199 aa29.23■■■□□ 2.27
DEF6-202ENST00000444278 SCRIBQ14160 1630 aa28.93■■■□□ 2.22
DEF6-202ENST00000444278 SHROOM4Q9ULL8 1493 aa28.88■■■□□ 2.21
DEF6-202ENST00000444278 PABPN1Q86U42 306 aaKnown RBP eCLIP28.81■■■□□ 2.2
DEF6-202ENST00000444278 UNC13AQ9UPW8 1703 aa28.74■■■□□ 2.19
DEF6-202ENST00000444278 BICRAQ9NZM4 1560 aa28.45■■■□□ 2.15
DEF6-202ENST00000444278 CC2D2AQ9P2K1 1620 aa27.9■■■□□ 2.06
DEF6-202ENST00000444278 CECR2Q9BXF3 1484 aa27.89■■■□□ 2.05
DEF6-202ENST00000444278 BAZ1AQ9NRL2 1556 aaPredicted RBP27.84■■■□□ 2.05
DEF6-202ENST00000444278 EIF4G1Q04637 1599 aaKnown RBP27.79■■■□□ 2.04
DEF6-202ENST00000444278 SMARCA4P51532 1647 aa27.72■■■□□ 2.03
DEF6-202ENST00000444278 MROH2BQ7Z745 1585 aa27.66■■■□□ 2.02
DEF6-202ENST00000444278 RSF1Q96T23 1441 aaPredicted RBP27.62■■■□□ 2.01
DEF6-202ENST00000444278 SUPT5HO00267 1087 aaKnown RBP27.62■■■□□ 2.01
DEF6-202ENST00000444278 SMARCA2P51531 1590 aa27.46■■□□□ 1.99
DEF6-202ENST00000444278 WIZO95785 1651 aa27.43■■□□□ 1.98
DEF6-202ENST00000444278 PEG3Q9GZU2 1588 aa27.4■■□□□ 1.98
DEF6-202ENST00000444278 ATAD2BQ9ULI0 1458 aa27.39■■□□□ 1.98
DEF6-202ENST00000444278 NCAPD3P42695 1498 aa27.28■■□□□ 1.96
DEF6-202ENST00000444278 BAZ1BQ9UIG0 1483 aaKnown RBP27.27■■□□□ 1.96
DEF6-202ENST00000444278 HMGXB3Q12766 1538 aa27.21■■□□□ 1.95
DEF6-202ENST00000444278 TOP2AP11388 1531 aaKnown RBP27.2■■□□□ 1.94
DEF6-202ENST00000444278 DNAJC5Q9H3Z4 198 aa27.03■■□□□ 1.92
DEF6-202ENST00000444278 CCDC88BA6NC98 1476 aa26.88■■□□□ 1.89
DEF6-202ENST00000444278 CUX2O14529 1486 aa26.75■■□□□ 1.87
DEF6-202ENST00000444278 ERCC6Q03468 1493 aa26.74■■□□□ 1.87
DEF6-202ENST00000444278 CADPSQ9ULU8 1353 aa26.57■■□□□ 1.84
DEF6-202ENST00000444278 CFTRP13569 1480 aa26.51■■□□□ 1.83
DEF6-202ENST00000444278 NESP48681 1621 aa26.49■■□□□ 1.83
DEF6-202ENST00000444278 LAMC3Q9Y6N6 1575 aa26.49■■□□□ 1.83
DEF6-202ENST00000444278 PRDM2Q13029 1718 aa26.4■■□□□ 1.82
DEF6-202ENST00000444278 PDS5BQ9NTI5 1447 aa26.35■■□□□ 1.81
DEF6-202ENST00000444278 FANCD2Q9BXW9 1451 aa26.25■■□□□ 1.79
DEF6-202ENST00000444278 THOC2Q8NI27 1593 aaKnown RBP26.21■■□□□ 1.79
DEF6-202ENST00000444278 CEP164Q9UPV0 1460 aa26.18■■□□□ 1.78
DEF6-202ENST00000444278 KIF21AQ7Z4S6 1674 aa26.12■■□□□ 1.77
DEF6-202ENST00000444278 CHIC1Q5VXU3 224 aa26.11■■□□□ 1.77
DEF6-202ENST00000444278 WRNQ14191 1432 aaPredicted RBP eCLIP26.09■■□□□ 1.77
DEF6-202ENST00000444278 TRIM41Q8WV44 630 aa26.09■■□□□ 1.77
DEF6-202ENST00000444278 ABCC8Q09428 1581 aa26.08■■□□□ 1.77
DEF6-202ENST00000444278 MRC2Q9UBG0 1479 aa25.97■■□□□ 1.75
DEF6-202ENST00000444278 DNMBPQ6XZF7 1577 aa25.93■■□□□ 1.74
DEF6-202ENST00000444278 CUX1P39880 1505 aa25.92■■□□□ 1.74
DEF6-202ENST00000444278 TOP2BQ02880 1626 aa25.92■■□□□ 1.74
DEF6-202ENST00000444278 SYNJ1O43426 1573 aa25.9■■□□□ 1.74
DEF6-202ENST00000444278 BIVM-ERCC5R4GMW8 1640 aa25.89■■□□□ 1.74
DEF6-202ENST00000444278 URB2Q14146 1524 aaKnown RBP25.88■■□□□ 1.73
DEF6-202ENST00000444278 TOPBP1Q92547 1522 aa25.88■■□□□ 1.73
DEF6-202ENST00000444278 WDR62O43379 1518 aa25.85■■□□□ 1.73
DEF6-202ENST00000444278 FGD5Q6ZNL6 1462 aa25.76■■□□□ 1.71
DEF6-202ENST00000444278 POLA1P09884 1462 aaPredicted RBP25.7■■□□□ 1.7
DEF6-202ENST00000444278 SOGA1O94964 1423 aa25.7■■□□□ 1.7
DEF6-202ENST00000444278 IFT140Q96RY7 1462 aa25.6■■□□□ 1.69
DEF6-202ENST00000444278 RAD54L2Q9Y4B4 1467 aa25.6■■□□□ 1.69
DEF6-202ENST00000444278 OSCARQ8IYS5 282 aa25.59■■□□□ 1.69
DEF6-202ENST00000444278 ABCA10Q8WWZ4 1543 aa25.54■■□□□ 1.68
DEF6-202ENST00000444278 EEA1Q15075 1411 aa25.54■■□□□ 1.68
DEF6-202ENST00000444278 KIF27Q86VH2 1401 aa25.54■■□□□ 1.68
DEF6-202ENST00000444278 TARBP1Q13395 1621 aaKnown RBP25.51■■□□□ 1.67
DEF6-202ENST00000444278 FAM9AQ8IZU1 332 aaPredicted RBP25.5■■□□□ 1.67
DEF6-202ENST00000444278 WDR97A6NE52 1622 aa25.45■■□□□ 1.67
DEF6-202ENST00000444278 TDRD9Q8NDG6 1382 aaKnown RBP25.43■■□□□ 1.66
DEF6-202ENST00000444278 CSRNP3Q8WYN3 585 aa25.41■■□□□ 1.66
DEF6-202ENST00000444278 RUSC2Q8N2Y8 1516 aa25.39■■□□□ 1.66
DEF6-202ENST00000444278 GAPVD1Q14C86 1478 aa25.39■■□□□ 1.65
DEF6-202ENST00000444278 ABCA5Q8WWZ7 1642 aa25.34■■□□□ 1.65
DEF6-202ENST00000444278 AQRO60306 1485 aaKnown RBP eCLIP25.34■■□□□ 1.65
DEF6-202ENST00000444278 ZNF608Q9ULD9 1512 aaPredicted RBP25.33■■□□□ 1.65
DEF6-202ENST00000444278 GRIN2BQ13224 1484 aa25.29■■□□□ 1.64
DEF6-202ENST00000444278 EIF4G3O43432 1585 aaKnown RBP25.29■■□□□ 1.64
DEF6-202ENST00000444278 IGF1RP08069 1367 aa25.28■■□□□ 1.64
DEF6-202ENST00000444278 ERICH3Q5RHP9 1530 aa25.27■■□□□ 1.64
DEF6-202ENST00000444278 PBRM1Q86U86 1689 aa25.26■■□□□ 1.63
DEF6-202ENST00000444278 CARMIL1Q5VZK9 1371 aa25.2■■□□□ 1.63
DEF6-202ENST00000444278 CUL7Q14999 1698 aa25.2■■□□□ 1.63
DEF6-202ENST00000444278 RIMBP3CA6NJZ7 1639 aa25.14■■□□□ 1.61
DEF6-202ENST00000444278 RIMBP3BA6NNM3 1639 aa25.14■■□□□ 1.61
DEF6-202ENST00000444278 RIMBP3Q9UFD9 1639 aa25.14■■□□□ 1.61
DEF6-202ENST00000444278 MAGI1Q96QZ7 1491 aaPredicted RBP25.14■■□□□ 1.61
DEF6-202ENST00000444278 KIF21BO75037 1637 aa25.13■■□□□ 1.61
DEF6-202ENST00000444278 FHAD1B1AJZ9 1412 aa25.12■■□□□ 1.61
DEF6-202ENST00000444278 EHMT2Q96KQ7 1210 aa25.12■■□□□ 1.61
DEF6-202ENST00000444278 SNAPC4Q5SXM2 1469 aa25.12■■□□□ 1.61
DEF6-202ENST00000444278 PRXQ9BXM0 1461 aa25.12■■□□□ 1.61
DEF6-202ENST00000444278 RAPGEF2Q9Y4G8 1499 aa25.12■■□□□ 1.61
DEF6-202ENST00000444278 GOLGA3Q08378 1498 aa25.09■■□□□ 1.61
DEF6-202ENST00000444278 UBTFP17480 764 aaKnown RBP25.09■■□□□ 1.61
DEF6-202ENST00000444278 CHMP7Q8WUX9 453 aaPredicted RBP25.08■■□□□ 1.61
DEF6-202ENST00000444278 LOC105371045A0A1W2PR82 267 aa25.06■■□□□ 1.6
DEF6-202ENST00000444278 ARHGEF11O15085 1522 aa25.06■■□□□ 1.6
DEF6-202ENST00000444278 ADAMTS12P58397 1594 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms