RNA–Protein interactions for RNA: ENST00000515792.5

RPS3A-213, Transcript of ribosomal protein S3A, humanhuman

TSL 3

Gene RPS3A, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-213ENST00000515792 AEBP2Q6ZN18 517 aaPredicted RBP20.69■□□□□ 0.9
RPS3A-213ENST00000515792 CHIC1Q5VXU3 224 aa19.51■□□□□ 0.71
RPS3A-213ENST00000515792 SENP3Q9H4L4 574 aaPredicted RBP17.74■□□□□ 0.43
RPS3A-213ENST00000515792 PHF23Q9BUL5 403 aaPredicted RBP17.45■□□□□ 0.38
RPS3A-213ENST00000515792 FOXD1Q16676 465 aa16.51■□□□□ 0.23
RPS3A-213ENST00000515792 MSH5O43196 834 aa15.57■□□□□ 0.08
RPS3A-213ENST00000515792 PLPPR3Q6T4P5 718 aa15.53■□□□□ 0.08
RPS3A-213ENST00000515792 POTEDQ86YR6 584 aa15.45■□□□□ 0.06
RPS3A-213ENST00000515792 PIAS4Q8N2W9 510 aaPredicted RBP15.41■□□□□ 0.06
RPS3A-213ENST00000515792 PPP6R1Q9UPN7 881 aa15.28■□□□□ 0.04
RPS3A-213ENST00000515792 ADRA2BP18089 450 aa15.24■□□□□ 0.03
RPS3A-213ENST00000515792 MAPK8IP2Q13387 824 aaPredicted RBP14.04□□□□□ -0.16
RPS3A-213ENST00000515792 DMRT2Q9Y5R5 561 aa14.03□□□□□ -0.16
RPS3A-213ENST00000515792 SCAF1Q9H7N4 1312 aaKnown RBP14□□□□□ -0.17
RPS3A-213ENST00000515792 PPP4R3CPQ6ZMV5 832 aa13.57□□□□□ -0.24
RPS3A-213ENST00000515792 DCAF8L1A6NGE4 600 aa13.47□□□□□ -0.25
RPS3A-213ENST00000515792 CACNB1Q02641 598 aaPredicted RBP13.46□□□□□ -0.25
RPS3A-213ENST00000515792 HOXD11P31277 338 aaPredicted RBP13.43□□□□□ -0.26
RPS3A-213ENST00000515792 CNKSR2Q8WXI2 1034 aa13.38□□□□□ -0.27
RPS3A-213ENST00000515792 RNF216Q9NWF9 866 aaPredicted RBP13.3□□□□□ -0.28
RPS3A-213ENST00000515792 RNF39Q9H2S5 420 aa13.24□□□□□ -0.29
RPS3A-213ENST00000515792 C1QBPQ07021 282 aaKnown RBP13.05□□□□□ -0.32
RPS3A-213ENST00000515792 NCBP3Q53F19 620 aaKnown RBP13.04□□□□□ -0.32
RPS3A-213ENST00000515792 DNAJC5BQ9UF47 199 aa13.03□□□□□ -0.32
RPS3A-213ENST00000515792 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.82□□□□□ -0.365e-8■■□□□ 14.3
RPS3A-213ENST00000515792 NPM3O75607 178 aaKnown RBP12.8□□□□□ -0.36
RPS3A-213ENST00000515792 U3KPZ7 1027 aaPredicted RBP12.51□□□□□ -0.41
RPS3A-213ENST00000515792 KCNA4P22459 653 aa12.4□□□□□ -0.42
RPS3A-213ENST00000515792 CAPN15O75808 1086 aa12.38□□□□□ -0.43
RPS3A-213ENST00000515792 SPINK5Q9NQ38 1064 aaPredicted RBP12.37□□□□□ -0.43
RPS3A-213ENST00000515792 DSG3P32926 999 aa12.33□□□□□ -0.44
RPS3A-213ENST00000515792 SLC4A2P04920 1241 aa12.26□□□□□ -0.45
RPS3A-213ENST00000515792 APLP2Q06481 763 aa12.21□□□□□ -0.45
RPS3A-213ENST00000515792 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.15□□□□□ -0.46
RPS3A-213ENST00000515792 HNRNPUL2Q1KMD3 747 aaKnown RBP12.15□□□□□ -0.46
RPS3A-213ENST00000515792 TRHP20396 242 aaPredicted RBP12.14□□□□□ -0.47
RPS3A-213ENST00000515792 ZNF219Q9P2Y4 722 aaPredicted RBP12.14□□□□□ -0.47
RPS3A-213ENST00000515792 POTEHQ6S545 545 aa12.09□□□□□ -0.47
RPS3A-213ENST00000515792 ABCB7O75027 752 aa12.07□□□□□ -0.48
RPS3A-213ENST00000515792 SAMD1Q6SPF0 538 aaPredicted RBP12.06□□□□□ -0.48
RPS3A-213ENST00000515792 MYCNP04198 464 aaPredicted RBP11.88□□□□□ -0.51
RPS3A-213ENST00000515792 RBM42Q9BTD8 480 aaKnown RBP11.83□□□□□ -0.52
RPS3A-213ENST00000515792 SLC4A1APQ9BWU0 796 aaKnown RBP11.8□□□□□ -0.52
RPS3A-213ENST00000515792 POLA2Q14181 598 aa11.76□□□□□ -0.53
RPS3A-213ENST00000515792 FOXD4L1Q9NU39 408 aa11.65□□□□□ -0.54
RPS3A-213ENST00000515792 CHRDL2Q6WN34 429 aa11.6□□□□□ -0.55
RPS3A-213ENST00000515792 ZBTB12Q9Y330 459 aaPredicted RBP11.57□□□□□ -0.56
RPS3A-213ENST00000515792 EHMT2Q96KQ7 1210 aa11.56□□□□□ -0.56
RPS3A-213ENST00000515792 ATF5Q9Y2D1 282 aaPredicted RBP11.56□□□□□ -0.56
RPS3A-213ENST00000515792 AKT1S1Q96B36 256 aa11.5□□□□□ -0.57
RPS3A-213ENST00000515792 ZBTB22O15209 634 aa11.44□□□□□ -0.58
RPS3A-213ENST00000515792 OSCARQ8IYS5 282 aa11.4□□□□□ -0.58
RPS3A-213ENST00000515792 CSRNP3Q8WYN3 585 aa11.4□□□□□ -0.58
RPS3A-213ENST00000515792 REM2Q8IYK8 340 aaPredicted RBP11.37□□□□□ -0.59
RPS3A-213ENST00000515792 ATXN8OSP0DMR3 200 aa11.33□□□□□ -0.6
RPS3A-213ENST00000515792 PIP4P2Q8N4L2 257 aa11.28□□□□□ -0.6
RPS3A-213ENST00000515792 PITPNM1O00562 1244 aa11.25□□□□□ -0.61
RPS3A-213ENST00000515792 SP7Q8TDD2 431 aaPredicted RBP11.25□□□□□ -0.61
RPS3A-213ENST00000515792 FBLN2P98095 1184 aa11.2□□□□□ -0.62
RPS3A-213ENST00000515792 FXR2P51116 673 aaKnown RBP eCLIP11.19□□□□□ -0.62
RPS3A-213ENST00000515792 SPDYE2BA6NHP3 402 aa11.17□□□□□ -0.62
RPS3A-213ENST00000515792 SPDYE6P0CI01 402 aa11.17□□□□□ -0.62
RPS3A-213ENST00000515792 SPDYE2Q495Y8 402 aa11.17□□□□□ -0.62
RPS3A-213ENST00000515792 HAX1O00165 279 aa11.14□□□□□ -0.63
RPS3A-213ENST00000515792 MKRN4PQ13434 485 aaPredicted RBP11.03□□□□□ -0.64
RPS3A-213ENST00000515792 SPDYE1Q8NFV5 336 aaPredicted RBP11.03□□□□□ -0.64
RPS3A-213ENST00000515792 ZNF692Q9BU19 519 aaPredicted RBP11□□□□□ -0.65
RPS3A-213ENST00000515792 CLEC11AQ9Y240 323 aa10.99□□□□□ -0.65
RPS3A-213ENST00000515792 SSUH2Q9Y2M2 353 aa10.98□□□□□ -0.65
RPS3A-213ENST00000515792 PRKAR2AP13861 404 aaKnown RBP10.96□□□□□ -0.65
RPS3A-213ENST00000515792 EVX2Q03828 476 aa10.93□□□□□ -0.66
RPS3A-213ENST00000515792 C19orf67A6NJJ6 358 aa10.84□□□□□ -0.67
RPS3A-213ENST00000515792 PABPN1Q86U42 306 aaKnown RBP eCLIP10.82□□□□□ -0.68
RPS3A-213ENST00000515792 PRR29P0C7W0 189 aa10.8□□□□□ -0.68
RPS3A-213ENST00000515792 CHADLQ6NUI6 762 aa10.78□□□□□ -0.68
RPS3A-213ENST00000515792 GABBR2O75899 941 aa10.71□□□□□ -0.69
RPS3A-213ENST00000515792 FARP1Q9Y4F1 1045 aaPredicted RBP10.63□□□□□ -0.71
RPS3A-213ENST00000515792 CD44P16070 742 aaKnown RBP10.61□□□□□ -0.71
RPS3A-213ENST00000515792 LHX8Q68G74 356 aa10.55□□□□□ -0.72
RPS3A-213ENST00000515792 CLCN6P51797 869 aa10.54□□□□□ -0.72
RPS3A-213ENST00000515792 STAG3Q9UJ98 1225 aa10.52□□□□□ -0.73
RPS3A-213ENST00000515792 SPDYE4A6NLX3 237 aa10.46□□□□□ -0.73
RPS3A-213ENST00000515792 POTEIP0CG38 1075 aa10.46□□□□□ -0.73
RPS3A-213ENST00000515792 CREBZFQ9NS37 354 aa10.46□□□□□ -0.73
RPS3A-213ENST00000515792 ZNF579Q8NAF0 562 aaKnown RBP10.44□□□□□ -0.74
RPS3A-213ENST00000515792 ZRANB1Q9UGI0 708 aa10.43□□□□□ -0.74
RPS3A-213ENST00000515792 DCBLD2Q96PD2 775 aa10.41□□□□□ -0.74
RPS3A-213ENST00000515792 PAK3O75914 559 aaPredicted RBP10.35□□□□□ -0.75
RPS3A-213ENST00000515792 NPM1P06748 294 aaKnown RBP eCLIP10.31□□□□□ -0.76
RPS3A-213ENST00000515792 GALR2O43603 387 aaPredicted RBP10.3□□□□□ -0.76
RPS3A-213ENST00000515792 FKBP8Q14318 412 aa10.29□□□□□ -0.76
RPS3A-213ENST00000515792 PHF12Q96QT6 1004 aa10.27□□□□□ -0.77
RPS3A-213ENST00000515792 MNX1P50219 401 aaPredicted RBP10.24□□□□□ -0.77
RPS3A-213ENST00000515792 PROM2Q8N271 834 aa10.16□□□□□ -0.78
RPS3A-213ENST00000515792 OTUD5Q96G74 571 aa10.12□□□□□ -0.79
RPS3A-213ENST00000515792 MS4A3Q96HJ5 214 aa10.12□□□□□ -0.79
RPS3A-213ENST00000515792 PELP1Q8IZL8 1130 aaKnown RBP10.11□□□□□ -0.79
RPS3A-213ENST00000515792 POTEB2H3BUK9 544 aa10.1□□□□□ -0.79
RPS3A-213ENST00000515792 ASTLQ6HA08 431 aaPredicted RBP10.09□□□□□ -0.79
RPS3A-213ENST00000515792 TSPYL2Q9H2G4 693 aaPredicted RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms