RNA–Protein interactions for RNA: ENST00000509736.5

RPS3A-208, Transcript of ribosomal protein S3A, humanhuman

TSL 2 BASIC

Gene RPS3A, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-208ENST00000509736 AEBP2Q6ZN18 517 aaPredicted RBP20.3■□□□□ 0.84
RPS3A-208ENST00000509736 CHIC1Q5VXU3 224 aa19.13■□□□□ 0.65
RPS3A-208ENST00000509736 SENP3Q9H4L4 574 aaPredicted RBP17.19■□□□□ 0.34
RPS3A-208ENST00000509736 PHF23Q9BUL5 403 aaPredicted RBP17.04■□□□□ 0.32
RPS3A-208ENST00000509736 FOXD1Q16676 465 aa16.13■□□□□ 0.17
RPS3A-208ENST00000509736 PLPPR3Q6T4P5 718 aa15.2■□□□□ 0.02
RPS3A-208ENST00000509736 PPP6R1Q9UPN7 881 aa15.08■□□□□ 0
RPS3A-208ENST00000509736 MSH5O43196 834 aa15.01□□□□□ -0.01
RPS3A-208ENST00000509736 ADRA2BP18089 450 aa15□□□□□ -0.01
RPS3A-208ENST00000509736 PIAS4Q8N2W9 510 aaPredicted RBP14.99□□□□□ -0.01
RPS3A-208ENST00000509736 POTEDQ86YR6 584 aa14.87□□□□□ -0.03
RPS3A-208ENST00000509736 MAPK8IP2Q13387 824 aaPredicted RBP13.83□□□□□ -0.2
RPS3A-208ENST00000509736 DMRT2Q9Y5R5 561 aa13.66□□□□□ -0.22
RPS3A-208ENST00000509736 SCAF1Q9H7N4 1312 aaKnown RBP13.58□□□□□ -0.24
RPS3A-208ENST00000509736 PPP4R3CPQ6ZMV5 832 aa13.36□□□□□ -0.27
RPS3A-208ENST00000509736 HOXD11P31277 338 aaPredicted RBP13.14□□□□□ -0.31
RPS3A-208ENST00000509736 CNKSR2Q8WXI2 1034 aa13.09□□□□□ -0.31
RPS3A-208ENST00000509736 DCAF8L1A6NGE4 600 aa13.08□□□□□ -0.32
RPS3A-208ENST00000509736 RNF216Q9NWF9 866 aaPredicted RBP12.99□□□□□ -0.33
RPS3A-208ENST00000509736 CACNB1Q02641 598 aaPredicted RBP12.97□□□□□ -0.33
RPS3A-208ENST00000509736 RNF39Q9H2S5 420 aa12.86□□□□□ -0.35
RPS3A-208ENST00000509736 NCBP3Q53F19 620 aaKnown RBP12.74□□□□□ -0.37
RPS3A-208ENST00000509736 NPM3O75607 178 aaKnown RBP12.65□□□□□ -0.38
RPS3A-208ENST00000509736 C1QBPQ07021 282 aaKnown RBP12.63□□□□□ -0.39
RPS3A-208ENST00000509736 DNAJC5BQ9UF47 199 aa12.63□□□□□ -0.39
RPS3A-208ENST00000509736 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.48□□□□□ -0.415e-8■■□□□ 14.3
RPS3A-208ENST00000509736 KCNA4P22459 653 aa12.4□□□□□ -0.42
RPS3A-208ENST00000509736 U3KPZ7 1027 aaPredicted RBP12.27□□□□□ -0.45
RPS3A-208ENST00000509736 SLC4A2P04920 1241 aa12.15□□□□□ -0.46
RPS3A-208ENST00000509736 SPINK5Q9NQ38 1064 aaPredicted RBP12.14□□□□□ -0.47
RPS3A-208ENST00000509736 CAPN15O75808 1086 aa12.05□□□□□ -0.48
RPS3A-208ENST00000509736 DSG3P32926 999 aa12.04□□□□□ -0.48
RPS3A-208ENST00000509736 TRHP20396 242 aaPredicted RBP11.86□□□□□ -0.51
RPS3A-208ENST00000509736 ABCB7O75027 752 aa11.81□□□□□ -0.52
RPS3A-208ENST00000509736 SLC4A1APQ9BWU0 796 aaKnown RBP11.8□□□□□ -0.52
RPS3A-208ENST00000509736 ZNF219Q9P2Y4 722 aaPredicted RBP11.77□□□□□ -0.53
RPS3A-208ENST00000509736 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.76□□□□□ -0.53
RPS3A-208ENST00000509736 HNRNPUL2Q1KMD3 747 aaKnown RBP11.76□□□□□ -0.53
RPS3A-208ENST00000509736 APLP2Q06481 763 aa11.75□□□□□ -0.53
RPS3A-208ENST00000509736 SAMD1Q6SPF0 538 aaPredicted RBP11.73□□□□□ -0.53
RPS3A-208ENST00000509736 MYCNP04198 464 aaPredicted RBP11.64□□□□□ -0.55
RPS3A-208ENST00000509736 POTEHQ6S545 545 aa11.61□□□□□ -0.55
RPS3A-208ENST00000509736 EHMT2Q96KQ7 1210 aa11.56□□□□□ -0.56
RPS3A-208ENST00000509736 POLA2Q14181 598 aa11.54□□□□□ -0.56
RPS3A-208ENST00000509736 FOXD4L1Q9NU39 408 aa11.5□□□□□ -0.57
RPS3A-208ENST00000509736 ATF5Q9Y2D1 282 aaPredicted RBP11.5□□□□□ -0.57
RPS3A-208ENST00000509736 ZBTB22O15209 634 aa11.44□□□□□ -0.58
RPS3A-208ENST00000509736 CSRNP3Q8WYN3 585 aa11.4□□□□□ -0.58
RPS3A-208ENST00000509736 RBM42Q9BTD8 480 aaKnown RBP11.38□□□□□ -0.59
RPS3A-208ENST00000509736 CHRDL2Q6WN34 429 aa11.23□□□□□ -0.61
RPS3A-208ENST00000509736 ZBTB12Q9Y330 459 aaPredicted RBP11.18□□□□□ -0.62
RPS3A-208ENST00000509736 OSCARQ8IYS5 282 aa11.16□□□□□ -0.62
RPS3A-208ENST00000509736 AKT1S1Q96B36 256 aa11.15□□□□□ -0.62
RPS3A-208ENST00000509736 ATXN8OSP0DMR3 200 aa11.12□□□□□ -0.63
RPS3A-208ENST00000509736 REM2Q8IYK8 340 aaPredicted RBP11.09□□□□□ -0.63
RPS3A-208ENST00000509736 PIP4P2Q8N4L2 257 aa10.98□□□□□ -0.65
RPS3A-208ENST00000509736 PITPNM1O00562 1244 aa10.97□□□□□ -0.65
RPS3A-208ENST00000509736 MKRN4PQ13434 485 aaPredicted RBP10.95□□□□□ -0.66
RPS3A-208ENST00000509736 FBLN2P98095 1184 aa10.91□□□□□ -0.66
RPS3A-208ENST00000509736 FXR2P51116 673 aaKnown RBP eCLIP10.89□□□□□ -0.67
RPS3A-208ENST00000509736 SPDYE2BA6NHP3 402 aa10.88□□□□□ -0.67
RPS3A-208ENST00000509736 SPDYE6P0CI01 402 aa10.88□□□□□ -0.67
RPS3A-208ENST00000509736 SPDYE2Q495Y8 402 aa10.88□□□□□ -0.67
RPS3A-208ENST00000509736 SP7Q8TDD2 431 aaPredicted RBP10.84□□□□□ -0.67
RPS3A-208ENST00000509736 HAX1O00165 279 aa10.77□□□□□ -0.69
RPS3A-208ENST00000509736 ZNF692Q9BU19 519 aaPredicted RBP10.77□□□□□ -0.69
RPS3A-208ENST00000509736 SSUH2Q9Y2M2 353 aa10.77□□□□□ -0.69
RPS3A-208ENST00000509736 EVX2Q03828 476 aa10.74□□□□□ -0.69
RPS3A-208ENST00000509736 CLEC11AQ9Y240 323 aa10.73□□□□□ -0.69
RPS3A-208ENST00000509736 SPDYE1Q8NFV5 336 aaPredicted RBP10.71□□□□□ -0.69
RPS3A-208ENST00000509736 PRKAR2AP13861 404 aaKnown RBP10.67□□□□□ -0.7
RPS3A-208ENST00000509736 PABPN1Q86U42 306 aaKnown RBP eCLIP10.63□□□□□ -0.71
RPS3A-208ENST00000509736 CHADLQ6NUI6 762 aa10.59□□□□□ -0.71
RPS3A-208ENST00000509736 C19orf67A6NJJ6 358 aa10.54□□□□□ -0.72
RPS3A-208ENST00000509736 PRR29P0C7W0 189 aa10.53□□□□□ -0.72
RPS3A-208ENST00000509736 GABBR2O75899 941 aa10.43□□□□□ -0.74
RPS3A-208ENST00000509736 FARP1Q9Y4F1 1045 aaPredicted RBP10.38□□□□□ -0.75
RPS3A-208ENST00000509736 SPDYE4A6NLX3 237 aa10.32□□□□□ -0.76
RPS3A-208ENST00000509736 CD44P16070 742 aaKnown RBP10.32□□□□□ -0.76
RPS3A-208ENST00000509736 CREBZFQ9NS37 354 aa10.31□□□□□ -0.76
RPS3A-208ENST00000509736 FKBP8Q14318 412 aa10.29□□□□□ -0.76
RPS3A-208ENST00000509736 POTEIP0CG38 1075 aa10.26□□□□□ -0.77
RPS3A-208ENST00000509736 STAG3Q9UJ98 1225 aa10.24□□□□□ -0.77
RPS3A-208ENST00000509736 LHX8Q68G74 356 aa10.18□□□□□ -0.78
RPS3A-208ENST00000509736 ZRANB1Q9UGI0 708 aa10.17□□□□□ -0.78
RPS3A-208ENST00000509736 ZNF579Q8NAF0 562 aaKnown RBP10.15□□□□□ -0.78
RPS3A-208ENST00000509736 MNX1P50219 401 aaPredicted RBP10.14□□□□□ -0.79
RPS3A-208ENST00000509736 CLCN6P51797 869 aa10.11□□□□□ -0.79
RPS3A-208ENST00000509736 GALR2O43603 387 aaPredicted RBP10.09□□□□□ -0.79
RPS3A-208ENST00000509736 PROM2Q8N271 834 aa10.09□□□□□ -0.79
RPS3A-208ENST00000509736 DCBLD2Q96PD2 775 aa10.07□□□□□ -0.8
RPS3A-208ENST00000509736 PHF12Q96QT6 1004 aa10.06□□□□□ -0.8
RPS3A-208ENST00000509736 NPM1P06748 294 aaKnown RBP eCLIP10.02□□□□□ -0.81
RPS3A-208ENST00000509736 PAK3O75914 559 aaPredicted RBP9.99□□□□□ -0.81
RPS3A-208ENST00000509736 PELP1Q8IZL8 1130 aaKnown RBP9.94□□□□□ -0.82
RPS3A-208ENST00000509736 POTEB2H3BUK9 544 aa9.93□□□□□ -0.82
RPS3A-208ENST00000509736 MS4A3Q96HJ5 214 aa9.91□□□□□ -0.82
RPS3A-208ENST00000509736 TSPYL2Q9H2G4 693 aaPredicted RBP9.91□□□□□ -0.82
RPS3A-208ENST00000509736 CCDC61Q9Y6R9 512 aa9.87□□□□□ -0.83
RPS3A-208ENST00000509736 MIER1Q8N108 512 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms