RNA–Protein interactions for RNA: ENST00000514682.5

RPS3A-212, Transcript of ribosomal protein S3A, humanhuman

TSL 5 BASIC

Gene RPS3A, Length 985 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-212ENST00000514682 NISCHQ9Y2I1 1504 aa40.12■■■■■ 4.01
RPS3A-212ENST00000514682 CCDC180Q9P1Z9 1646 aa35.72■■■■□ 3.31
RPS3A-212ENST00000514682 ABCC9O60706 1549 aa34.93■■■■□ 3.18
RPS3A-212ENST00000514682 RB1CC1Q8TDY2 1594 aa33.61■■■□□ 2.97
RPS3A-212ENST00000514682 NACADO15069 1562 aa33.56■■■□□ 2.96
RPS3A-212ENST00000514682 ZCCHC6Q5VYS8 1495 aaKnown RBP33.46■■■□□ 2.95
RPS3A-212ENST00000514682 DCAF8L2P0C7V8 631 aa33.43■■■□□ 2.94
RPS3A-212ENST00000514682 MYO15BQ96JP2 1530 aa33.36■■■□□ 2.93
RPS3A-212ENST00000514682 DCAF1Q9Y4B6 1507 aa33.21■■■□□ 2.91
RPS3A-212ENST00000514682 UNC13AQ9UPW8 1703 aa32.81■■■□□ 2.84
RPS3A-212ENST00000514682 SCRIBQ14160 1630 aa32.59■■■□□ 2.81
RPS3A-212ENST00000514682 BICRAQ9NZM4 1560 aa32.58■■■□□ 2.81
RPS3A-212ENST00000514682 PABPN1Q86U42 306 aaKnown RBP eCLIP32.58■■■□□ 2.81
RPS3A-212ENST00000514682 SHROOM4Q9ULL8 1493 aa32.29■■■□□ 2.76
RPS3A-212ENST00000514682 DNAJC5BQ9UF47 199 aa31.99■■■□□ 2.71
RPS3A-212ENST00000514682 EIF4G1Q04637 1599 aaKnown RBP31.73■■■□□ 2.67
RPS3A-212ENST00000514682 CC2D2AQ9P2K1 1620 aa31.6■■■□□ 2.65
RPS3A-212ENST00000514682 CECR2Q9BXF3 1484 aa31.4■■■□□ 2.62
RPS3A-212ENST00000514682 SMARCA4P51532 1647 aa31.16■■■□□ 2.58
RPS3A-212ENST00000514682 BAZ1AQ9NRL2 1556 aaPredicted RBP31.12■■■□□ 2.57
RPS3A-212ENST00000514682 ATAD2BQ9ULI0 1458 aa30.97■■■□□ 2.55
RPS3A-212ENST00000514682 SMARCA2P51531 1590 aa30.96■■■□□ 2.55
RPS3A-212ENST00000514682 NCAPD3P42695 1498 aa30.95■■■□□ 2.54
RPS3A-212ENST00000514682 MROH2BQ7Z745 1585 aa30.92■■■□□ 2.54
RPS3A-212ENST00000514682 PEG3Q9GZU2 1588 aa30.85■■■□□ 2.53
RPS3A-212ENST00000514682 HMGXB3Q12766 1538 aa30.84■■■□□ 2.53
RPS3A-212ENST00000514682 BAZ1BQ9UIG0 1483 aaKnown RBP30.74■■■□□ 2.51
RPS3A-212ENST00000514682 WIZO95785 1651 aa30.57■■■□□ 2.48
RPS3A-212ENST00000514682 RSF1Q96T23 1441 aaPredicted RBP30.55■■■□□ 2.48
RPS3A-212ENST00000514682 TOP2AP11388 1531 aaKnown RBP30.3■■■□□ 2.44
RPS3A-212ENST00000514682 NESP48681 1621 aa30.22■■■□□ 2.43
RPS3A-212ENST00000514682 LAMC3Q9Y6N6 1575 aa30.15■■■□□ 2.42
RPS3A-212ENST00000514682 ERCC6Q03468 1493 aa30.13■■■□□ 2.41
RPS3A-212ENST00000514682 CADPSQ9ULU8 1353 aa30.03■■■□□ 2.4
RPS3A-212ENST00000514682 PDS5BQ9NTI5 1447 aa29.94■■■□□ 2.38
RPS3A-212ENST00000514682 CCDC88BA6NC98 1476 aa29.88■■■□□ 2.37
RPS3A-212ENST00000514682 CFTRP13569 1480 aa29.87■■■□□ 2.37
RPS3A-212ENST00000514682 KIF21AQ7Z4S6 1674 aa29.87■■■□□ 2.37
RPS3A-212ENST00000514682 CUX2O14529 1486 aa29.82■■■□□ 2.36
RPS3A-212ENST00000514682 THOC2Q8NI27 1593 aaKnown RBP29.81■■■□□ 2.36
RPS3A-212ENST00000514682 FANCD2Q9BXW9 1451 aa29.72■■■□□ 2.35
RPS3A-212ENST00000514682 SUPT5HO00267 1087 aaKnown RBP29.71■■■□□ 2.35
RPS3A-212ENST00000514682 CEP164Q9UPV0 1460 aa29.71■■■□□ 2.35
RPS3A-212ENST00000514682 MRC2Q9UBG0 1479 aa29.67■■■□□ 2.34
RPS3A-212ENST00000514682 PRDM2Q13029 1718 aa29.66■■■□□ 2.34
RPS3A-212ENST00000514682 WDR62O43379 1518 aa29.58■■■□□ 2.33
RPS3A-212ENST00000514682 URB2Q14146 1524 aaKnown RBP29.43■■■□□ 2.3
RPS3A-212ENST00000514682 TOPBP1Q92547 1522 aa29.25■■■□□ 2.27
RPS3A-212ENST00000514682 DNMBPQ6XZF7 1577 aa29.23■■■□□ 2.27
RPS3A-212ENST00000514682 ABCC8Q09428 1581 aa29.22■■■□□ 2.27
RPS3A-212ENST00000514682 IFT140Q96RY7 1462 aa29.08■■■□□ 2.25
RPS3A-212ENST00000514682 CUX1P39880 1505 aa29.03■■■□□ 2.24
RPS3A-212ENST00000514682 POLA1P09884 1462 aaPredicted RBP29■■■□□ 2.23
RPS3A-212ENST00000514682 FGD5Q6ZNL6 1462 aa28.93■■■□□ 2.22
RPS3A-212ENST00000514682 TARBP1Q13395 1621 aaKnown RBP28.93■■■□□ 2.22
RPS3A-212ENST00000514682 ZNF608Q9ULD9 1512 aaPredicted RBP28.93■■■□□ 2.22
RPS3A-212ENST00000514682 EIF4G3O43432 1585 aaKnown RBP28.86■■■□□ 2.21
RPS3A-212ENST00000514682 RAD54L2Q9Y4B4 1467 aa28.85■■■□□ 2.21
RPS3A-212ENST00000514682 SOGA1O94964 1423 aa28.84■■■□□ 2.21
RPS3A-212ENST00000514682 DNAJC5Q9H3Z4 198 aa28.83■■■□□ 2.21
RPS3A-212ENST00000514682 WRNQ14191 1432 aaPredicted RBP eCLIP28.82■■■□□ 2.2
RPS3A-212ENST00000514682 TOP2BQ02880 1626 aa28.77■■■□□ 2.2
RPS3A-212ENST00000514682 BIVM-ERCC5R4GMW8 1640 aa28.77■■■□□ 2.2
RPS3A-212ENST00000514682 SYNJ1O43426 1573 aa28.77■■■□□ 2.2
RPS3A-212ENST00000514682 AQRO60306 1485 aaKnown RBP eCLIP28.74■■■□□ 2.192e-9■■■■■ 47.7
RPS3A-212ENST00000514682 WDR97A6NE52 1622 aa28.72■■■□□ 2.19
RPS3A-212ENST00000514682 TDRD9Q8NDG6 1382 aaKnown RBP28.67■■■□□ 2.18
RPS3A-212ENST00000514682 ABCA10Q8WWZ4 1543 aa28.64■■■□□ 2.18
RPS3A-212ENST00000514682 ABCA5Q8WWZ7 1642 aa28.56■■■□□ 2.16
RPS3A-212ENST00000514682 GRIN2BQ13224 1484 aa28.54■■■□□ 2.16
RPS3A-212ENST00000514682 GAPVD1Q14C86 1478 aa28.53■■■□□ 2.16
RPS3A-212ENST00000514682 SNAPC4Q5SXM2 1469 aa28.53■■■□□ 2.16
RPS3A-212ENST00000514682 PBRM1Q86U86 1689 aa28.5■■■□□ 2.15
RPS3A-212ENST00000514682 OSCARQ8IYS5 282 aa28.49■■■□□ 2.15
RPS3A-212ENST00000514682 MAGI1Q96QZ7 1491 aaPredicted RBP28.48■■■□□ 2.15
RPS3A-212ENST00000514682 CHD1O14646 1710 aa28.46■■■□□ 2.15
RPS3A-212ENST00000514682 FBLN2P98095 1184 aa28.37■■■□□ 2.13
RPS3A-212ENST00000514682 SYNJ2O15056 1496 aa28.36■■■□□ 2.13
RPS3A-212ENST00000514682 ADAMTS12P58397 1594 aa28.31■■■□□ 2.12
RPS3A-212ENST00000514682 ERICH3Q5RHP9 1530 aa28.3■■■□□ 2.12
RPS3A-212ENST00000514682 CHMP7Q8WUX9 453 aaPredicted RBP28.29■■■□□ 2.12
RPS3A-212ENST00000514682 KIF27Q86VH2 1401 aa28.22■■■□□ 2.11
RPS3A-212ENST00000514682 FHAD1B1AJZ9 1412 aa28.21■■■□□ 2.11
RPS3A-212ENST00000514682 GRIN2AQ12879 1464 aa28.19■■■□□ 2.1
RPS3A-212ENST00000514682 CLASP1Q7Z460 1538 aa28.18■■■□□ 2.1
RPS3A-212ENST00000514682 ARHGEF11O15085 1522 aa28.12■■■□□ 2.09
RPS3A-212ENST00000514682 RIMBP3CA6NJZ7 1639 aa28.11■■■□□ 2.09
RPS3A-212ENST00000514682 RIMBP3BA6NNM3 1639 aa28.11■■■□□ 2.09
RPS3A-212ENST00000514682 RIMBP3Q9UFD9 1639 aa28.11■■■□□ 2.09
RPS3A-212ENST00000514682 CUL7Q14999 1698 aa28.07■■■□□ 2.08
RPS3A-212ENST00000514682 TRIM41Q8WV44 630 aa28.06■■■□□ 2.08
RPS3A-212ENST00000514682 NUP160Q12769 1436 aa28.06■■■□□ 2.08
RPS3A-212ENST00000514682 IGF1RP08069 1367 aa28.05■■■□□ 2.08
RPS3A-212ENST00000514682 CEP170Q5SW79 1584 aa28.05■■■□□ 2.08
RPS3A-212ENST00000514682 RUSC2Q8N2Y8 1516 aa27.92■■■□□ 2.06
RPS3A-212ENST00000514682 CARMIL1Q5VZK9 1371 aa27.9■■■□□ 2.06
RPS3A-212ENST00000514682 ARAP1Q96P48 1450 aa27.89■■■□□ 2.06
RPS3A-212ENST00000514682 SHROOM2Q13796 1616 aa27.85■■■□□ 2.05
RPS3A-212ENST00000514682 CYB5RLQ6IPT4 315 aa27.77■■■□□ 2.04
RPS3A-212ENST00000514682 ERCC6L2Q5T890 1561 aa27.77■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms