Protein–RNA interactions for Protein: P25336

MSH3, DNA mismatch repair protein MSH3, yeastyeast

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH3P25336 GCY1YOR120W 939 nt4.92□□□□□ -1.62
MSH3P25336 DCS2YOR173W 1062 nt4.92□□□□□ -1.62
MSH3P25336 SEC66YBR171W 621 nt4.92□□□□□ -1.62
MSH3P25336 YPL109CYPL109C 1974 nt4.92□□□□□ -1.62
MSH3P25336 SAT4YCR008W 1812 nt4.92□□□□□ -1.62
MSH3P25336 ORC6YHR118C 1308 nt4.92□□□□□ -1.62
MSH3P25336 SBE2YDR351W 2595 nt4.92□□□□□ -1.62
MSH3P25336 CWC2YDL209C 1020 nt4.91□□□□□ -1.62
MSH3P25336 COX13YGL191W 390 nt4.91□□□□□ -1.62
MSH3P25336 RPS1BYML063W 768 nt4.91□□□□□ -1.62
MSH3P25336 DSL1YNL258C 2265 nt4.91□□□□□ -1.62
MSH3P25336 MSM1YGR171C 1728 nt4.91□□□□□ -1.62
MSH3P25336 UBP10YNL186W 2379 nt4.91□□□□□ -1.62
MSH3P25336 PIM1YBL022C 3402 nt4.91□□□□□ -1.62
MSH3P25336 GAD1YMR250W 1758 nt4.91□□□□□ -1.62
MSH3P25336 SLY41YOR307C 1362 nt4.91□□□□□ -1.62
MSH3P25336 MET4YNL103W 2019 nt4.9□□□□□ -1.62
MSH3P25336 YCR064CYCR064C 411 nt4.9□□□□□ -1.63
MSH3P25336 YPD1YDL235C 504 nt4.9□□□□□ -1.63
MSH3P25336 RPA14YDR156W 414 nt4.9□□□□□ -1.63
MSH3P25336 YEL053W-AYEL053W-A 348 nt4.9□□□□□ -1.63
MSH3P25336 YIL024CYIL024C 570 nt4.9□□□□□ -1.63
MSH3P25336 YET1YKL065C 621 nt4.9□□□□□ -1.63
MSH3P25336 ENV10YLR065C 546 nt4.9□□□□□ -1.63
MSH3P25336 HRI1YLR301W 735 nt4.9□□□□□ -1.63
MSH3P25336 ECM15YBL001C 315 nt4.9□□□□□ -1.63
MSH3P25336 BER1YLR412W 825 nt4.9□□□□□ -1.63
MSH3P25336 YBR016WYBR016W 387 nt4.9□□□□□ -1.63
MSH3P25336 APD1YBR151W 951 nt4.9□□□□□ -1.63
MSH3P25336 AVT5YBL089W 1380 nt4.9□□□□□ -1.63
MSH3P25336 TPD3YAL016W 1908 nt4.89□□□□□ -1.63
MSH3P25336 PRM1YNL279W 1986 nt4.89□□□□□ -1.63
MSH3P25336 PER1YCR044C 1074 nt4.89□□□□□ -1.63
MSH3P25336 BUR2YLR226W 1188 nt4.89□□□□□ -1.63
MSH3P25336 ARC18YLR370C 537 nt4.89□□□□□ -1.63
MSH3P25336 ATP18YML081C-A 180 nt4.89□□□□□ -1.63
MSH3P25336 YML099W-AYML099W-A 330 nt4.89□□□□□ -1.63
MSH3P25336 RPS19AYOL121C 435 nt4.89□□□□□ -1.63
MSH3P25336 NEL1YHR035W 1893 nt4.89□□□□□ -1.63
MSH3P25336 SKM1YOL113W 1968 nt4.89□□□□□ -1.63
MSH3P25336 VHS3YOR054C 2025 nt4.89□□□□□ -1.63
MSH3P25336 HOS3YPL116W 2094 nt4.88□□□□□ -1.63
MSH3P25336 NUG1YER006W 1563 nt4.88□□□□□ -1.63
MSH3P25336 SDS23YGL056C 1584 nt4.88□□□□□ -1.63
MSH3P25336 DBP3YGL078C 1572 nt4.88□□□□□ -1.63
MSH3P25336 tS(AGA)D3tS(AGA)D3 83 nt4.88□□□□□ -1.63
MSH3P25336 YKL065W-AYKL065W-A 222 nt4.88□□□□□ -1.63
MSH3P25336 YLR297WYLR297W 390 nt4.88□□□□□ -1.63
MSH3P25336 YML084WYML084W 309 nt4.88□□□□□ -1.63
MSH3P25336 YOR379CYOR379C 339 nt4.88□□□□□ -1.63
MSH3P25336 PIN3YPR154W 648 nt4.88□□□□□ -1.63
MSH3P25336 PHO87YCR037C 2772 nt4.88□□□□□ -1.63
MSH3P25336 CTM1YHR109W 1758 nt4.88□□□□□ -1.63
MSH3P25336 MDM30YLR368W 1797 nt4.88□□□□□ -1.63
MSH3P25336 PRS5YOL061W 1491 nt4.88□□□□□ -1.63
MSH3P25336 VPS33YLR396C 2076 nt4.87□□□□□ -1.63
MSH3P25336 ATM1YMR301C 2073 nt4.87□□□□□ -1.63
MSH3P25336 snR7-SsnR7-S 179 nt4.87□□□□□ -1.63
MSH3P25336 YER119C-AYER119C-A 372 nt4.87□□□□□ -1.63
MSH3P25336 RPL9AYGL147C 576 nt4.87□□□□□ -1.63
MSH3P25336 RPL8AYHL033C 771 nt4.87□□□□□ -1.63
MSH3P25336 YHL048C-AYHL048C-A 135 nt4.87□□□□□ -1.63
MSH3P25336 YIL115W-AYIL115W-A 372 nt4.87□□□□□ -1.63
MSH3P25336 SDL1YIL167W 633 nt4.87□□□□□ -1.63
MSH3P25336 YLR290CYLR290C 834 nt4.87□□□□□ -1.63
MSH3P25336 YAR075WYAR075W 474 nt4.87□□□□□ -1.63
MSH3P25336 YNR034W-AYNR034W-A 297 nt4.87□□□□□ -1.63
MSH3P25336 REI1YBR267W 1182 nt4.87□□□□□ -1.63
MSH3P25336 XKS1YGR194C 1803 nt4.87□□□□□ -1.63
MSH3P25336 YJL049WYJL049W 1353 nt4.87□□□□□ -1.63
MSH3P25336 CTR86YCR054C 1692 nt4.86□□□□□ -1.63
MSH3P25336 SEC27YGL137W 2670 nt4.86□□□□□ -1.63
MSH3P25336 YHR182C-AYHR182C-A 474 nt4.86□□□□□ -1.63
MSH3P25336 YIL021C-AYIL021C-A 270 nt4.86□□□□□ -1.63
MSH3P25336 YNK1YKL067W 462 nt4.86□□□□□ -1.63
MSH3P25336 YMR105W-AYMR105W-A 195 nt4.86□□□□□ -1.63
MSH3P25336 YOR186WYOR186W 435 nt4.86□□□□□ -1.63
MSH3P25336 YOR293C-AYOR293C-A 150 nt4.86□□□□□ -1.63
MSH3P25336 SUS1YBR111W-A 291 nt4.86□□□□□ -1.63
MSH3P25336 snR41snR41 95 nt4.86□□□□□ -1.63
MSH3P25336 KIN3YAR018C 1308 nt4.86□□□□□ -1.63
MSH3P25336 SMP3YOR149C 1551 nt4.86□□□□□ -1.63
MSH3P25336 YLR152CYLR152C 1731 nt4.86□□□□□ -1.63
MSH3P25336 YPK9YOR291W 4419 nt4.86□□□□□ -1.63
MSH3P25336 ARP5YNL059C 2268 nt4.85□□□□□ -1.63
MSH3P25336 GAL11YOL051W 3246 nt4.85□□□□□ -1.63
MSH3P25336 LPP1YDR503C 825 nt4.85□□□□□ -1.63
MSH3P25336 SEC4YFL005W 648 nt4.85□□□□□ -1.63
MSH3P25336 YMR173W-AYMR173W-A 1185 nt4.85□□□□□ -1.63
MSH3P25336 YOR248WYOR248W 303 nt4.85□□□□□ -1.63
MSH3P25336 YMR221CYMR221C 1515 nt4.85□□□□□ -1.63
MSH3P25336 YBP2YGL060W 1926 nt4.85□□□□□ -1.63
MSH3P25336 PMC1YGL006W 3522 nt4.85□□□□□ -1.63
MSH3P25336 ANR2YKL047W 1551 nt4.84□□□□□ -1.63
MSH3P25336 SNU56YDR240C 1479 nt4.84□□□□□ -1.63
MSH3P25336 YDR269CYDR269C 324 nt4.84□□□□□ -1.63
MSH3P25336 NCB2YDR397C 441 nt4.84□□□□□ -1.63
MSH3P25336 BNA7YDR428C 786 nt4.84□□□□□ -1.63
MSH3P25336 VAB2YEL005C 849 nt4.84□□□□□ -1.63
MSH3P25336 YER175W-AYER175W-A 165 nt4.84□□□□□ -1.63
Retrieved 100 of 7,029 protein–RNA pairs in 35 ms