RNA–Protein interactions for RNA: YGL078C

DBP3, Transcript of RNA-Dependent ATPase, member of DExD/H-box family, yeastyeast

Gene DBP3, Length 1,572 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DBP3YGL078C MTC1P47018 478 aaKnown RBP10.98□□□□□ -0.65
DBP3YGL078C DRS1P32892 752 aaKnown RBP10.95□□□□□ -0.66
DBP3YGL078C BFR2Q06631 534 aaKnown RBP9.44□□□□□ -0.9
DBP3YGL078C DIP2Q12220 943 aaPredicted RBP9.35□□□□□ -0.91
DBP3YGL078C FAP1P53971 965 aa9.18□□□□□ -0.94
DBP3YGL078C AVT3P36062 692 aa9.16□□□□□ -0.94
DBP3YGL078C ISW2Q08773 1120 aa8.99□□□□□ -0.97
DBP3YGL078C RSE1Q04693 1361 aaKnown RBP8.87□□□□□ -0.99
DBP3YGL078C PRI1P10363 409 aa8.86□□□□□ -0.99
DBP3YGL078C RPG1P38249 964 aaKnown RBP8.86□□□□□ -0.99
DBP3YGL078C TFA1P36100 482 aa8.78□□□□□ -1
DBP3YGL078C AAD16Q02895 342 aa8.75□□□□□ -1.01
DBP3YGL078C PRY3P47033 881 aa8.57□□□□□ -1.04
DBP3YGL078C RPL17AP05740 184 aaKnown RBP8.53□□□□□ -1.04
DBP3YGL078C RPL17BP46990 184 aaKnown RBP8.53□□□□□ -1.04
DBP3YGL078C REB1P21538 810 aa8.47□□□□□ -1.05
DBP3YGL078C TSR3Q12094 313 aaKnown RBP8.44□□□□□ -1.06
DBP3YGL078C SPT21P35209 758 aa8.15□□□□□ -1.1
DBP3YGL078C MRPL32P25348 183 aa8.14□□□□□ -1.11
DBP3YGL078C HAA1Q12753 694 aaKnown RBP8.09□□□□□ -1.11
DBP3YGL078C RIM101P33400 625 aa8.05□□□□□ -1.12
DBP3YGL078C YCK3P39962 524 aa8□□□□□ -1.13
DBP3YGL078C YKR023WP36119 530 aaKnown RBP7.93□□□□□ -1.14
DBP3YGL078C HOP09932 586 aa7.8□□□□□ -1.16
DBP3YGL078C CDC27P38042 758 aa7.78□□□□□ -1.16
DBP3YGL078C TFC8Q12308 588 aa7.78□□□□□ -1.16
DBP3YGL078C OXP1P28273 1286 aa7.77□□□□□ -1.17
DBP3YGL078C YIL055CP40523 627 aaKnown RBP7.76□□□□□ -1.17
DBP3YGL078C PTP3P40048 928 aa7.75□□□□□ -1.17
DBP3YGL078C DCD1P06773 312 aa7.72□□□□□ -1.17
DBP3YGL078C YAH1Q12184 172 aaKnown RBP7.71□□□□□ -1.18
DBP3YGL078C SSP1P38871 571 aa7.67□□□□□ -1.18
DBP3YGL078C YGL015CP33199 130 aa7.61□□□□□ -1.19
DBP3YGL078C ARP8Q12386 881 aaKnown RBP RIP-Chip data7.6□□□□□ -1.19not detected
DBP3YGL078C RSM7P47150 247 aa7.59□□□□□ -1.19
DBP3YGL078C YLR271WQ06152 274 aa7.56□□□□□ -1.2
DBP3YGL078C BCH2P36122 765 aa7.55□□□□□ -1.2
DBP3YGL078C UBP10P53874 792 aaPredicted RBP7.51□□□□□ -1.21
DBP3YGL078C MAP2P38174 421 aaKnown RBP7.49□□□□□ -1.21
DBP3YGL078C AI2P03876 854 aa7.47□□□□□ -1.21
DBP3YGL078C SCY1P53009 804 aa7.47□□□□□ -1.21
DBP3YGL078C BBC1P47068 1157 aa7.46□□□□□ -1.21
DBP3YGL078C EPS1P40557 701 aa7.43□□□□□ -1.22
DBP3YGL078C RQC2Q12532 1038 aaKnown RBP7.42□□□□□ -1.22
DBP3YGL078C MGA2P40578 1113 aa7.42□□□□□ -1.22
DBP3YGL078C BDF1P35817 686 aa7.37□□□□□ -1.23
DBP3YGL078C PSD2P53037 1138 aaKnown RBP7.37□□□□□ -1.23
DBP3YGL078C SLX5P32828 619 aaKnown RBP7.35□□□□□ -1.23
DBP3YGL078C CST9Q06032 482 aa7.33□□□□□ -1.24
DBP3YGL078C TIF4632P39936 914 aaKnown RBP7.25□□□□□ -1.25
DBP3YGL078C MRM1P25270 412 aa7.24□□□□□ -1.25
DBP3YGL078C DMA1P38823 416 aa7.2□□□□□ -1.26
DBP3YGL078C TGL3P40308 642 aa7.16□□□□□ -1.26
DBP3YGL078C RTG3P38165 486 aa7.15□□□□□ -1.27
DBP3YGL078C RCR1P38212 213 aa7.08□□□□□ -1.28
DBP3YGL078C RAM2P29703 316 aa7.03□□□□□ -1.28
DBP3YGL078C NSR1P27476 414 aaKnown RBP RIP-Chip data7.03□□□□□ -1.28not detected
DBP3YGL078C VPS29P38759 282 aa7.03□□□□□ -1.28
DBP3YGL078C YAP5P40574 245 aa7.03□□□□□ -1.28
DBP3YGL078C YMR1P47147 688 aaKnown RBP RIP-Chip data7.02□□□□□ -1.29not detected
DBP3YGL078C YOR238WQ08634 303 aa6.99□□□□□ -1.29
DBP3YGL078C MAK11P20484 414 aaKnown RBP6.97□□□□□ -1.29
DBP3YGL078C DBP1P24784 617 aaKnown RBP6.96□□□□□ -1.29
DBP3YGL078C YFR006WP43590 535 aa6.95□□□□□ -1.3
DBP3YGL078C STS1P38637 319 aa6.94□□□□□ -1.3
DBP3YGL078C PIB1Q06651 286 aa6.94□□□□□ -1.3
DBP3YGL078C BUD31P25337 157 aaPredicted RBP6.93□□□□□ -1.3
DBP3YGL078C SET1P38827 1080 aaKnown RBP6.91□□□□□ -1.3
DBP3YGL078C MST1P07236 462 aa6.9□□□□□ -1.31
DBP3YGL078C MIF2P35201 549 aa6.88□□□□□ -1.31
DBP3YGL078C GTT3P39996 337 aa6.88□□□□□ -1.31
DBP3YGL078C COQ8P27697 501 aa6.86□□□□□ -1.31
DBP3YGL078C VMA1P17255 1071 aaKnown RBP6.83□□□□□ -1.32
DBP3YGL078C IFH1P39520 1085 aa6.82□□□□□ -1.32
DBP3YGL078C SAS10Q12136 610 aaPredicted RBP6.82□□□□□ -1.32
DBP3YGL078C NOP53Q12080 455 aaKnown RBP6.81□□□□□ -1.32
DBP3YGL078C EDS1P38073 919 aa6.79□□□□□ -1.32
DBP3YGL078C UBP9P39967 754 aa6.78□□□□□ -1.32
DBP3YGL078C PTC3P34221 468 aaKnown RBP6.78□□□□□ -1.32
DBP3YGL078C VPS70P47161 811 aa6.75□□□□□ -1.33
DBP3YGL078C YPR148CQ06523 435 aa6.75□□□□□ -1.33
DBP3YGL078C SAM3Q08986 587 aa6.75□□□□□ -1.33
DBP3YGL078C WSC3Q12215 556 aa6.75□□□□□ -1.33
DBP3YGL078C ATH1P48016 1211 aa6.74□□□□□ -1.33
DBP3YGL078C GRE2Q12068 342 aaKnown RBP6.74□□□□□ -1.33
DBP3YGL078C GYP5Q12344 894 aa6.73□□□□□ -1.33
DBP3YGL078C YOL036WQ08206 761 aa6.72□□□□□ -1.33
DBP3YGL078C YBL029C-AQ3E756 94 aa6.72□□□□□ -1.33
DBP3YGL078C SET4P42948 560 aa6.71□□□□□ -1.34
DBP3YGL078C CKB1P43639 278 aa6.71□□□□□ -1.34
DBP3YGL078C MSB4Q12317 492 aa6.7□□□□□ -1.34
DBP3YGL078C ABP1P15891 592 aaKnown RBP6.69□□□□□ -1.34
DBP3YGL078C GUT1P32190 709 aa6.69□□□□□ -1.34
DBP3YGL078C VNX1P42839 908 aa6.67□□□□□ -1.34
DBP3YGL078C EAP1P36041 632 aaKnown RBP6.66□□□□□ -1.34
DBP3YGL078C DCW1P36091 449 aa6.66□□□□□ -1.34
DBP3YGL078C SPP1Q03012 353 aa6.65□□□□□ -1.34
DBP3YGL078C HTA1P04911 132 aaKnown RBP6.65□□□□□ -1.35
DBP3YGL078C HTA2P04912 132 aa6.65□□□□□ -1.35
DBP3YGL078C SPB4P25808 606 aaPredicted RBP6.65□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 25.3 ms