Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
VCX3BQ9H321 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VCX3BQ9H321 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VCX3BQ9H321 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VCX3BQ9H321 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VCX3BQ9H321 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VCX3BQ9H321 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.22■□□□□ 0.83
VCX3BQ9H321 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VCX3BQ9H321 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.22■□□□□ 0.83
VCX3BQ9H321 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
VCX3BQ9H321 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.22■□□□□ 0.83
VCX3BQ9H321 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.22■□□□□ 0.83
VCX3BQ9H321 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VCX3BQ9H321 AC104564.3-201ENST00000582367 638 ntBASIC20.22■□□□□ 0.83
VCX3BQ9H321 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
VCX3BQ9H321 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
VCX3BQ9H321 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VCX3BQ9H321 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.22■□□□□ 0.83
VCX3BQ9H321 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.22■□□□□ 0.83
VCX3BQ9H321 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
VCX3BQ9H321 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.22■□□□□ 0.83
VCX3BQ9H321 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
VCX3BQ9H321 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
VCX3BQ9H321 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
VCX3BQ9H321 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
VCX3BQ9H321 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
VCX3BQ9H321 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
VCX3BQ9H321 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.21■□□□□ 0.83
VCX3BQ9H321 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
VCX3BQ9H321 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.21■□□□□ 0.83
VCX3BQ9H321 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
VCX3BQ9H321 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
VCX3BQ9H321 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
VCX3BQ9H321 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
VCX3BQ9H321 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
VCX3BQ9H321 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
VCX3BQ9H321 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.2■□□□□ 0.82
VCX3BQ9H321 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
VCX3BQ9H321 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
VCX3BQ9H321 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VCX3BQ9H321 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
VCX3BQ9H321 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.2■□□□□ 0.82
VCX3BQ9H321 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VCX3BQ9H321 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
VCX3BQ9H321 AC087289.5-201ENST00000586076 3175 ntBASIC20.2■□□□□ 0.82
VCX3BQ9H321 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VCX3BQ9H321 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
VCX3BQ9H321 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VCX3BQ9H321 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
VCX3BQ9H321 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VCX3BQ9H321 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VCX3BQ9H321 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
VCX3BQ9H321 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VCX3BQ9H321 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
VCX3BQ9H321 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
VCX3BQ9H321 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.19■□□□□ 0.82
VCX3BQ9H321 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
VCX3BQ9H321 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
VCX3BQ9H321 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
VCX3BQ9H321 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
VCX3BQ9H321 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
VCX3BQ9H321 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
VCX3BQ9H321 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.19■□□□□ 0.82
VCX3BQ9H321 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
VCX3BQ9H321 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
VCX3BQ9H321 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
VCX3BQ9H321 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.19■□□□□ 0.82
VCX3BQ9H321 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
VCX3BQ9H321 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
VCX3BQ9H321 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
VCX3BQ9H321 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.19■□□□□ 0.82
VCX3BQ9H321 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
VCX3BQ9H321 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
VCX3BQ9H321 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.19■□□□□ 0.82
VCX3BQ9H321 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
VCX3BQ9H321 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.19■□□□□ 0.82
VCX3BQ9H321 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
VCX3BQ9H321 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
VCX3BQ9H321 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
VCX3BQ9H321 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.18■□□□□ 0.82
VCX3BQ9H321 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
VCX3BQ9H321 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
VCX3BQ9H321 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
VCX3BQ9H321 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
VCX3BQ9H321 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
VCX3BQ9H321 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
VCX3BQ9H321 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.18■□□□□ 0.82
VCX3BQ9H321 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
VCX3BQ9H321 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
VCX3BQ9H321 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
VCX3BQ9H321 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
VCX3BQ9H321 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
VCX3BQ9H321 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
VCX3BQ9H321 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
VCX3BQ9H321 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
VCX3BQ9H321 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.17■□□□□ 0.82
VCX3BQ9H321 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
VCX3BQ9H321 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
VCX3BQ9H321 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
VCX3BQ9H321 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms