Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC30.3■■■□□ 2.44
LTBP4Q8N2S1 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
LTBP4Q8N2S1 AL590326.2-201ENST00000625139 305 ntBASIC30.3■■■□□ 2.44
LTBP4Q8N2S1 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC30.3■■■□□ 2.44
LTBP4Q8N2S1 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC30.3■■■□□ 2.44
LTBP4Q8N2S1 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC30.3■■■□□ 2.44
LTBP4Q8N2S1 KRT17P1-201ENST00000399211 1546 ntBASIC30.3■■■□□ 2.44
LTBP4Q8N2S1 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC30.3■■■□□ 2.44
LTBP4Q8N2S1 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
LTBP4Q8N2S1 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
LTBP4Q8N2S1 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC30.3■■■□□ 2.44
LTBP4Q8N2S1 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC30.3■■■□□ 2.44
LTBP4Q8N2S1 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC30.29■■■□□ 2.44
LTBP4Q8N2S1 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC30.29■■■□□ 2.44
LTBP4Q8N2S1 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC30.29■■■□□ 2.44
LTBP4Q8N2S1 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
LTBP4Q8N2S1 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
LTBP4Q8N2S1 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC30.29■■■□□ 2.44
LTBP4Q8N2S1 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
LTBP4Q8N2S1 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC30.29■■■□□ 2.44
LTBP4Q8N2S1 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC30.29■■■□□ 2.44
LTBP4Q8N2S1 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
LTBP4Q8N2S1 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC30.29■■■□□ 2.44
LTBP4Q8N2S1 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC30.29■■■□□ 2.44
LTBP4Q8N2S1 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC30.29■■■□□ 2.44
LTBP4Q8N2S1 EI24-213ENST00000618552 1747 ntTSL 5 BASIC30.28■■■□□ 2.44
LTBP4Q8N2S1 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
LTBP4Q8N2S1 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
LTBP4Q8N2S1 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC30.28■■■□□ 2.44
LTBP4Q8N2S1 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC30.28■■■□□ 2.44
LTBP4Q8N2S1 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC30.28■■■□□ 2.44
LTBP4Q8N2S1 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC30.28■■■□□ 2.44
LTBP4Q8N2S1 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC30.28■■■□□ 2.44
LTBP4Q8N2S1 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
LTBP4Q8N2S1 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC30.27■■■□□ 2.44
LTBP4Q8N2S1 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC30.27■■■□□ 2.44
LTBP4Q8N2S1 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
LTBP4Q8N2S1 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC30.27■■■□□ 2.44
LTBP4Q8N2S1 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC30.27■■■□□ 2.44
LTBP4Q8N2S1 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC30.27■■■□□ 2.44
LTBP4Q8N2S1 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
LTBP4Q8N2S1 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC30.27■■■□□ 2.44
LTBP4Q8N2S1 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC30.27■■■□□ 2.44
LTBP4Q8N2S1 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
LTBP4Q8N2S1 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC30.26■■■□□ 2.44
LTBP4Q8N2S1 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC30.26■■■□□ 2.44
LTBP4Q8N2S1 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC30.26■■■□□ 2.44
LTBP4Q8N2S1 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC30.26■■■□□ 2.44
LTBP4Q8N2S1 LSM12P1-201ENST00000411836 588 ntBASIC30.25■■■□□ 2.43
LTBP4Q8N2S1 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC30.25■■■□□ 2.43
LTBP4Q8N2S1 AL353708.3-201ENST00000610272 989 ntBASIC30.25■■■□□ 2.43
LTBP4Q8N2S1 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC30.25■■■□□ 2.43
LTBP4Q8N2S1 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC30.25■■■□□ 2.43
LTBP4Q8N2S1 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC30.25■■■□□ 2.43
LTBP4Q8N2S1 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC30.25■■■□□ 2.43
LTBP4Q8N2S1 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC30.25■■■□□ 2.43
LTBP4Q8N2S1 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
LTBP4Q8N2S1 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
LTBP4Q8N2S1 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
LTBP4Q8N2S1 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
LTBP4Q8N2S1 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC30.25■■■□□ 2.43
LTBP4Q8N2S1 ISG20-202ENST00000379224 540 ntTSL 3 BASIC30.25■■■□□ 2.43
LTBP4Q8N2S1 FXN-202ENST00000396364 980 ntTSL 5 BASIC30.25■■■□□ 2.43
LTBP4Q8N2S1 AC092865.7-201ENST00000641832 219 ntBASIC30.25■■■□□ 2.43
LTBP4Q8N2S1 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
LTBP4Q8N2S1 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC30.24■■■□□ 2.43
LTBP4Q8N2S1 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC30.24■■■□□ 2.43
LTBP4Q8N2S1 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC30.24■■■□□ 2.43
LTBP4Q8N2S1 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
LTBP4Q8N2S1 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.43
LTBP4Q8N2S1 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
LTBP4Q8N2S1 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC30.24■■■□□ 2.43
LTBP4Q8N2S1 RMI2-205ENST00000576027 818 ntTSL 2 BASIC30.24■■■□□ 2.43
LTBP4Q8N2S1 KLF2-202ENST00000592003 564 ntTSL 3 BASIC30.24■■■□□ 2.43
LTBP4Q8N2S1 FGF8-207ENST00000618991 856 ntTSL 3 BASIC30.24■■■□□ 2.43
LTBP4Q8N2S1 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
LTBP4Q8N2S1 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC30.23■■■□□ 2.43
LTBP4Q8N2S1 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
LTBP4Q8N2S1 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
LTBP4Q8N2S1 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC30.23■■■□□ 2.43
LTBP4Q8N2S1 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
LTBP4Q8N2S1 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
LTBP4Q8N2S1 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC30.23■■■□□ 2.43
LTBP4Q8N2S1 AC113410.3-201ENST00000623366 203 ntBASIC30.23■■■□□ 2.43
LTBP4Q8N2S1 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC30.23■■■□□ 2.43
LTBP4Q8N2S1 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
LTBP4Q8N2S1 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC30.22■■■□□ 2.43
LTBP4Q8N2S1 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC30.22■■■□□ 2.43
LTBP4Q8N2S1 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC30.22■■■□□ 2.43
LTBP4Q8N2S1 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
LTBP4Q8N2S1 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
LTBP4Q8N2S1 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
LTBP4Q8N2S1 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
LTBP4Q8N2S1 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC30.22■■■□□ 2.43
LTBP4Q8N2S1 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC30.21■■■□□ 2.43
LTBP4Q8N2S1 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
LTBP4Q8N2S1 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC30.21■■■□□ 2.43
LTBP4Q8N2S1 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
LTBP4Q8N2S1 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC30.21■■■□□ 2.43
LTBP4Q8N2S1 SLC29A4P2-201ENST00000504749 1089 ntBASIC30.21■■■□□ 2.43
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms