RNA–Protein interactions for RNA: ENST00000625810.2

ATG4B-226, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4 BASIC

Gene ATG4B, Length 370 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-226ENST00000625810 NISCHQ9Y2I1 1504 aa47.89■■■■■ 5.26
ATG4B-226ENST00000625810 CCDC180Q9P1Z9 1646 aa42.95■■■■■ 4.47
ATG4B-226ENST00000625810 ABCC9O60706 1549 aa42.87■■■■■ 4.45
ATG4B-226ENST00000625810 RB1CC1Q8TDY2 1594 aa40.82■■■■■ 4.13
ATG4B-226ENST00000625810 NACADO15069 1562 aa40.57■■■■■ 4.09
ATG4B-226ENST00000625810 DCAF8L2P0C7V8 631 aa40.29■■■■■ 4.04
ATG4B-226ENST00000625810 DNAJC5BQ9UF47 199 aa40.14■■■■■ 4.02
ATG4B-226ENST00000625810 MYO15BQ96JP2 1530 aa40.06■■■■■ 4
ATG4B-226ENST00000625810 UNC13AQ9UPW8 1703 aa39.91■■■■□ 3.98
ATG4B-226ENST00000625810 PABPN1Q86U42 306 aaKnown RBP eCLIP39.89■■■■□ 3.98
ATG4B-226ENST00000625810 ZCCHC6Q5VYS8 1495 aaKnown RBP39.73■■■■□ 3.95
ATG4B-226ENST00000625810 BICRAQ9NZM4 1560 aa39.67■■■■□ 3.94
ATG4B-226ENST00000625810 DCAF1Q9Y4B6 1507 aa39.58■■■■□ 3.93
ATG4B-226ENST00000625810 SCRIBQ14160 1630 aa39.14■■■■□ 3.86
ATG4B-226ENST00000625810 SHROOM4Q9ULL8 1493 aa39.13■■■■□ 3.85
ATG4B-226ENST00000625810 CC2D2AQ9P2K1 1620 aa38.73■■■■□ 3.79
ATG4B-226ENST00000625810 EIF4G1Q04637 1599 aaKnown RBP38.68■■■■□ 3.78
ATG4B-226ENST00000625810 CECR2Q9BXF3 1484 aa38.6■■■■□ 3.77
ATG4B-226ENST00000625810 NCAPD3P42695 1498 aa37.46■■■■□ 3.59
ATG4B-226ENST00000625810 ATAD2BQ9ULI0 1458 aa37.37■■■■□ 3.57
ATG4B-226ENST00000625810 SMARCA4P51532 1647 aa37.35■■■■□ 3.57
ATG4B-226ENST00000625810 SMARCA2P51531 1590 aa37.25■■■■□ 3.55
ATG4B-226ENST00000625810 HMGXB3Q12766 1538 aa37.2■■■■□ 3.55
ATG4B-226ENST00000625810 BAZ1AQ9NRL2 1556 aaPredicted RBP37.16■■■■□ 3.54
ATG4B-226ENST00000625810 PEG3Q9GZU2 1588 aa37■■■■□ 3.51
ATG4B-226ENST00000625810 BAZ1BQ9UIG0 1483 aaKnown RBP36.99■■■■□ 3.51
ATG4B-226ENST00000625810 ERCC6Q03468 1493 aa36.98■■■■□ 3.51
ATG4B-226ENST00000625810 MROH2BQ7Z745 1585 aa36.91■■■■□ 3.5
ATG4B-226ENST00000625810 CUX2O14529 1486 aa36.91■■■■□ 3.5
ATG4B-226ENST00000625810 NESP48681 1621 aa36.85■■■■□ 3.49
ATG4B-226ENST00000625810 DNAJC5Q9H3Z4 198 aa36.78■■■■□ 3.48
ATG4B-226ENST00000625810 LAMC3Q9Y6N6 1575 aa36.6■■■■□ 3.45
ATG4B-226ENST00000625810 THOC2Q8NI27 1593 aaKnown RBP36.49■■■■□ 3.43
ATG4B-226ENST00000625810 WIZO95785 1651 aa36.46■■■■□ 3.43
ATG4B-226ENST00000625810 KIF21AQ7Z4S6 1674 aa36.38■■■■□ 3.41
ATG4B-226ENST00000625810 PDS5BQ9NTI5 1447 aa36.36■■■■□ 3.41
ATG4B-226ENST00000625810 CADPSQ9ULU8 1353 aa36.31■■■■□ 3.4
ATG4B-226ENST00000625810 RSF1Q96T23 1441 aaPredicted RBP36.17■■■■□ 3.38
ATG4B-226ENST00000625810 MRC2Q9UBG0 1479 aa36.07■■■■□ 3.37
ATG4B-226ENST00000625810 TOP2AP11388 1531 aaKnown RBP36.02■■■■□ 3.36
ATG4B-226ENST00000625810 WDR62O43379 1518 aa36.01■■■■□ 3.36
ATG4B-226ENST00000625810 CEP164Q9UPV0 1460 aa35.94■■■■□ 3.34
ATG4B-226ENST00000625810 CFTRP13569 1480 aa35.93■■■■□ 3.34
ATG4B-226ENST00000625810 FANCD2Q9BXW9 1451 aa35.91■■■■□ 3.34
ATG4B-226ENST00000625810 URB2Q14146 1524 aaKnown RBP35.62■■■■□ 3.29
ATG4B-226ENST00000625810 CCDC88BA6NC98 1476 aa35.6■■■■□ 3.29
ATG4B-226ENST00000625810 PRDM2Q13029 1718 aa35.57■■■■□ 3.28
ATG4B-226ENST00000625810 TOPBP1Q92547 1522 aa35.25■■■■□ 3.23
ATG4B-226ENST00000625810 IFT140Q96RY7 1462 aa35.22■■■■□ 3.23
ATG4B-226ENST00000625810 ZNF608Q9ULD9 1512 aaPredicted RBP35.18■■■■□ 3.22
ATG4B-226ENST00000625810 OSCARQ8IYS5 282 aa35.18■■■■□ 3.22
ATG4B-226ENST00000625810 TRIM41Q8WV44 630 aa35.17■■■■□ 3.22
ATG4B-226ENST00000625810 ABCC8Q09428 1581 aa35.13■■■■□ 3.21
ATG4B-226ENST00000625810 DNMBPQ6XZF7 1577 aa35.13■■■■□ 3.21
ATG4B-226ENST00000625810 EIF4G3O43432 1585 aaKnown RBP35■■■■□ 3.19
ATG4B-226ENST00000625810 TARBP1Q13395 1621 aaKnown RBP34.94■■■■□ 3.18
ATG4B-226ENST00000625810 POLA1P09884 1462 aaPredicted RBP34.9■■■■□ 3.18
ATG4B-226ENST00000625810 AQRO60306 1485 aaKnown RBP eCLIP34.84■■■■□ 3.173e-11■□□□□ 10.6
ATG4B-226ENST00000625810 RIMBP3CA6NJZ7 1639 aa34.78■■■■□ 3.16
ATG4B-226ENST00000625810 RIMBP3BA6NNM3 1639 aa34.78■■■■□ 3.16
ATG4B-226ENST00000625810 RIMBP3Q9UFD9 1639 aa34.78■■■■□ 3.16
ATG4B-226ENST00000625810 RAD54L2Q9Y4B4 1467 aa34.76■■■■□ 3.15
ATG4B-226ENST00000625810 SOGA1O94964 1423 aa34.71■■■■□ 3.15
ATG4B-226ENST00000625810 CHD1O14646 1710 aa34.69■■■■□ 3.14
ATG4B-226ENST00000625810 SUPT5HO00267 1087 aaKnown RBP34.68■■■■□ 3.14
ATG4B-226ENST00000625810 ARHGEF11O15085 1522 aa34.68■■■■□ 3.14
ATG4B-226ENST00000625810 CUX1P39880 1505 aa34.68■■■■□ 3.14
ATG4B-226ENST00000625810 FGD5Q6ZNL6 1462 aa34.68■■■■□ 3.14
ATG4B-226ENST00000625810 TDRD9Q8NDG6 1382 aaKnown RBP34.63■■■■□ 3.13
ATG4B-226ENST00000625810 WDR97A6NE52 1622 aa34.58■■■■□ 3.13
ATG4B-226ENST00000625810 FBLN2P98095 1184 aa34.54■■■■□ 3.12
ATG4B-226ENST00000625810 SNAPC4Q5SXM2 1469 aa34.51■■■■□ 3.11
ATG4B-226ENST00000625810 GRIN2BQ13224 1484 aa34.41■■■■□ 3.1
ATG4B-226ENST00000625810 MAGI1Q96QZ7 1491 aaPredicted RBP34.41■■■■□ 3.1
ATG4B-226ENST00000625810 CYB5RLQ6IPT4 315 aa34.37■■■■□ 3.09
ATG4B-226ENST00000625810 ARAP1Q96P48 1450 aa34.36■■■■□ 3.09
ATG4B-226ENST00000625810 CLASP1Q7Z460 1538 aa34.33■■■■□ 3.09
ATG4B-226ENST00000625810 CHMP7Q8WUX9 453 aaPredicted RBP34.31■■■■□ 3.08
ATG4B-226ENST00000625810 SYNJ2O15056 1496 aa34.3■■■■□ 3.08
ATG4B-226ENST00000625810 ABCA10Q8WWZ4 1543 aa34.3■■■■□ 3.08
ATG4B-226ENST00000625810 PBRM1Q86U86 1689 aa34.29■■■■□ 3.08
ATG4B-226ENST00000625810 GAPVD1Q14C86 1478 aa34.29■■■■□ 3.08
ATG4B-226ENST00000625810 SYNJ1O43426 1573 aa34.28■■■■□ 3.08
ATG4B-226ENST00000625810 ABCA5Q8WWZ7 1642 aa34.26■■■■□ 3.07
ATG4B-226ENST00000625810 WRNQ14191 1432 aaPredicted RBP eCLIP34.14■■■■□ 3.06
ATG4B-226ENST00000625810 BIVM-ERCC5R4GMW8 1640 aa34.14■■■■□ 3.06
ATG4B-226ENST00000625810 TOP2BQ02880 1626 aa34.13■■■■□ 3.05
ATG4B-226ENST00000625810 ADAMTS12P58397 1594 aa33.99■■■■□ 3.03
ATG4B-226ENST00000625810 GRIN2AQ12879 1464 aa33.98■■■■□ 3.03
ATG4B-226ENST00000625810 TRHP20396 242 aaPredicted RBP33.93■■■■□ 3.02
ATG4B-226ENST00000625810 NUP160Q12769 1436 aa33.87■■■■□ 3.01
ATG4B-226ENST00000625810 CEP170Q5SW79 1584 aa33.87■■■■□ 3.01
ATG4B-226ENST00000625810 FHAD1B1AJZ9 1412 aa33.87■■■■□ 3.01
ATG4B-226ENST00000625810 ERICH3Q5RHP9 1530 aa33.86■■■■□ 3.01
ATG4B-226ENST00000625810 ERCC6L2Q5T890 1561 aa33.81■■■■□ 3
ATG4B-226ENST00000625810 SHROOM2Q13796 1616 aa33.72■■■□□ 2.99
ATG4B-226ENST00000625810 RUSC2Q8N2Y8 1516 aa33.52■■■□□ 2.96
ATG4B-226ENST00000625810 PRG4Q92954 1404 aaPredicted RBP33.51■■■□□ 2.95
ATG4B-226ENST00000625810 JPH4Q96JJ6 628 aa33.47■■■□□ 2.95
ATG4B-226ENST00000625810 KIF27Q86VH2 1401 aa33.45■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms