RNA–Protein interactions for RNA: ENST00000486728.5

TNFRSF18-204, Transcript of TNF receptor superfamily member 18, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF18, Length 727 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF18-204ENST00000486728 NISCHQ9Y2I1 1504 aa48.47■■■■■ 5.35
TNFRSF18-204ENST00000486728 CCDC180Q9P1Z9 1646 aa43.36■■■■■ 4.53
TNFRSF18-204ENST00000486728 ABCC9O60706 1549 aa42.83■■■■■ 4.45
TNFRSF18-204ENST00000486728 RB1CC1Q8TDY2 1594 aa41.08■■■■■ 4.17
TNFRSF18-204ENST00000486728 NACADO15069 1562 aa40.91■■■■■ 4.14
TNFRSF18-204ENST00000486728 DCAF8L2P0C7V8 631 aa40.68■■■■■ 4.1
TNFRSF18-204ENST00000486728 MYO15BQ96JP2 1530 aa40.52■■■■■ 4.08
TNFRSF18-204ENST00000486728 ZCCHC6Q5VYS8 1495 aaKnown RBP40.27■■■■■ 4.04
TNFRSF18-204ENST00000486728 DCAF1Q9Y4B6 1507 aa40.14■■■■■ 4.02
TNFRSF18-204ENST00000486728 UNC13AQ9UPW8 1703 aa40.07■■■■■ 4
TNFRSF18-204ENST00000486728 PABPN1Q86U42 306 aaKnown RBP eCLIP39.91■■■■□ 3.98
TNFRSF18-204ENST00000486728 BICRAQ9NZM4 1560 aa39.73■■■■□ 3.95
TNFRSF18-204ENST00000486728 DNAJC5BQ9UF47 199 aa39.67■■■■□ 3.94
TNFRSF18-204ENST00000486728 SHROOM4Q9ULL8 1493 aa39.47■■■■□ 3.91
TNFRSF18-204ENST00000486728 SCRIBQ14160 1630 aa39.44■■■■□ 3.9
TNFRSF18-204ENST00000486728 EIF4G1Q04637 1599 aaKnown RBP38.78■■■■□ 3.8
TNFRSF18-204ENST00000486728 CC2D2AQ9P2K1 1620 aa38.74■■■■□ 3.79
TNFRSF18-204ENST00000486728 CECR2Q9BXF3 1484 aa38.6■■■■□ 3.77
TNFRSF18-204ENST00000486728 NCAPD3P42695 1498 aa37.72■■■■□ 3.63
TNFRSF18-204ENST00000486728 SMARCA4P51532 1647 aa37.71■■■■□ 3.63
TNFRSF18-204ENST00000486728 BAZ1AQ9NRL2 1556 aaPredicted RBP37.65■■■■□ 3.62
TNFRSF18-204ENST00000486728 ATAD2BQ9ULI0 1458 aa37.64■■■■□ 3.62
TNFRSF18-204ENST00000486728 SMARCA2P51531 1590 aa37.63■■■■□ 3.62
TNFRSF18-204ENST00000486728 HMGXB3Q12766 1538 aa37.51■■■■□ 3.6
TNFRSF18-204ENST00000486728 PEG3Q9GZU2 1588 aa37.38■■■■□ 3.57
TNFRSF18-204ENST00000486728 BAZ1BQ9UIG0 1483 aaKnown RBP37.34■■■■□ 3.57
TNFRSF18-204ENST00000486728 MROH2BQ7Z745 1585 aa37.33■■■■□ 3.57
TNFRSF18-204ENST00000486728 ERCC6Q03468 1493 aa37.06■■■■□ 3.52
TNFRSF18-204ENST00000486728 WIZO95785 1651 aa36.96■■■■□ 3.51
TNFRSF18-204ENST00000486728 NESP48681 1621 aa36.88■■■■□ 3.49
TNFRSF18-204ENST00000486728 CUX2O14529 1486 aa36.87■■■■□ 3.49
TNFRSF18-204ENST00000486728 LAMC3Q9Y6N6 1575 aa36.83■■■■□ 3.49
TNFRSF18-204ENST00000486728 RSF1Q96T23 1441 aaPredicted RBP36.72■■■■□ 3.47
TNFRSF18-204ENST00000486728 PDS5BQ9NTI5 1447 aa36.63■■■■□ 3.45
TNFRSF18-204ENST00000486728 CADPSQ9ULU8 1353 aa36.6■■■■□ 3.45
TNFRSF18-204ENST00000486728 TOP2AP11388 1531 aaKnown RBP36.51■■■■□ 3.44
TNFRSF18-204ENST00000486728 THOC2Q8NI27 1593 aaKnown RBP36.49■■■■□ 3.43
TNFRSF18-204ENST00000486728 KIF21AQ7Z4S6 1674 aa36.45■■■■□ 3.42
TNFRSF18-204ENST00000486728 CFTRP13569 1480 aa36.27■■■■□ 3.4
TNFRSF18-204ENST00000486728 DNAJC5Q9H3Z4 198 aa36.25■■■■□ 3.39
TNFRSF18-204ENST00000486728 MRC2Q9UBG0 1479 aa36.24■■■■□ 3.39
TNFRSF18-204ENST00000486728 CEP164Q9UPV0 1460 aa36.2■■■■□ 3.39
TNFRSF18-204ENST00000486728 FANCD2Q9BXW9 1451 aa36.18■■■■□ 3.38
TNFRSF18-204ENST00000486728 WDR62O43379 1518 aa36.13■■■■□ 3.38
TNFRSF18-204ENST00000486728 CCDC88BA6NC98 1476 aa36.05■■■■□ 3.36
TNFRSF18-204ENST00000486728 PRDM2Q13029 1718 aa35.94■■■■□ 3.34
TNFRSF18-204ENST00000486728 URB2Q14146 1524 aaKnown RBP35.79■■■■□ 3.32
TNFRSF18-204ENST00000486728 ABCC8Q09428 1581 aa35.59■■■■□ 3.29
TNFRSF18-204ENST00000486728 SUPT5HO00267 1087 aaKnown RBP35.56■■■■□ 3.28
TNFRSF18-204ENST00000486728 TOPBP1Q92547 1522 aa35.52■■■■□ 3.28
TNFRSF18-204ENST00000486728 IFT140Q96RY7 1462 aa35.48■■■■□ 3.27
TNFRSF18-204ENST00000486728 DNMBPQ6XZF7 1577 aa35.46■■■■□ 3.27
TNFRSF18-204ENST00000486728 ZNF608Q9ULD9 1512 aaPredicted RBP35.25■■■■□ 3.23
TNFRSF18-204ENST00000486728 OSCARQ8IYS5 282 aa35.22■■■■□ 3.23
TNFRSF18-204ENST00000486728 POLA1P09884 1462 aaPredicted RBP35.18■■■■□ 3.22
TNFRSF18-204ENST00000486728 TARBP1Q13395 1621 aaKnown RBP35.14■■■■□ 3.22
TNFRSF18-204ENST00000486728 EIF4G3O43432 1585 aaKnown RBP35.14■■■■□ 3.22
TNFRSF18-204ENST00000486728 SOGA1O94964 1423 aa35.05■■■■□ 3.2
TNFRSF18-204ENST00000486728 CUX1P39880 1505 aa35.03■■■■□ 3.2
TNFRSF18-204ENST00000486728 FGD5Q6ZNL6 1462 aa35.02■■■■□ 3.2
TNFRSF18-204ENST00000486728 AQRO60306 1485 aaKnown RBP eCLIP35.01■■■■□ 3.19
TNFRSF18-204ENST00000486728 RAD54L2Q9Y4B4 1467 aa34.99■■■■□ 3.19
TNFRSF18-204ENST00000486728 WDR97A6NE52 1622 aa34.97■■■■□ 3.19
TNFRSF18-204ENST00000486728 TDRD9Q8NDG6 1382 aaKnown RBP34.87■■■■□ 3.17
TNFRSF18-204ENST00000486728 TRIM41Q8WV44 630 aa34.82■■■■□ 3.16
TNFRSF18-204ENST00000486728 CHD1O14646 1710 aa34.75■■■■□ 3.15
TNFRSF18-204ENST00000486728 FBLN2P98095 1184 aa34.74■■■■□ 3.15
TNFRSF18-204ENST00000486728 GRIN2BQ13224 1484 aa34.73■■■■□ 3.15
TNFRSF18-204ENST00000486728 SNAPC4Q5SXM2 1469 aa34.71■■■■□ 3.15
TNFRSF18-204ENST00000486728 MAGI1Q96QZ7 1491 aaPredicted RBP34.71■■■■□ 3.15
TNFRSF18-204ENST00000486728 ABCA10Q8WWZ4 1543 aa34.69■■■■□ 3.14
TNFRSF18-204ENST00000486728 WRNQ14191 1432 aaPredicted RBP eCLIP34.68■■■■□ 3.14
TNFRSF18-204ENST00000486728 RIMBP3CA6NJZ7 1639 aa34.64■■■■□ 3.14
TNFRSF18-204ENST00000486728 RIMBP3BA6NNM3 1639 aa34.64■■■■□ 3.14
TNFRSF18-204ENST00000486728 TOP2BQ02880 1626 aa34.64■■■■□ 3.14
TNFRSF18-204ENST00000486728 RIMBP3Q9UFD9 1639 aa34.64■■■■□ 3.14
TNFRSF18-204ENST00000486728 GAPVD1Q14C86 1478 aa34.64■■■■□ 3.14
TNFRSF18-204ENST00000486728 BIVM-ERCC5R4GMW8 1640 aa34.63■■■■□ 3.13
TNFRSF18-204ENST00000486728 SYNJ1O43426 1573 aa34.63■■■■□ 3.13
TNFRSF18-204ENST00000486728 ARHGEF11O15085 1522 aa34.61■■■■□ 3.13
TNFRSF18-204ENST00000486728 CHMP7Q8WUX9 453 aaPredicted RBP34.6■■■■□ 3.13
TNFRSF18-204ENST00000486728 PBRM1Q86U86 1689 aa34.57■■■■□ 3.12
TNFRSF18-204ENST00000486728 ABCA5Q8WWZ7 1642 aa34.56■■■■□ 3.12
TNFRSF18-204ENST00000486728 SYNJ2O15056 1496 aa34.56■■■■□ 3.12
TNFRSF18-204ENST00000486728 CLASP1Q7Z460 1538 aa34.41■■■■□ 3.1
TNFRSF18-204ENST00000486728 CYB5RLQ6IPT4 315 aa34.31■■■■□ 3.08
TNFRSF18-204ENST00000486728 ERICH3Q5RHP9 1530 aa34.29■■■■□ 3.08
TNFRSF18-204ENST00000486728 ADAMTS12P58397 1594 aa34.28■■■■□ 3.08
TNFRSF18-204ENST00000486728 ARAP1Q96P48 1450 aa34.27■■■■□ 3.08
TNFRSF18-204ENST00000486728 GRIN2AQ12879 1464 aa34.26■■■■□ 3.07
TNFRSF18-204ENST00000486728 FHAD1B1AJZ9 1412 aa34.24■■■■□ 3.07
TNFRSF18-204ENST00000486728 NUP160Q12769 1436 aa34.13■■■■□ 3.05
TNFRSF18-204ENST00000486728 CEP170Q5SW79 1584 aa34.06■■■■□ 3.04
TNFRSF18-204ENST00000486728 KIF27Q86VH2 1401 aa34.03■■■■□ 3.04
TNFRSF18-204ENST00000486728 SHROOM2Q13796 1616 aa33.9■■■■□ 3.02
TNFRSF18-204ENST00000486728 CUL7Q14999 1698 aa33.88■■■■□ 3.01
TNFRSF18-204ENST00000486728 IGF1RP08069 1367 aa33.87■■■■□ 3.01
TNFRSF18-204ENST00000486728 ERCC6L2Q5T890 1561 aa33.82■■■■□ 3
TNFRSF18-204ENST00000486728 TRHP20396 242 aaPredicted RBP33.82■■■■□ 3
TNFRSF18-204ENST00000486728 RUSC2Q8N2Y8 1516 aa33.79■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms