Protein–RNA interactions for Protein: P34228

SEF1, Putative transcription factor SEF1, yeastyeast

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SEF1P34228 PBP2YBR233W 1242 nt3.62□□□□□ -1.83
SEF1P34228 RIB5YBR256C 717 nt3.62□□□□□ -1.83
SEF1P34228 ATP16YDL004W 483 nt3.61□□□□□ -1.83
SEF1P34228 YDL158CYDL158C 309 nt3.61□□□□□ -1.83
SEF1P34228 PHM6YDR281C 315 nt3.61□□□□□ -1.83
SEF1P34228 RPC25YKL144C 639 nt3.61□□□□□ -1.83
SEF1P34228 YBL068W-AYBL068W-A 237 nt3.61□□□□□ -1.83
SEF1P34228 MER1YNL210W 813 nt3.61□□□□□ -1.83
SEF1P34228 GRX7YBR014C 612 nt3.61□□□□□ -1.83
SEF1P34228 DIM1YPL266W 957 nt3.61□□□□□ -1.83
SEF1P34228 BIK1YCL029C 1323 nt3.61□□□□□ -1.83
SEF1P34228 CAF130YGR134W 3369 nt3.61□□□□□ -1.83
SEF1P34228 BUD27YFL023W 2391 nt3.61□□□□□ -1.83
SEF1P34228 PTA1YAL043C 2358 nt3.61□□□□□ -1.83
SEF1P34228 ARO80YDR421W 2853 nt3.61□□□□□ -1.83
SEF1P34228 SPT16YGL207W 3108 nt3.6□□□□□ -1.83
SEF1P34228 YDL199CYDL199C 2064 nt3.6□□□□□ -1.83
SEF1P34228 QRI7YDL104C 1224 nt3.6□□□□□ -1.83
SEF1P34228 YDL162CYDL162C 357 nt3.6□□□□□ -1.83
SEF1P34228 YGL242CYGL242C 546 nt3.6□□□□□ -1.83
SEF1P34228 CCE1YKL011C 1062 nt3.6□□□□□ -1.83
SEF1P34228 HMX1YLR205C 954 nt3.6□□□□□ -1.83
SEF1P34228 SMD2YLR275W 333 nt3.6□□□□□ -1.83
SEF1P34228 TEM1YML064C 738 nt3.6□□□□□ -1.83
SEF1P34228 YOR366WYOR366W 354 nt3.6□□□□□ -1.83
SEF1P34228 MRPS9YBR146W 837 nt3.6□□□□□ -1.83
SEF1P34228 MSM1YGR171C 1728 nt3.6□□□□□ -1.83
SEF1P34228 KIN3YAR018C 1308 nt3.6□□□□□ -1.83
SEF1P34228 HUL5YGL141W 2733 nt3.59□□□□□ -1.83
SEF1P34228 YNR065CYNR065C 3351 nt3.59□□□□□ -1.83
SEF1P34228 YGR114CYGR114C 390 nt3.59□□□□□ -1.83
SEF1P34228 PTI1YGR156W 1278 nt3.59□□□□□ -1.83
SEF1P34228 DOG1YHR044C 741 nt3.59□□□□□ -1.83
SEF1P34228 SVP26YHR181W 687 nt3.59□□□□□ -1.83
SEF1P34228 SNX4YJL036W 1272 nt3.59□□□□□ -1.83
SEF1P34228 SWD2YKL018W 990 nt3.59□□□□□ -1.83
SEF1P34228 YKL162C-AYKL162C-A 153 nt3.59□□□□□ -1.83
SEF1P34228 IDP2YLR174W 1239 nt3.59□□□□□ -1.83
SEF1P34228 PEX15YOL044W 1152 nt3.59□□□□□ -1.83
SEF1P34228 HUA2YOR284W 732 nt3.59□□□□□ -1.83
SEF1P34228 PPT2YPL148C 522 nt3.59□□□□□ -1.83
SEF1P34228 GCD2YGR083C 1956 nt3.59□□□□□ -1.83
SEF1P34228 SSH1YBR283C 1473 nt3.59□□□□□ -1.84
SEF1P34228 FAR8YMR029C 1572 nt3.59□□□□□ -1.84
SEF1P34228 SAG1YJR004C 1953 nt3.58□□□□□ -1.84
SEF1P34228 HTB1YDR224C 396 nt3.58□□□□□ -1.84
SEF1P34228 DPP1YDR284C 870 nt3.58□□□□□ -1.84
SEF1P34228 CWC23YGL128C 852 nt3.58□□□□□ -1.84
SEF1P34228 EMC2YJR088C 879 nt3.58□□□□□ -1.84
SEF1P34228 REH1YLR387C 1299 nt3.58□□□□□ -1.84
SEF1P34228 ASI2YNL159C 870 nt3.58□□□□□ -1.84
SEF1P34228 GRX5YPL059W 453 nt3.58□□□□□ -1.84
SEF1P34228 AEP2YMR282C 1743 nt3.58□□□□□ -1.84
SEF1P34228 BSC1YDL037C 987 nt3.57□□□□□ -1.84
SEF1P34228 PET100YDR079W 336 nt3.57□□□□□ -1.84
SEF1P34228 AI4Q0065 1671 nt3.57□□□□□ -1.84
SEF1P34228 GUK1YDR454C 564 nt3.57□□□□□ -1.84
SEF1P34228 FOL2YGR267C 732 nt3.57□□□□□ -1.84
SEF1P34228 YJR111CYJR111C 852 nt3.57□□□□□ -1.84
SEF1P34228 LCB5YLR260W 2064 nt3.57□□□□□ -1.84
SEF1P34228 snR11snR11 258 nt3.57□□□□□ -1.84
SEF1P34228 CUP9YPL177C 921 nt3.57□□□□□ -1.84
SEF1P34228 PWR1PWR1 941 nt3.57□□□□□ -1.84
SEF1P34228 MCM7YBR202W 2538 nt3.57□□□□□ -1.84
SEF1P34228 UTP5YDR398W 1932 nt3.56□□□□□ -1.84
SEF1P34228 PKP2YGL059W 1476 nt3.56□□□□□ -1.84
SEF1P34228 YGR027W-BYGR027W-B 5268 nt3.56□□□□□ -1.84
SEF1P34228 YLR227W-BYLR227W-B 5268 nt3.56□□□□□ -1.84
SEF1P34228 YPR158C-DYPR158C-D 5268 nt3.56□□□□□ -1.84
SEF1P34228 XRS2YDR369C 2565 nt3.56□□□□□ -1.84
SEF1P34228 LRS4YDR439W 1044 nt3.56□□□□□ -1.84
SEF1P34228 TAM41YGR046W 1158 nt3.56□□□□□ -1.84
SEF1P34228 ERP1YAR002C-A 660 nt3.56□□□□□ -1.84
SEF1P34228 MIC27YNL100W 705 nt3.56□□□□□ -1.84
SEF1P34228 snR17asnR17a 333 nt3.56□□□□□ -1.84
SEF1P34228 FDH2YPL275W 711 nt3.56□□□□□ -1.84
SEF1P34228 FYV5YCL058C 459 nt3.56□□□□□ -1.84
SEF1P34228 WHI3YNL197C 1986 nt3.56□□□□□ -1.84
SEF1P34228 ARO1YDR127W 4767 nt3.56□□□□□ -1.84
SEF1P34228 YGL176CYGL176C 1665 nt3.55□□□□□ -1.84
SEF1P34228 YML096WYML096W 1578 nt3.55□□□□□ -1.84
SEF1P34228 SLY41YOR307C 1362 nt3.55□□□□□ -1.84
SEF1P34228 CHL1YPL008W 2586 nt3.55□□□□□ -1.84
SEF1P34228 YDR491CYDR491C 492 nt3.55□□□□□ -1.84
SEF1P34228 BUR2YLR226W 1188 nt3.55□□□□□ -1.84
SEF1P34228 IMP1YMR150C 573 nt3.55□□□□□ -1.84
SEF1P34228 LDS2YOL047C 1071 nt3.55□□□□□ -1.84
SEF1P34228 ACE2YLR131C 2313 nt3.55□□□□□ -1.84
SEF1P34228 ALG8YOR067C 1734 nt3.55□□□□□ -1.84
SEF1P34228 SYT1YPR095C 3681 nt3.54□□□□□ -1.84
SEF1P34228 RRP42YDL111C 798 nt3.54□□□□□ -1.84
SEF1P34228 tC(GCA)BtC(GCA)B 72 nt3.54□□□□□ -1.84
SEF1P34228 tC(GCA)GtC(GCA)G 72 nt3.54□□□□□ -1.84
SEF1P34228 tC(GCA)P1tC(GCA)P1 72 nt3.54□□□□□ -1.84
SEF1P34228 tC(GCA)P2tC(GCA)P2 72 nt3.54□□□□□ -1.84
SEF1P34228 ECM11YDR446W 909 nt3.54□□□□□ -1.84
SEF1P34228 SPO11YHL022C 1197 nt3.54□□□□□ -1.84
SEF1P34228 ASC1YMR116C 960 nt3.54□□□□□ -1.84
SEF1P34228 SIW14YNL032W 846 nt3.54□□□□□ -1.84
SEF1P34228 YOR238WYOR238W 912 nt3.54□□□□□ -1.84
Retrieved 100 of 7,029 protein–RNA pairs in 22.5 ms