RNA–Protein interactions for RNA: YHL022C

SPO11, Transcript of Meiosis-specific protein that initiates meiotic recombination, yeastyeast

Gene SPO11, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPO11YHL022C MTC1P47018 478 aaKnown RBP15.79■□□□□ 0.12
SPO11YHL022C DRS1P32892 752 aaKnown RBP15.25■□□□□ 0.03
SPO11YHL022C FAP1P53971 965 aa14.82□□□□□ -0.04
SPO11YHL022C PRY3P47033 881 aa14□□□□□ -0.17
SPO11YHL022C PRI1P10363 409 aa13.47□□□□□ -0.25
SPO11YHL022C AAD16Q02895 342 aa13.47□□□□□ -0.25
SPO11YHL022C YCK3P39962 524 aa13.3□□□□□ -0.28
SPO11YHL022C DIP2Q12220 943 aaPredicted RBP13.19□□□□□ -0.3
SPO11YHL022C HAA1Q12753 694 aaKnown RBP13.02□□□□□ -0.33
SPO11YHL022C ISW2Q08773 1120 aa12.96□□□□□ -0.33
SPO11YHL022C BFR2Q06631 534 aaKnown RBP12.91□□□□□ -0.34
SPO11YHL022C AVT3P36062 692 aa12.86□□□□□ -0.35
SPO11YHL022C RPG1P38249 964 aaKnown RBP12.86□□□□□ -0.35
SPO11YHL022C TSR3Q12094 313 aaKnown RBP12.71□□□□□ -0.37
SPO11YHL022C RSE1Q04693 1361 aaKnown RBP12.6□□□□□ -0.39
SPO11YHL022C RPL17AP05740 184 aaKnown RBP12.2□□□□□ -0.46
SPO11YHL022C RPL17BP46990 184 aaKnown RBP12.2□□□□□ -0.46
SPO11YHL022C MRPL32P25348 183 aa12.14□□□□□ -0.47
SPO11YHL022C REB1P21538 810 aa12.08□□□□□ -0.48
SPO11YHL022C YGL015CP33199 130 aa11.87□□□□□ -0.51
SPO11YHL022C SPT21P35209 758 aa11.7□□□□□ -0.54
SPO11YHL022C TFA1P36100 482 aa11.7□□□□□ -0.54
SPO11YHL022C YKR023WP36119 530 aaKnown RBP11.48□□□□□ -0.57
SPO11YHL022C CDC27P38042 758 aa11.48□□□□□ -0.57
SPO11YHL022C RIM101P33400 625 aa11.4□□□□□ -0.58
SPO11YHL022C BUD31P25337 157 aaPredicted RBP11.31□□□□□ -0.6
SPO11YHL022C HOP09932 586 aa11.26□□□□□ -0.61
SPO11YHL022C DCD1P06773 312 aa11.22□□□□□ -0.61
SPO11YHL022C TFC8Q12308 588 aa11.22□□□□□ -0.61
SPO11YHL022C MAP2P38174 421 aaKnown RBP11.2□□□□□ -0.62
SPO11YHL022C UBP10P53874 792 aaPredicted RBP11.18□□□□□ -0.62
SPO11YHL022C OXP1P28273 1286 aa11.06□□□□□ -0.64
SPO11YHL022C BCH2P36122 765 aa10.89□□□□□ -0.67
SPO11YHL022C YIL055CP40523 627 aaKnown RBP10.86□□□□□ -0.67
SPO11YHL022C PTP3P40048 928 aa10.84□□□□□ -0.67
SPO11YHL022C SCY1P53009 804 aa10.84□□□□□ -0.67
SPO11YHL022C YAH1Q12184 172 aaKnown RBP10.82□□□□□ -0.68
SPO11YHL022C RSM7P47150 247 aa10.7□□□□□ -0.7
SPO11YHL022C TIF4632P39936 914 aaKnown RBP10.69□□□□□ -0.7
SPO11YHL022C SLX5P32828 619 aaKnown RBP10.68□□□□□ -0.7
SPO11YHL022C TGL3P40308 642 aa10.68□□□□□ -0.7
SPO11YHL022C SIS1P25294 352 aaKnown RBP10.66□□□□□ -0.7
SPO11YHL022C EPS1P40557 701 aa10.65□□□□□ -0.7
SPO11YHL022C YLR271WQ06152 274 aa10.63□□□□□ -0.71
SPO11YHL022C SSP1P38871 571 aa10.6□□□□□ -0.71
SPO11YHL022C BDF1P35817 686 aa10.59□□□□□ -0.71
SPO11YHL022C AI2P03876 854 aa10.58□□□□□ -0.72
SPO11YHL022C UBP9P39967 754 aa10.57□□□□□ -0.72
SPO11YHL022C BBC1P47068 1157 aa10.51□□□□□ -0.73
SPO11YHL022C ARP8Q12386 881 aaKnown RBP RIP-Chip data10.46□□□□□ -0.73not detected
SPO11YHL022C PSD2P53037 1138 aaKnown RBP10.4□□□□□ -0.74
SPO11YHL022C CST9Q06032 482 aa10.3□□□□□ -0.76
SPO11YHL022C MGA2P40578 1113 aa10.28□□□□□ -0.76
SPO11YHL022C MRM1P25270 412 aa10.23□□□□□ -0.77
SPO11YHL022C YBL029C-AQ3E756 94 aa10.17□□□□□ -0.78
SPO11YHL022C MST1P07236 462 aa10.16□□□□□ -0.78
SPO11YHL022C NSR1P27476 414 aaKnown RBP RIP-Chip data10.09□□□□□ -0.79not detected
SPO11YHL022C YAP5P40574 245 aa10.06□□□□□ -0.8
SPO11YHL022C YOR238WQ08634 303 aa10.06□□□□□ -0.8
SPO11YHL022C RTG3P38165 486 aa10.02□□□□□ -0.81
SPO11YHL022C RCR1P38212 213 aa10.01□□□□□ -0.81
SPO11YHL022C VPS29P38759 282 aa9.99□□□□□ -0.81
SPO11YHL022C VNX1P42839 908 aa9.99□□□□□ -0.81
SPO11YHL022C PIB1Q06651 286 aa9.97□□□□□ -0.81
SPO11YHL022C YMR1P47147 688 aaKnown RBP RIP-Chip data9.91□□□□□ -0.82not detected
SPO11YHL022C YFR006WP43590 535 aa9.89□□□□□ -0.83
SPO11YHL022C DBP1P24784 617 aaKnown RBP9.88□□□□□ -0.83
SPO11YHL022C STS1P38637 319 aa9.87□□□□□ -0.83
SPO11YHL022C SPP1Q03012 353 aa9.87□□□□□ -0.83
SPO11YHL022C WSC3Q12215 556 aa9.87□□□□□ -0.83
SPO11YHL022C GTT3P39996 337 aa9.83□□□□□ -0.84
SPO11YHL022C RAM2P29703 316 aa9.82□□□□□ -0.84
SPO11YHL022C AIR2Q12476 344 aaKnown RBP9.79□□□□□ -0.84
SPO11YHL022C FKH1P40466 484 aa9.76□□□□□ -0.85
SPO11YHL022C VMA1P17255 1071 aaKnown RBP9.73□□□□□ -0.85
SPO11YHL022C TIF11P38912 153 aaKnown RBP9.73□□□□□ -0.85
SPO11YHL022C MAK11P20484 414 aaKnown RBP9.69□□□□□ -0.86
SPO11YHL022C YJL171CP46992 396 aa9.66□□□□□ -0.86
SPO11YHL022C YOL036WQ08206 761 aa9.64□□□□□ -0.87
SPO11YHL022C SET4P42948 560 aa9.63□□□□□ -0.87
SPO11YHL022C SAM3Q08986 587 aa9.62□□□□□ -0.87
SPO11YHL022C MIF2P35201 549 aa9.61□□□□□ -0.87
SPO11YHL022C LDB19Q12502 818 aa9.61□□□□□ -0.87
SPO11YHL022C EDS1P38073 919 aa9.59□□□□□ -0.87
SPO11YHL022C COQ8P27697 501 aa9.58□□□□□ -0.88
SPO11YHL022C MSB4Q12317 492 aa9.58□□□□□ -0.88
SPO11YHL022C IOC2Q12072 812 aa9.57□□□□□ -0.88
SPO11YHL022C ULI1P43604 169 aa9.56□□□□□ -0.88
SPO11YHL022C GYP5Q12344 894 aa9.54□□□□□ -0.88
SPO11YHL022C PTC3P34221 468 aaKnown RBP9.51□□□□□ -0.89
SPO11YHL022C TRP5P00931 707 aaKnown RBP9.5□□□□□ -0.89
SPO11YHL022C EAP1P36041 632 aaKnown RBP9.5□□□□□ -0.89
SPO11YHL022C BMT6Q12291 365 aa9.49□□□□□ -0.89
SPO11YHL022C DCW1P36091 449 aa9.47□□□□□ -0.89
SPO11YHL022C GRE2Q12068 342 aaKnown RBP9.46□□□□□ -0.9
SPO11YHL022C SET1P38827 1080 aaKnown RBP9.45□□□□□ -0.9
SPO11YHL022C DMA1P38823 416 aa9.43□□□□□ -0.9
SPO11YHL022C ABP1P15891 592 aaKnown RBP9.42□□□□□ -0.9
SPO11YHL022C ATH1P48016 1211 aa9.42□□□□□ -0.9
SPO11YHL022C HTA1P04911 132 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms