RNA–Protein interactions for RNA: YKL011C

CCE1, Transcript of Mitochondrial cruciform cutting endonuclease, yeastyeast

Gene CCE1, Length 1,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCE1YKL011C MTC1P47018 478 aaKnown RBP18.45■□□□□ 0.54
CCE1YKL011C FAP1P53971 965 aa17.85■□□□□ 0.45
CCE1YKL011C PRY3P47033 881 aa16.84■□□□□ 0.29
CCE1YKL011C AAD16Q02895 342 aa16.23■□□□□ 0.19
CCE1YKL011C PRI1P10363 409 aa16.2■□□□□ 0.18
CCE1YKL011C DRS1P32892 752 aaKnown RBP16.06■□□□□ 0.16
CCE1YKL011C YCK3P39962 524 aa15.95■□□□□ 0.14
CCE1YKL011C HAA1Q12753 694 aaKnown RBP15.74■□□□□ 0.11
CCE1YKL011C ISW2Q08773 1120 aa15.51■□□□□ 0.07
CCE1YKL011C RPG1P38249 964 aaKnown RBP15.4■□□□□ 0.06
CCE1YKL011C TSR3Q12094 313 aaKnown RBP15.24■□□□□ 0.03
CCE1YKL011C MRPL32P25348 183 aa14.62□□□□□ -0.07
CCE1YKL011C DIP2Q12220 943 aaPredicted RBP14.49□□□□□ -0.09
CCE1YKL011C YGL015CP33199 130 aa14.35□□□□□ -0.11
CCE1YKL011C RSE1Q04693 1361 aaKnown RBP14.33□□□□□ -0.12
CCE1YKL011C REB1P21538 810 aa13.98□□□□□ -0.17
CCE1YKL011C RPL17AP05740 184 aaKnown RBP13.96□□□□□ -0.17
CCE1YKL011C RPL17BP46990 184 aaKnown RBP13.96□□□□□ -0.17
CCE1YKL011C CDC27P38042 758 aa13.74□□□□□ -0.21
CCE1YKL011C BUD31P25337 157 aaPredicted RBP13.69□□□□□ -0.22
CCE1YKL011C AVT3P36062 692 aa13.68□□□□□ -0.22
CCE1YKL011C UBP10P53874 792 aaPredicted RBP13.49□□□□□ -0.25
CCE1YKL011C MAP2P38174 421 aaKnown RBP13.43□□□□□ -0.26
CCE1YKL011C YKR023WP36119 530 aaKnown RBP13.42□□□□□ -0.26
CCE1YKL011C SPT21P35209 758 aa13.32□□□□□ -0.28
CCE1YKL011C TFC8Q12308 588 aa13.14□□□□□ -0.31
CCE1YKL011C HOP09932 586 aa13.13□□□□□ -0.31
CCE1YKL011C DCD1P06773 312 aa13.11□□□□□ -0.31
CCE1YKL011C SCY1P53009 804 aa12.95□□□□□ -0.34
CCE1YKL011C TIF4632P39936 914 aaKnown RBP12.9□□□□□ -0.34
CCE1YKL011C TGL3P40308 642 aa12.89□□□□□ -0.35
CCE1YKL011C SIS1P25294 352 aaKnown RBP12.88□□□□□ -0.35
CCE1YKL011C SLX5P32828 619 aaKnown RBP12.84□□□□□ -0.35
CCE1YKL011C UBP9P39967 754 aa12.81□□□□□ -0.36
CCE1YKL011C BFR2Q06631 534 aaKnown RBP12.79□□□□□ -0.36
CCE1YKL011C BCH2P36122 765 aa12.66□□□□□ -0.38
CCE1YKL011C RIM101P33400 625 aa12.59□□□□□ -0.39
CCE1YKL011C EPS1P40557 701 aa12.26□□□□□ -0.45
CCE1YKL011C MST1P07236 462 aa12.24□□□□□ -0.45
CCE1YKL011C BDF1P35817 686 aa12.24□□□□□ -0.45
CCE1YKL011C YBL029C-AQ3E756 94 aa12.21□□□□□ -0.45
CCE1YKL011C OXP1P28273 1286 aa12.13□□□□□ -0.47
CCE1YKL011C YOR238WQ08634 303 aa12.1□□□□□ -0.47
CCE1YKL011C VNX1P42839 908 aa12.03□□□□□ -0.48
CCE1YKL011C NSR1P27476 414 aaKnown RBP RIP-Chip data12.01□□□□□ -0.49not detected
CCE1YKL011C PTP3P40048 928 aa11.94□□□□□ -0.5
CCE1YKL011C SPP1Q03012 353 aa11.9□□□□□ -0.5
CCE1YKL011C YIL055CP40523 627 aaKnown RBP11.89□□□□□ -0.51
CCE1YKL011C YAP5P40574 245 aa11.87□□□□□ -0.51
CCE1YKL011C WSC3Q12215 556 aa11.83□□□□□ -0.52
CCE1YKL011C BBC1P47068 1157 aa11.8□□□□□ -0.52
CCE1YKL011C AIR2Q12476 344 aaKnown RBP11.8□□□□□ -0.52
CCE1YKL011C FKH1P40466 484 aa11.75□□□□□ -0.53
CCE1YKL011C RSM7P47150 247 aa11.75□□□□□ -0.53
CCE1YKL011C AI2P03876 854 aa11.74□□□□□ -0.53
CCE1YKL011C TIF11P38912 153 aaKnown RBP11.72□□□□□ -0.53
CCE1YKL011C YJL171CP46992 396 aa11.68□□□□□ -0.54
CCE1YKL011C GTT3P39996 337 aa11.62□□□□□ -0.55
CCE1YKL011C YAH1Q12184 172 aaKnown RBP11.57□□□□□ -0.56
CCE1YKL011C LDB19Q12502 818 aa11.56□□□□□ -0.56
CCE1YKL011C IOC2Q12072 812 aa11.51□□□□□ -0.57
CCE1YKL011C ULI1P43604 169 aa11.5□□□□□ -0.57
CCE1YKL011C BMT6Q12291 365 aa11.47□□□□□ -0.57
CCE1YKL011C PIB1Q06651 286 aa11.44□□□□□ -0.58
CCE1YKL011C YLR271WQ06152 274 aa11.37□□□□□ -0.59
CCE1YKL011C PSD2P53037 1138 aaKnown RBP11.34□□□□□ -0.59
CCE1YKL011C MSB4Q12317 492 aa11.33□□□□□ -0.6
CCE1YKL011C EAP1P36041 632 aaKnown RBP11.27□□□□□ -0.61
CCE1YKL011C MRM1P25270 412 aa11.26□□□□□ -0.61
CCE1YKL011C RTG1P32607 177 aa11.24□□□□□ -0.61
CCE1YKL011C YOL036WQ08206 761 aa11.22□□□□□ -0.61
CCE1YKL011C TRP5P00931 707 aaKnown RBP11.2□□□□□ -0.62
CCE1YKL011C SET4P42948 560 aa11.2□□□□□ -0.62
CCE1YKL011C NCR1Q12200 1170 aa11.17□□□□□ -0.62
CCE1YKL011C YNL035CP53962 389 aaKnown RBP11.12□□□□□ -0.63
CCE1YKL011C SEC61P32915 480 aa11.1□□□□□ -0.63
CCE1YKL011C YMR1P47147 688 aaKnown RBP RIP-Chip data11.08□□□□□ -0.64not detected
CCE1YKL011C DBP1P24784 617 aaKnown RBP11.06□□□□□ -0.64
CCE1YKL011C VPS29P38759 282 aa11.05□□□□□ -0.64
CCE1YKL011C VMA1P17255 1071 aaKnown RBP11.03□□□□□ -0.64
CCE1YKL011C YFR006WP43590 535 aa11.02□□□□□ -0.65
CCE1YKL011C SAM3Q08986 587 aa11.01□□□□□ -0.65
CCE1YKL011C STS1P38637 319 aa10.98□□□□□ -0.65
CCE1YKL011C TFA1P36100 482 aa10.93□□□□□ -0.66
CCE1YKL011C ARP8Q12386 881 aaKnown RBP RIP-Chip data10.93□□□□□ -0.66not detected
CCE1YKL011C RTG3P38165 486 aa10.92□□□□□ -0.66
CCE1YKL011C TFG1P41895 735 aaPredicted RBP10.92□□□□□ -0.66
CCE1YKL011C DAN4P47179 1161 aa10.92□□□□□ -0.66
CCE1YKL011C SAP30P38429 201 aa10.91□□□□□ -0.66
CCE1YKL011C CST9Q06032 482 aa10.91□□□□□ -0.66
CCE1YKL011C SSP1P38871 571 aa10.9□□□□□ -0.66
CCE1YKL011C BCK2P33306 851 aa10.89□□□□□ -0.67
CCE1YKL011C JIP4Q03361 876 aa10.85□□□□□ -0.67
CCE1YKL011C CHL1P22516 861 aaPredicted RBP10.83□□□□□ -0.68
CCE1YKL011C YDL129WQ07555 291 aa10.83□□□□□ -0.68
CCE1YKL011C ABP1P15891 592 aaKnown RBP10.8□□□□□ -0.68
CCE1YKL011C PRE3P38624 215 aa10.78□□□□□ -0.68
CCE1YKL011C RCR1P38212 213 aa10.77□□□□□ -0.69
CCE1YKL011C MGA2P40578 1113 aa10.77□□□□□ -0.69
CCE1YKL011C GYP5Q12344 894 aa10.77□□□□□ -0.69
Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms