RNA–Protein interactions for RNA: YLR275W

SMD2, Transcript of Core Sm protein Sm D2, yeastyeast

Gene SMD2, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD2YLR275W MTC1P47018 478 aaKnown RBP14.8□□□□□ -0.04
SMD2YLR275W DRS1P32892 752 aaKnown RBP14.39□□□□□ -0.11
SMD2YLR275W FAP1P53971 965 aa12.69□□□□□ -0.38
SMD2YLR275W DIP2Q12220 943 aaPredicted RBP12.41□□□□□ -0.42
SMD2YLR275W BFR2Q06631 534 aaKnown RBP12.24□□□□□ -0.45
SMD2YLR275W PRI1P10363 409 aa12.16□□□□□ -0.46
SMD2YLR275W ISW2Q08773 1120 aa12.16□□□□□ -0.46
SMD2YLR275W AVT3P36062 692 aa12.11□□□□□ -0.47
SMD2YLR275W AAD16Q02895 342 aa12.01□□□□□ -0.49
SMD2YLR275W RPG1P38249 964 aaKnown RBP12□□□□□ -0.49
SMD2YLR275W PRY3P47033 881 aa11.89□□□□□ -0.51
SMD2YLR275W RSE1Q04693 1361 aaKnown RBP11.84□□□□□ -0.51
SMD2YLR275W TSR3Q12094 313 aaKnown RBP11.52□□□□□ -0.57
SMD2YLR275W RPL17AP05740 184 aaKnown RBP11.43□□□□□ -0.58
SMD2YLR275W RPL17BP46990 184 aaKnown RBP11.43□□□□□ -0.58
SMD2YLR275W REB1P21538 810 aa11.34□□□□□ -0.59
SMD2YLR275W YCK3P39962 524 aa11.21□□□□□ -0.61
SMD2YLR275W HAA1Q12753 694 aaKnown RBP11.2□□□□□ -0.62
SMD2YLR275W TFA1P36100 482 aa11.17□□□□□ -0.62
SMD2YLR275W MRPL32P25348 183 aa11.08□□□□□ -0.64
SMD2YLR275W SPT21P35209 758 aa10.97□□□□□ -0.65
SMD2YLR275W YKR023WP36119 530 aaKnown RBP10.72□□□□□ -0.69
SMD2YLR275W RIM101P33400 625 aa10.71□□□□□ -0.69
SMD2YLR275W CDC27P38042 758 aa10.6□□□□□ -0.71
SMD2YLR275W TFC8Q12308 588 aa10.51□□□□□ -0.73
SMD2YLR275W HOP09932 586 aa10.5□□□□□ -0.73
SMD2YLR275W YGL015CP33199 130 aa10.47□□□□□ -0.73
SMD2YLR275W DCD1P06773 312 aa10.43□□□□□ -0.74
SMD2YLR275W OXP1P28273 1286 aa10.36□□□□□ -0.75
SMD2YLR275W UBP10P53874 792 aaPredicted RBP10.26□□□□□ -0.77
SMD2YLR275W YIL055CP40523 627 aaKnown RBP10.24□□□□□ -0.77
SMD2YLR275W MAP2P38174 421 aaKnown RBP10.22□□□□□ -0.77
SMD2YLR275W PTP3P40048 928 aa10.2□□□□□ -0.78
SMD2YLR275W BCH2P36122 765 aa10.18□□□□□ -0.78
SMD2YLR275W YAH1Q12184 172 aaKnown RBP10.15□□□□□ -0.78
SMD2YLR275W SCY1P53009 804 aa10.12□□□□□ -0.79
SMD2YLR275W RSM7P47150 247 aa10.07□□□□□ -0.8
SMD2YLR275W SSP1P38871 571 aa10.03□□□□□ -0.8
SMD2YLR275W YLR271WQ06152 274 aa9.99□□□□□ -0.81
SMD2YLR275W EPS1P40557 701 aa9.98□□□□□ -0.81
SMD2YLR275W SLX5P32828 619 aaKnown RBP9.97□□□□□ -0.81
SMD2YLR275W AI2P03876 854 aa9.93□□□□□ -0.82
SMD2YLR275W ARP8Q12386 881 aaKnown RBP RIP-Chip data9.93□□□□□ -0.82not detected
SMD2YLR275W BBC1P47068 1157 aa9.92□□□□□ -0.82
SMD2YLR275W BDF1P35817 686 aa9.91□□□□□ -0.82
SMD2YLR275W TIF4632P39936 914 aaKnown RBP9.85□□□□□ -0.83
SMD2YLR275W PSD2P53037 1138 aaKnown RBP9.79□□□□□ -0.84
SMD2YLR275W TGL3P40308 642 aa9.77□□□□□ -0.85
SMD2YLR275W MGA2P40578 1113 aa9.73□□□□□ -0.85
SMD2YLR275W CST9Q06032 482 aa9.67□□□□□ -0.86
SMD2YLR275W MRM1P25270 412 aa9.61□□□□□ -0.87
SMD2YLR275W NSR1P27476 414 aaKnown RBP RIP-Chip data9.52□□□□□ -0.89not detected
SMD2YLR275W YAP5P40574 245 aa9.46□□□□□ -0.9
SMD2YLR275W RTG3P38165 486 aa9.45□□□□□ -0.9
SMD2YLR275W YOR238WQ08634 303 aa9.44□□□□□ -0.9
SMD2YLR275W MST1P07236 462 aa9.42□□□□□ -0.9
SMD2YLR275W RCR1P38212 213 aa9.38□□□□□ -0.91
SMD2YLR275W VPS29P38759 282 aa9.37□□□□□ -0.91
SMD2YLR275W BUD31P25337 157 aaPredicted RBP9.34□□□□□ -0.91
SMD2YLR275W YMR1P47147 688 aaKnown RBP RIP-Chip data9.34□□□□□ -0.91not detected
SMD2YLR275W UBP9P39967 754 aa9.32□□□□□ -0.92
SMD2YLR275W PIB1Q06651 286 aa9.3□□□□□ -0.92
SMD2YLR275W DBP1P24784 617 aaKnown RBP9.28□□□□□ -0.92
SMD2YLR275W STS1P38637 319 aa9.26□□□□□ -0.93
SMD2YLR275W RAM2P29703 316 aa9.25□□□□□ -0.93
SMD2YLR275W GTT3P39996 337 aa9.25□□□□□ -0.93
SMD2YLR275W YFR006WP43590 535 aa9.25□□□□□ -0.93
SMD2YLR275W YBL029C-AQ3E756 94 aa9.18□□□□□ -0.94
SMD2YLR275W MAK11P20484 414 aaKnown RBP9.17□□□□□ -0.94
SMD2YLR275W VMA1P17255 1071 aaKnown RBP9.14□□□□□ -0.95
SMD2YLR275W WSC3Q12215 556 aa9.14□□□□□ -0.95
SMD2YLR275W VNX1P42839 908 aa9.12□□□□□ -0.95
SMD2YLR275W SAM3Q08986 587 aa9.07□□□□□ -0.96
SMD2YLR275W MIF2P35201 549 aa9.06□□□□□ -0.96
SMD2YLR275W SPP1Q03012 353 aa9.05□□□□□ -0.96
SMD2YLR275W COQ8P27697 501 aa9.04□□□□□ -0.96
SMD2YLR275W YOL036WQ08206 761 aa9.04□□□□□ -0.96
SMD2YLR275W MSB4Q12317 492 aa9.04□□□□□ -0.96
SMD2YLR275W SET4P42948 560 aa9.02□□□□□ -0.97
SMD2YLR275W EDS1P38073 919 aa9.01□□□□□ -0.97
SMD2YLR275W DMA1P38823 416 aa9.01□□□□□ -0.97
SMD2YLR275W TIF11P38912 153 aaKnown RBP9.01□□□□□ -0.97
SMD2YLR275W RQC2Q12532 1038 aaKnown RBP8.98□□□□□ -0.97
SMD2YLR275W GYP5Q12344 894 aa8.97□□□□□ -0.97
SMD2YLR275W PTC3P34221 468 aaKnown RBP8.96□□□□□ -0.98
SMD2YLR275W EAP1P36041 632 aaKnown RBP8.96□□□□□ -0.98
SMD2YLR275W SIS1P25294 352 aaKnown RBP8.95□□□□□ -0.98
SMD2YLR275W SET1P38827 1080 aaKnown RBP8.95□□□□□ -0.98
SMD2YLR275W ULI1P43604 169 aa8.95□□□□□ -0.98
SMD2YLR275W ABP1P15891 592 aaKnown RBP8.94□□□□□ -0.98
SMD2YLR275W NOP53Q12080 455 aaKnown RBP8.94□□□□□ -0.98
SMD2YLR275W GRE2Q12068 342 aaKnown RBP8.93□□□□□ -0.98
SMD2YLR275W ATH1P48016 1211 aa8.9□□□□□ -0.98
SMD2YLR275W TRP5P00931 707 aaKnown RBP8.89□□□□□ -0.99
SMD2YLR275W DCW1P36091 449 aa8.89□□□□□ -0.99
SMD2YLR275W IOC2Q12072 812 aa8.89□□□□□ -0.99
SMD2YLR275W HTA1P04911 132 aaKnown RBP8.87□□□□□ -0.99
SMD2YLR275W HTA2P04912 132 aa8.87□□□□□ -0.99
SMD2YLR275W GUT1P32190 709 aa8.87□□□□□ -0.99
SMD2YLR275W LDB19Q12502 818 aa8.87□□□□□ -0.99
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms