Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRGV1A0A0A0MS02 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRGV1A0A0A0MS02 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRGV1A0A0A0MS02 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRGV1A0A0A0MS02 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRGV1A0A0A0MS02 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRGV1A0A0A0MS02 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRGV1A0A0A0MS02 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRGV1A0A0A0MS02 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRGV1A0A0A0MS02 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRGV1A0A0A0MS02 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
TRGV1A0A0A0MS02 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC15.46■□□□□ 0.07
TRGV1A0A0A0MS02 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC15.46■□□□□ 0.07
TRGV1A0A0A0MS02 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRGV1A0A0A0MS02 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC15.46■□□□□ 0.07
TRGV1A0A0A0MS02 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC15.46■□□□□ 0.07
TRGV1A0A0A0MS02 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC15.46■□□□□ 0.07
TRGV1A0A0A0MS02 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRGV1A0A0A0MS02 GRAMD4P4-201ENST00000613563 1115 ntBASIC15.46■□□□□ 0.07
TRGV1A0A0A0MS02 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRGV1A0A0A0MS02 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC15.46■□□□□ 0.06
TRGV1A0A0A0MS02 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC15.46■□□□□ 0.06
TRGV1A0A0A0MS02 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC15.46■□□□□ 0.06
TRGV1A0A0A0MS02 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TRGV1A0A0A0MS02 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
TRGV1A0A0A0MS02 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC15.45■□□□□ 0.06
TRGV1A0A0A0MS02 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC15.45■□□□□ 0.06
TRGV1A0A0A0MS02 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRGV1A0A0A0MS02 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC15.45■□□□□ 0.06
TRGV1A0A0A0MS02 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRGV1A0A0A0MS02 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRGV1A0A0A0MS02 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
TRGV1A0A0A0MS02 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRGV1A0A0A0MS02 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
TRGV1A0A0A0MS02 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRGV1A0A0A0MS02 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRGV1A0A0A0MS02 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRGV1A0A0A0MS02 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC15.45■□□□□ 0.06
TRGV1A0A0A0MS02 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
TRGV1A0A0A0MS02 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC15.45■□□□□ 0.06
TRGV1A0A0A0MS02 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC15.45■□□□□ 0.06
TRGV1A0A0A0MS02 AC106739.1-201ENST00000617035 715 ntBASIC15.45■□□□□ 0.06
TRGV1A0A0A0MS02 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRGV1A0A0A0MS02 RALB-208ENST00000631312 311 ntTSL 5 BASIC15.45■□□□□ 0.06
TRGV1A0A0A0MS02 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC15.45■□□□□ 0.06
TRGV1A0A0A0MS02 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRGV1A0A0A0MS02 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRGV1A0A0A0MS02 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRGV1A0A0A0MS02 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
TRGV1A0A0A0MS02 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRGV1A0A0A0MS02 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
TRGV1A0A0A0MS02 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRGV1A0A0A0MS02 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRGV1A0A0A0MS02 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
TRGV1A0A0A0MS02 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRGV1A0A0A0MS02 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRGV1A0A0A0MS02 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRGV1A0A0A0MS02 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRGV1A0A0A0MS02 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC15.44■□□□□ 0.06
TRGV1A0A0A0MS02 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRGV1A0A0A0MS02 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRGV1A0A0A0MS02 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRGV1A0A0A0MS02 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRGV1A0A0A0MS02 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRGV1A0A0A0MS02 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRGV1A0A0A0MS02 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC15.44■□□□□ 0.06
TRGV1A0A0A0MS02 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRGV1A0A0A0MS02 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRGV1A0A0A0MS02 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
TRGV1A0A0A0MS02 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRGV1A0A0A0MS02 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC15.44■□□□□ 0.06
TRGV1A0A0A0MS02 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRGV1A0A0A0MS02 GRAMD4P2-201ENST00000423297 1097 ntBASIC15.44■□□□□ 0.06
TRGV1A0A0A0MS02 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
TRGV1A0A0A0MS02 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRGV1A0A0A0MS02 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRGV1A0A0A0MS02 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRGV1A0A0A0MS02 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRGV1A0A0A0MS02 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRGV1A0A0A0MS02 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC15.44■□□□□ 0.06
TRGV1A0A0A0MS02 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRGV1A0A0A0MS02 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC15.43■□□□□ 0.06
TRGV1A0A0A0MS02 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRGV1A0A0A0MS02 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
TRGV1A0A0A0MS02 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRGV1A0A0A0MS02 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC15.43■□□□□ 0.06
TRGV1A0A0A0MS02 AC099791.1-201ENST00000416440 715 ntBASIC15.43■□□□□ 0.06
TRGV1A0A0A0MS02 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC15.43■□□□□ 0.06
TRGV1A0A0A0MS02 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC15.43■□□□□ 0.06
TRGV1A0A0A0MS02 AC027682.1-201ENST00000562846 899 ntBASIC15.43■□□□□ 0.06
TRGV1A0A0A0MS02 AL034346.1-201ENST00000568244 1277 ntBASIC15.43■□□□□ 0.06
TRGV1A0A0A0MS02 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRGV1A0A0A0MS02 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
TRGV1A0A0A0MS02 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC15.43■□□□□ 0.06
TRGV1A0A0A0MS02 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRGV1A0A0A0MS02 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC15.43■□□□□ 0.06
TRGV1A0A0A0MS02 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRGV1A0A0A0MS02 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRGV1A0A0A0MS02 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRGV1A0A0A0MS02 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms