Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC23.92■■□□□ 1.42
BLOC1S4Q9NUP1 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
BLOC1S4Q9NUP1 BX005040.4-201ENST00000637145 1518 ntBASIC23.91■■□□□ 1.42
BLOC1S4Q9NUP1 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
BLOC1S4Q9NUP1 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
BLOC1S4Q9NUP1 IRS3P-201ENST00000223076 1006 ntBASIC23.91■■□□□ 1.42
BLOC1S4Q9NUP1 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
BLOC1S4Q9NUP1 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
BLOC1S4Q9NUP1 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
BLOC1S4Q9NUP1 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC23.91■■□□□ 1.42
BLOC1S4Q9NUP1 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC23.91■■□□□ 1.42
BLOC1S4Q9NUP1 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC23.91■■□□□ 1.42
BLOC1S4Q9NUP1 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC23.91■■□□□ 1.42
BLOC1S4Q9NUP1 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC23.91■■□□□ 1.42
BLOC1S4Q9NUP1 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC23.91■■□□□ 1.42
BLOC1S4Q9NUP1 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
BLOC1S4Q9NUP1 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC23.91■■□□□ 1.42
BLOC1S4Q9NUP1 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
BLOC1S4Q9NUP1 AC003102.1-202ENST00000563394 1796 ntBASIC23.91■■□□□ 1.42
BLOC1S4Q9NUP1 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
BLOC1S4Q9NUP1 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC23.9■■□□□ 1.42
BLOC1S4Q9NUP1 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC23.9■■□□□ 1.42
BLOC1S4Q9NUP1 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
BLOC1S4Q9NUP1 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
BLOC1S4Q9NUP1 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC23.9■■□□□ 1.42
BLOC1S4Q9NUP1 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
BLOC1S4Q9NUP1 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC23.9■■□□□ 1.42
BLOC1S4Q9NUP1 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
BLOC1S4Q9NUP1 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
BLOC1S4Q9NUP1 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
BLOC1S4Q9NUP1 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC23.89■■□□□ 1.42
BLOC1S4Q9NUP1 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC23.89■■□□□ 1.41
BLOC1S4Q9NUP1 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
BLOC1S4Q9NUP1 ZNRF2P3-201ENST00000424200 374 ntBASIC23.89■■□□□ 1.41
BLOC1S4Q9NUP1 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
BLOC1S4Q9NUP1 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC23.89■■□□□ 1.41
BLOC1S4Q9NUP1 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC23.89■■□□□ 1.41
BLOC1S4Q9NUP1 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
BLOC1S4Q9NUP1 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
BLOC1S4Q9NUP1 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC23.89■■□□□ 1.41
BLOC1S4Q9NUP1 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
BLOC1S4Q9NUP1 AC055733.4-201ENST00000638462 1354 ntBASIC23.89■■□□□ 1.41
BLOC1S4Q9NUP1 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
BLOC1S4Q9NUP1 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
BLOC1S4Q9NUP1 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC23.88■■□□□ 1.41
BLOC1S4Q9NUP1 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
BLOC1S4Q9NUP1 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
BLOC1S4Q9NUP1 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
BLOC1S4Q9NUP1 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
BLOC1S4Q9NUP1 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
BLOC1S4Q9NUP1 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
BLOC1S4Q9NUP1 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC23.88■■□□□ 1.41
BLOC1S4Q9NUP1 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC23.88■■□□□ 1.41
BLOC1S4Q9NUP1 AL354811.1-201ENST00000610286 706 ntBASIC23.88■■□□□ 1.41
BLOC1S4Q9NUP1 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC23.88■■□□□ 1.41
BLOC1S4Q9NUP1 MIR6084-201ENST00000622012 110 ntBASIC23.88■■□□□ 1.41
BLOC1S4Q9NUP1 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
BLOC1S4Q9NUP1 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC23.88■■□□□ 1.41
BLOC1S4Q9NUP1 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC23.88■■□□□ 1.41
BLOC1S4Q9NUP1 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
BLOC1S4Q9NUP1 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC23.87■■□□□ 1.41
BLOC1S4Q9NUP1 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
BLOC1S4Q9NUP1 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
BLOC1S4Q9NUP1 MPST-204ENST00000404393 1329 ntTSL 5 BASIC23.87■■□□□ 1.41
BLOC1S4Q9NUP1 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC23.87■■□□□ 1.41
BLOC1S4Q9NUP1 AC005224.4-201ENST00000583262 1652 ntBASIC23.87■■□□□ 1.41
BLOC1S4Q9NUP1 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC23.87■■□□□ 1.41
BLOC1S4Q9NUP1 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
BLOC1S4Q9NUP1 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
BLOC1S4Q9NUP1 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC23.87■■□□□ 1.41
BLOC1S4Q9NUP1 TPRG1LP1-201ENST00000598702 760 ntBASIC23.87■■□□□ 1.41
BLOC1S4Q9NUP1 AL358852.1-201ENST00000623174 1268 ntBASIC23.87■■□□□ 1.41
BLOC1S4Q9NUP1 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC23.87■■□□□ 1.41
BLOC1S4Q9NUP1 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
BLOC1S4Q9NUP1 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
BLOC1S4Q9NUP1 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
BLOC1S4Q9NUP1 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC23.86■■□□□ 1.41
BLOC1S4Q9NUP1 AC009237.3-201ENST00000393279 1427 ntBASIC23.86■■□□□ 1.41
BLOC1S4Q9NUP1 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
BLOC1S4Q9NUP1 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
BLOC1S4Q9NUP1 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
BLOC1S4Q9NUP1 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
BLOC1S4Q9NUP1 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
BLOC1S4Q9NUP1 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
BLOC1S4Q9NUP1 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
BLOC1S4Q9NUP1 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
BLOC1S4Q9NUP1 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC23.85■■□□□ 1.41
BLOC1S4Q9NUP1 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
BLOC1S4Q9NUP1 AC244015.2-201ENST00000616358 1861 ntBASIC23.85■■□□□ 1.41
BLOC1S4Q9NUP1 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
BLOC1S4Q9NUP1 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
BLOC1S4Q9NUP1 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
BLOC1S4Q9NUP1 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC23.84■■□□□ 1.41
BLOC1S4Q9NUP1 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC23.84■■□□□ 1.41
BLOC1S4Q9NUP1 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
BLOC1S4Q9NUP1 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
BLOC1S4Q9NUP1 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
BLOC1S4Q9NUP1 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
BLOC1S4Q9NUP1 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC23.84■■□□□ 1.41
BLOC1S4Q9NUP1 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms