Protein–RNA interactions for Protein: P40965

MSH4, MutS protein homolog 4, yeastyeast

Predicted RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH4P40965 ORC6YHR118C 1308 nt5.24□□□□□ -1.57
MSH4P40965 SAP4YGL229C 2457 nt5.24□□□□□ -1.57
MSH4P40965 BOP2YLR267W 1713 nt5.24□□□□□ -1.57
MSH4P40965 YCL075WYCL075W 441 nt5.24□□□□□ -1.57
MSH4P40965 ECM11YDR446W 909 nt5.24□□□□□ -1.57
MSH4P40965 YGR045CYGR045C 363 nt5.24□□□□□ -1.57
MSH4P40965 YHL034W-AYHL034W-A 462 nt5.24□□□□□ -1.57
MSH4P40965 SYM1YLR251W 594 nt5.24□□□□□ -1.57
MSH4P40965 YLR252WYLR252W 306 nt5.24□□□□□ -1.57
MSH4P40965 GIM5YML094W 492 nt5.24□□□□□ -1.57
MSH4P40965 INA17YPL099C 549 nt5.24□□□□□ -1.57
MSH4P40965 FOX2YKR009C 2703 nt5.24□□□□□ -1.57
MSH4P40965 YFL002W-BYFL002W-B 1317 nt5.23□□□□□ -1.57
MSH4P40965 YGR161W-AYGR161W-A 1317 nt5.23□□□□□ -1.57
MSH4P40965 YBL100W-AYBL100W-A 1317 nt5.23□□□□□ -1.57
MSH4P40965 YOR192C-AYOR192C-A 1317 nt5.23□□□□□ -1.57
MSH4P40965 YOR343W-AYOR343W-A 1317 nt5.23□□□□□ -1.57
MSH4P40965 YCL020WYCL020W 1317 nt5.23□□□□□ -1.57
MSH4P40965 AGE1YDR524C 1449 nt5.23□□□□□ -1.57
MSH4P40965 BSC1YDL037C 987 nt5.23□□□□□ -1.57
MSH4P40965 MGT1YDL200C 567 nt5.23□□□□□ -1.57
MSH4P40965 GUK1YDR454C 564 nt5.23□□□□□ -1.57
MSH4P40965 YFL051CYFL051C 483 nt5.23□□□□□ -1.57
MSH4P40965 YVH1YIR026C 1095 nt5.23□□□□□ -1.57
MSH4P40965 YKL023C-AYKL023C-A 228 nt5.23□□□□□ -1.57
MSH4P40965 TSR4YOL022C 1227 nt5.23□□□□□ -1.57
MSH4P40965 YOR029WYOR029W 336 nt5.23□□□□□ -1.57
MSH4P40965 ICY2YPL250C 411 nt5.23□□□□□ -1.57
MSH4P40965 VPS69YPR087W 321 nt5.23□□□□□ -1.57
MSH4P40965 OPY1YBR129C 987 nt5.23□□□□□ -1.57
MSH4P40965 UBX3YDL091C 1368 nt5.23□□□□□ -1.57
MSH4P40965 FRT2YAL028W 1587 nt5.23□□□□□ -1.57
MSH4P40965 APC1YNL172W 5247 nt5.23□□□□□ -1.57
MSH4P40965 TGL4YKR089C 2733 nt5.23□□□□□ -1.57
MSH4P40965 GSY1YFR015C 2127 nt5.23□□□□□ -1.57
MSH4P40965 AVT1YJR001W 1809 nt5.23□□□□□ -1.57
MSH4P40965 LAS1YKR063C 1509 nt5.23□□□□□ -1.57
MSH4P40965 CST9YLR394W 1449 nt5.23□□□□□ -1.57
MSH4P40965 TRM11YOL124C 1302 nt5.23□□□□□ -1.57
MSH4P40965 UBP10YNL186W 2379 nt5.22□□□□□ -1.57
MSH4P40965 BCH2YKR027W 2298 nt5.22□□□□□ -1.57
MSH4P40965 YDR131CYDR131C 1671 nt5.22□□□□□ -1.57
MSH4P40965 HAP4YKL109W 1665 nt5.22□□□□□ -1.57
MSH4P40965 GWT1YJL091C 1473 nt5.22□□□□□ -1.57
MSH4P40965 RXT3YDL076C 885 nt5.22□□□□□ -1.57
MSH4P40965 BCP1YDR361C 852 nt5.22□□□□□ -1.57
MSH4P40965 TMA20YER007C-A 546 nt5.22□□□□□ -1.57
MSH4P40965 KTR2YKR061W 1278 nt5.22□□□□□ -1.57
MSH4P40965 MRPL3YMR024W 1173 nt5.22□□□□□ -1.57
MSH4P40965 HFA1YMR207C 6372 nt5.22□□□□□ -1.57
MSH4P40965 ERV15YBR210W 429 nt5.22□□□□□ -1.57
MSH4P40965 STV1YMR054W 2673 nt5.22□□□□□ -1.57
MSH4P40965 KGD1YIL125W 3045 nt5.22□□□□□ -1.57
MSH4P40965 RRB1YMR131C 1536 nt5.22□□□□□ -1.57
MSH4P40965 RIM1YCR028C-A 408 nt5.21□□□□□ -1.58
MSH4P40965 YDR461C-AYDR461C-A 243 nt5.21□□□□□ -1.58
MSH4P40965 YER145C-AYER145C-A 438 nt5.21□□□□□ -1.58
MSH4P40965 AGA2YGL032C 264 nt5.21□□□□□ -1.58
MSH4P40965 tL(UAG)JtL(UAG)J 82 nt5.21□□□□□ -1.58
MSH4P40965 tL(UAG)L1tL(UAG)L1 82 nt5.21□□□□□ -1.58
MSH4P40965 tL(UAG)L2tL(UAG)L2 82 nt5.21□□□□□ -1.58
MSH4P40965 ATG27YJL178C 816 nt5.21□□□□□ -1.58
MSH4P40965 PSF3YOL146W 585 nt5.21□□□□□ -1.58
MSH4P40965 ATX2YOR079C 942 nt5.21□□□□□ -1.58
MSH4P40965 YOR199WYOR199W 330 nt5.21□□□□□ -1.58
MSH4P40965 THI7YLR237W 1797 nt5.21□□□□□ -1.58
MSH4P40965 NTA1YJR062C 1374 nt5.2□□□□□ -1.58
MSH4P40965 PEA2YER149C 1263 nt5.2□□□□□ -1.58
MSH4P40965 YKL131WYKL131W 522 nt5.2□□□□□ -1.58
MSH4P40965 YKR011CYKR011C 1062 nt5.2□□□□□ -1.58
MSH4P40965 HTA2YBL003C 399 nt5.2□□□□□ -1.58
MSH4P40965 MCM1YMR043W 861 nt5.2□□□□□ -1.58
MSH4P40965 SPN1YPR133C 1233 nt5.2□□□□□ -1.58
MSH4P40965 POL30YBR088C 777 nt5.2□□□□□ -1.58
MSH4P40965 SMP3YOR149C 1551 nt5.2□□□□□ -1.58
MSH4P40965 PAN1YIR006C 4443 nt5.19□□□□□ -1.58
MSH4P40965 SKG6YHR149C 2205 nt5.19□□□□□ -1.58
MSH4P40965 AZR1YGR224W 1842 nt5.19□□□□□ -1.58
MSH4P40965 UBC13YDR092W 462 nt5.19□□□□□ -1.58
MSH4P40965 TOS8YGL096W 831 nt5.19□□□□□ -1.58
MSH4P40965 FMC1YIL098C 468 nt5.19□□□□□ -1.58
MSH4P40965 YMR001C-AYMR001C-A 231 nt5.19□□□□□ -1.58
MSH4P40965 UGA3YDL170W 1587 nt5.19□□□□□ -1.58
MSH4P40965 THS1YIL078W 2205 nt5.18□□□□□ -1.58
MSH4P40965 PHO13YDL236W 939 nt5.18□□□□□ -1.58
MSH4P40965 YGR018CYGR018C 330 nt5.18□□□□□ -1.58
MSH4P40965 tS(AGA)D3tS(AGA)D3 83 nt5.18□□□□□ -1.58
MSH4P40965 PEP8YJL053W 1140 nt5.18□□□□□ -1.58
MSH4P40965 EAF6YJR082C 342 nt5.18□□□□□ -1.58
MSH4P40965 YJR087WYJR087W 351 nt5.18□□□□□ -1.58
MSH4P40965 YLR400WYLR400W 474 nt5.18□□□□□ -1.58
MSH4P40965 RIM11YMR139W 1113 nt5.18□□□□□ -1.58
MSH4P40965 RPB5YBR154C 648 nt5.18□□□□□ -1.58
MSH4P40965 ARL1YBR164C 552 nt5.18□□□□□ -1.58
MSH4P40965 SRS2YJL092W 3525 nt5.18□□□□□ -1.58
MSH4P40965 PHO84YML123C 1764 nt5.18□□□□□ -1.58
MSH4P40965 AGA1YNR044W 2178 nt5.18□□□□□ -1.58
MSH4P40965 RRN7YJL025W 1545 nt5.18□□□□□ -1.58
MSH4P40965 MNN1YER001W 2289 nt5.17□□□□□ -1.58
MSH4P40965 GAD1YMR250W 1758 nt5.17□□□□□ -1.58
Retrieved 100 of 7,029 protein–RNA pairs in 57.8 ms