RNA–Protein interactions for RNA: YJR001W

AVT1, Transcript of Vacuolar transporter, yeastyeast

Gene AVT1, Length 1,809 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AVT1YJR001W DRS1P32892 752 aaKnown RBP8.65□□□□□ -1.02
AVT1YJR001W FAP1P53971 965 aa8.29□□□□□ -1.08
AVT1YJR001W TFA1P36100 482 aa8.21□□□□□ -1.1
AVT1YJR001W RQC2Q12532 1038 aaKnown RBP7.94□□□□□ -1.14
AVT1YJR001W BFR2Q06631 534 aaKnown RBP7.92□□□□□ -1.14
AVT1YJR001W PRY3P47033 881 aa7.85□□□□□ -1.15
AVT1YJR001W TAF7Q05021 590 aa7.79□□□□□ -1.16
AVT1YJR001W MTC1P47018 478 aaKnown RBP7.61□□□□□ -1.19
AVT1YJR001W HAA1Q12753 694 aaKnown RBP7.35□□□□□ -1.23
AVT1YJR001W AVT3P36062 692 aa7.27□□□□□ -1.25
AVT1YJR001W YCK3P39962 524 aa7.2□□□□□ -1.26
AVT1YJR001W DMA1P38823 416 aa7.15□□□□□ -1.27
AVT1YJR001W LEO1P38439 464 aa7.1□□□□□ -1.27
AVT1YJR001W DIP2Q12220 943 aaPredicted RBP7.04□□□□□ -1.28
AVT1YJR001W AAD16Q02895 342 aa6.95□□□□□ -1.3
AVT1YJR001W BUD31P25337 157 aaPredicted RBP6.8□□□□□ -1.32
AVT1YJR001W PRI1P10363 409 aa6.67□□□□□ -1.34
AVT1YJR001W LEU3P08638 886 aa6.62□□□□□ -1.35
AVT1YJR001W URN1Q06525 465 aaKnown RBP6.57□□□□□ -1.36
AVT1YJR001W DMA2P53924 522 aa6.5□□□□□ -1.37
AVT1YJR001W NAP1P25293 417 aaKnown RBP6.49□□□□□ -1.37
AVT1YJR001W IFH1P39520 1085 aa6.49□□□□□ -1.37
AVT1YJR001W SAS10Q12136 610 aaPredicted RBP6.48□□□□□ -1.37
AVT1YJR001W PTP3P40048 928 aa6.47□□□□□ -1.37
AVT1YJR001W ABP1P15891 592 aaKnown RBP6.46□□□□□ -1.37
AVT1YJR001W AIM44Q99299 758 aa6.45□□□□□ -1.38
AVT1YJR001W IOC4Q04213 475 aa6.43□□□□□ -1.38
AVT1YJR001W YGL015CP33199 130 aa6.41□□□□□ -1.38
AVT1YJR001W RLF2Q12495 606 aa6.39□□□□□ -1.39
AVT1YJR001W RPN1P38764 993 aaKnown RBP6.34□□□□□ -1.39
AVT1YJR001W ORC1P54784 914 aaPredicted RBP6.33□□□□□ -1.4
AVT1YJR001W RSE1Q04693 1361 aaKnown RBP6.33□□□□□ -1.4
AVT1YJR001W SIS1P25294 352 aaKnown RBP6.3□□□□□ -1.4
AVT1YJR001W SSP1P38871 571 aa6.25□□□□□ -1.41
AVT1YJR001W SGS1P35187 1447 aa6.21□□□□□ -1.42
AVT1YJR001W CKB1P43639 278 aa6.19□□□□□ -1.42
AVT1YJR001W SIS2P36024 562 aa6.17□□□□□ -1.42
AVT1YJR001W TSR3Q12094 313 aaKnown RBP6.13□□□□□ -1.43
AVT1YJR001W YRB30P53107 440 aaPredicted RBP6.13□□□□□ -1.43
AVT1YJR001W YML020WQ03722 664 aa6.12□□□□□ -1.43
AVT1YJR001W NOP8Q08287 484 aaPredicted RBP6.11□□□□□ -1.43
AVT1YJR001W INO80P53115 1489 aa6.1□□□□□ -1.43
AVT1YJR001W RIM101P33400 625 aa6.09□□□□□ -1.44
AVT1YJR001W TOP1P04786 769 aa6.08□□□□□ -1.44
AVT1YJR001W EBP2P36049 427 aaKnown RBP6.07□□□□□ -1.44
AVT1YJR001W YFR016CP43597 1233 aaKnown RBP6.04□□□□□ -1.44
AVT1YJR001W RPL17AP05740 184 aaKnown RBP6.03□□□□□ -1.44
AVT1YJR001W CAB3P36076 571 aa6.03□□□□□ -1.44
AVT1YJR001W RPL17BP46990 184 aaKnown RBP6.03□□□□□ -1.44
AVT1YJR001W MRPL32P25348 183 aa6.02□□□□□ -1.45
AVT1YJR001W SNU71P53207 620 aaKnown RBP6.02□□□□□ -1.45
AVT1YJR001W TCB3Q03640 1545 aaKnown RBP6.02□□□□□ -1.45
AVT1YJR001W SPB4P25808 606 aaPredicted RBP6.02□□□□□ -1.45
AVT1YJR001W SLX8P40072 274 aa6□□□□□ -1.45
AVT1YJR001W ARP8Q12386 881 aaKnown RBP RIP-Chip data5.99□□□□□ -1.45not detected
AVT1YJR001W TY1B-DR4Q07793 1604 aa5.97□□□□□ -1.45
AVT1YJR001W SPA2P23201 1466 aaKnown RBP5.95□□□□□ -1.46
AVT1YJR001W MON2P48563 1636 aaPredicted RBP5.95□□□□□ -1.46
AVT1YJR001W YLR271WQ06152 274 aa5.95□□□□□ -1.46
AVT1YJR001W KIN1P13185 1064 aa5.95□□□□□ -1.46
AVT1YJR001W OXP1P28273 1286 aa5.95□□□□□ -1.46
AVT1YJR001W SPT21P35209 758 aa5.95□□□□□ -1.46
AVT1YJR001W RPS0BP46654 252 aaKnown RBP5.95□□□□□ -1.46
AVT1YJR001W NOP7P53261 605 aaKnown RBP5.95□□□□□ -1.46
AVT1YJR001W SSN2P38931 1420 aa5.93□□□□□ -1.46
AVT1YJR001W MGA2P40578 1113 aa5.92□□□□□ -1.46
AVT1YJR001W HGH1P48362 394 aaKnown RBP5.92□□□□□ -1.46
AVT1YJR001W GEF1P37020 779 aa5.92□□□□□ -1.46
AVT1YJR001W BRL1P38770 471 aa5.92□□□□□ -1.46
AVT1YJR001W KRI1P42846 591 aaKnown RBP5.92□□□□□ -1.46
AVT1YJR001W ISW2Q08773 1120 aa5.92□□□□□ -1.46
AVT1YJR001W YAH1Q12184 172 aaKnown RBP5.92□□□□□ -1.46
AVT1YJR001W SSA1P10591 642 aaKnown RBP5.91□□□□□ -1.46
AVT1YJR001W MRX12P47084 519 aa5.89□□□□□ -1.47
AVT1YJR001W YPR148CQ06523 435 aa5.88□□□□□ -1.47
AVT1YJR001W MAM3Q12296 706 aa5.88□□□□□ -1.47
AVT1YJR001W UBP9P39967 754 aa5.87□□□□□ -1.47
AVT1YJR001W VPS70P47161 811 aa5.87□□□□□ -1.47
AVT1YJR001W SUB2Q07478 446 aaKnown RBP5.87□□□□□ -1.47
AVT1YJR001W MNN4P36044 1178 aa5.86□□□□□ -1.47
AVT1YJR001W DSF2P38213 736 aa5.86□□□□□ -1.47
AVT1YJR001W ATG36P46983 293 aa5.86□□□□□ -1.47
AVT1YJR001W YNR021WP53723 404 aaKnown RBP5.86□□□□□ -1.47
AVT1YJR001W HSL1P34244 1518 aa5.85□□□□□ -1.47
AVT1YJR001W PAM1P37304 830 aaKnown RBP5.84□□□□□ -1.47
AVT1YJR001W RPG1P38249 964 aaKnown RBP5.84□□□□□ -1.47
AVT1YJR001W SWR1Q05471 1514 aa5.84□□□□□ -1.48
AVT1YJR001W REB1P21538 810 aa5.83□□□□□ -1.48
AVT1YJR001W SWE1P32944 819 aa5.83□□□□□ -1.48
AVT1YJR001W GUA1P38625 525 aaKnown RBP5.83□□□□□ -1.48
AVT1YJR001W NUG1P40010 520 aaKnown RBP5.83□□□□□ -1.48
AVT1YJR001W SET1P38827 1080 aaKnown RBP5.83□□□□□ -1.48
AVT1YJR001W MET10P39692 1035 aa5.83□□□□□ -1.48
AVT1YJR001W FAR11P53917 953 aa5.83□□□□□ -1.48
AVT1YJR001W SPT6P23615 1451 aaKnown RBP5.82□□□□□ -1.48
AVT1YJR001W BRN1P38170 754 aa5.82□□□□□ -1.48
AVT1YJR001W CST9Q06032 482 aa5.82□□□□□ -1.48
AVT1YJR001W AIM7Q12156 149 aa5.82□□□□□ -1.48
AVT1YJR001W DOS2P54858 310 aa5.81□□□□□ -1.48
AVT1YJR001W LAM6Q08001 693 aa5.81□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms