Protein–RNA interactions for Protein: O13535

TY1B-H, Transposon Ty1-H Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-HO13535 PEX4YGR133W 552 nt3.48□□□□□ -1.85
TY1B-HO13535 SRL3YKR091W 741 nt3.48□□□□□ -1.85
TY1B-HO13535 CUS2YNL286W 858 nt3.48□□□□□ -1.85
TY1B-HO13535 GYP5YPL249C 2685 nt3.48□□□□□ -1.85
TY1B-HO13535 MGM1YOR211C 2646 nt3.47□□□□□ -1.85
TY1B-HO13535 GCV2YMR189W 3105 nt3.47□□□□□ -1.85
TY1B-HO13535 COX2Q0250 756 nt3.47□□□□□ -1.85
TY1B-HO13535 ECI1YLR284C 843 nt3.47□□□□□ -1.85
TY1B-HO13535 ERV41YML067C 1059 nt3.47□□□□□ -1.85
TY1B-HO13535 SEC66YBR171W 621 nt3.47□□□□□ -1.85
TY1B-HO13535 SMC2YFR031C 3513 nt3.47□□□□□ -1.85
TY1B-HO13535 UBP6YFR010W 1500 nt3.47□□□□□ -1.85
TY1B-HO13535 QRI7YDL104C 1224 nt3.46□□□□□ -1.86
TY1B-HO13535 REX4YOL080C 870 nt3.46□□□□□ -1.86
TY1B-HO13535 MCD4YKL165C 2760 nt3.46□□□□□ -1.86
TY1B-HO13535 GIS4YML006C 2325 nt3.45□□□□□ -1.86
TY1B-HO13535 SPR28YDR218C 1272 nt3.45□□□□□ -1.86
TY1B-HO13535 POL12YBL035C 2118 nt3.44□□□□□ -1.86
TY1B-HO13535 APP1YNL094W 1764 nt3.44□□□□□ -1.86
TY1B-HO13535 GCN4YEL009C 846 nt3.44□□□□□ -1.86
TY1B-HO13535 SPT2YER161C 1002 nt3.44□□□□□ -1.86
TY1B-HO13535 YGL024WYGL024W 336 nt3.44□□□□□ -1.86
TY1B-HO13535 GAL80YML051W 1308 nt3.44□□□□□ -1.86
TY1B-HO13535 PEP7YDR323C 1548 nt3.44□□□□□ -1.86
TY1B-HO13535 SIN4YNL236W 2925 nt3.43□□□□□ -1.86
TY1B-HO13535 STE12YHR084W 2067 nt3.43□□□□□ -1.86
TY1B-HO13535 YNL013CYNL013C 378 nt3.43□□□□□ -1.86
TY1B-HO13535 RNA14YMR061W 2034 nt3.43□□□□□ -1.86
TY1B-HO13535 IXR1YKL032C 1794 nt3.43□□□□□ -1.86
TY1B-HO13535 YIL025CYIL025C 375 nt3.43□□□□□ -1.86
TY1B-HO13535 DLS1YJL065C 504 nt3.43□□□□□ -1.86
TY1B-HO13535 BAR1YIL015W 1764 nt3.43□□□□□ -1.86
TY1B-HO13535 PMT4YJR143C 2289 nt3.42□□□□□ -1.86
TY1B-HO13535 SSD1YDR293C 3753 nt3.42□□□□□ -1.86
TY1B-HO13535 TEL1YBL088C 8364 nt3.42□□□□□ -1.86
TY1B-HO13535 PRP11YDL043C 801 nt3.42□□□□□ -1.86
TY1B-HO13535 SIP18YMR175W 240 nt3.42□□□□□ -1.86
TY1B-HO13535 RRP12YPL012W 3687 nt3.42□□□□□ -1.86
TY1B-HO13535 YBR209WYBR209W 318 nt3.42□□□□□ -1.86
TY1B-HO13535 INO4YOL108C 456 nt3.41□□□□□ -1.86
TY1B-HO13535 SRB8YCR081W 4284 nt3.41□□□□□ -1.86
TY1B-HO13535 SPO73YER046W 432 nt3.4□□□□□ -1.86
TY1B-HO13535 VFA1YER128W 612 nt3.4□□□□□ -1.86
TY1B-HO13535 SRT1YMR101C 1032 nt3.4□□□□□ -1.86
TY1B-HO13535 MSA1YOR066W 1890 nt3.4□□□□□ -1.87
TY1B-HO13535 RPC34YNR003C 954 nt3.4□□□□□ -1.87
TY1B-HO13535 YBR103C-AYBR103C-A 144 nt3.4□□□□□ -1.87
TY1B-HO13535 PDC2YDR081C 2778 nt3.4□□□□□ -1.87
TY1B-HO13535 NUP100YKL068W 2880 nt3.39□□□□□ -1.87
TY1B-HO13535 YCR064CYCR064C 411 nt3.39□□□□□ -1.87
TY1B-HO13535 AIM22YJL046W 1230 nt3.39□□□□□ -1.87
TY1B-HO13535 SCD6YPR129W 1050 nt3.39□□□□□ -1.87
TY1B-HO13535 CBP1YJL209W 1965 nt3.39□□□□□ -1.87
TY1B-HO13535 PEX6YNL329C 3093 nt3.39□□□□□ -1.87
TY1B-HO13535 DIT1YDR403W 1611 nt3.39□□□□□ -1.87
TY1B-HO13535 BCH2YKR027W 2298 nt3.39□□□□□ -1.87
TY1B-HO13535 FRE4YNR060W 2160 nt3.39□□□□□ -1.87
TY1B-HO13535 RAD7YJR052W 1698 nt3.38□□□□□ -1.87
TY1B-HO13535 USE1YGL098W 738 nt3.38□□□□□ -1.87
TY1B-HO13535 MRM1YOR201C 1239 nt3.38□□□□□ -1.87
TY1B-HO13535 YJR098CYJR098C 1971 nt3.38□□□□□ -1.87
TY1B-HO13535 YOR034C-AYOR034C-A 243 nt3.38□□□□□ -1.87
TY1B-HO13535 TAF3YPL011C 1062 nt3.38□□□□□ -1.87
TY1B-HO13535 CST9YLR394W 1449 nt3.37□□□□□ -1.87
TY1B-HO13535 IRC8YJL051W 2469 nt3.37□□□□□ -1.87
TY1B-HO13535 ENT1YDL161W 1365 nt3.37□□□□□ -1.87
TY1B-HO13535 DIS3YOL021C 3006 nt3.37□□□□□ -1.87
TY1B-HO13535 SPI1YER150W 447 nt3.37□□□□□ -1.87
TY1B-HO13535 SSK2YNR031C 4740 nt3.36□□□□□ -1.87
TY1B-HO13535 ECO1YFR027W 846 nt3.36□□□□□ -1.87
TY1B-HO13535 RPC17YJL011C 486 nt3.36□□□□□ -1.87
TY1B-HO13535 CIN1YOR349W 3045 nt3.36□□□□□ -1.87
TY1B-HO13535 FAR1YJL157C 2493 nt3.36□□□□□ -1.87
TY1B-HO13535 GEP4YHR100C 558 nt3.35□□□□□ -1.87
TY1B-HO13535 PEX8YGR077C 1770 nt3.35□□□□□ -1.87
TY1B-HO13535 VPS13YLL040C 9435 nt3.35□□□□□ -1.87
TY1B-HO13535 SPO14YKR031C 5052 nt3.35□□□□□ -1.87
TY1B-HO13535 SEG1YMR086W 2883 nt3.34□□□□□ -1.87
TY1B-HO13535 LDB17YDL146W 1476 nt3.34□□□□□ -1.87
TY1B-HO13535 SLX8YER116C 825 nt3.34□□□□□ -1.87
TY1B-HO13535 ADK2YER170W 678 nt3.34□□□□□ -1.87
TY1B-HO13535 FAF1YIL019W 1041 nt3.34□□□□□ -1.87
TY1B-HO13535 MET14YKL001C 609 nt3.34□□□□□ -1.87
TY1B-HO13535 YAL059C-AYAL059C-A 423 nt3.34□□□□□ -1.87
TY1B-HO13535 ATG17YLR423C 1254 nt3.34□□□□□ -1.87
TY1B-HO13535 GAB1YLR459W 1185 nt3.34□□□□□ -1.87
TY1B-HO13535 snR17asnR17a 333 nt3.34□□□□□ -1.87
TY1B-HO13535 SVL3YPL032C 2478 nt3.34□□□□□ -1.88
TY1B-HO13535 SIR4YDR227W 4077 nt3.34□□□□□ -1.88
TY1B-HO13535 NEO1YIL048W 3456 nt3.33□□□□□ -1.88
TY1B-HO13535 REV3YPL167C 4515 nt3.33□□□□□ -1.88
TY1B-HO13535 PPT2YPL148C 522 nt3.33□□□□□ -1.88
TY1B-HO13535 DUG2YBR281C 2637 nt3.33□□□□□ -1.88
TY1B-HO13535 MNR2YKL064W 2910 nt3.33□□□□□ -1.88
TY1B-HO13535 TRI1YMR233W 681 nt3.33□□□□□ -1.88
TY1B-HO13535 YGL132WYGL132W 336 nt3.32□□□□□ -1.88
TY1B-HO13535 RPL27AYHR010W 411 nt3.32□□□□□ -1.88
TY1B-HO13535 NUP159YIL115C 4383 nt3.32□□□□□ -1.88
TY1B-HO13535 SRP68YPL243W 1800 nt3.32□□□□□ -1.88
TY1B-HO13535 BNR1YIL159W 4128 nt3.32□□□□□ -1.88
Retrieved 100 of 7,029 protein–RNA pairs in 38.6 ms