RNA–Protein interactions for RNA: YOL080C

REX4, Transcript of Putative RNA exonuclease, yeastyeast

Gene REX4, Length 870 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
REX4YOL080C MTC1P47018 478 aaKnown RBP15.38■□□□□ 0.05
REX4YOL080C DRS1P32892 752 aaKnown RBP15.09■□□□□ 0.01
REX4YOL080C FAP1P53971 965 aa13.11□□□□□ -0.31
REX4YOL080C DIP2Q12220 943 aaPredicted RBP12.97□□□□□ -0.33
REX4YOL080C BFR2Q06631 534 aaKnown RBP12.87□□□□□ -0.35
REX4YOL080C AVT3P36062 692 aa12.68□□□□□ -0.38
REX4YOL080C ISW2Q08773 1120 aa12.59□□□□□ -0.39
REX4YOL080C PRI1P10363 409 aa12.58□□□□□ -0.4
REX4YOL080C RPG1P38249 964 aaKnown RBP12.48□□□□□ -0.41
REX4YOL080C AAD16Q02895 342 aa12.42□□□□□ -0.42
REX4YOL080C RSE1Q04693 1361 aaKnown RBP12.33□□□□□ -0.44
REX4YOL080C PRY3P47033 881 aa12.29□□□□□ -0.44
REX4YOL080C TSR3Q12094 313 aaKnown RBP11.98□□□□□ -0.49
REX4YOL080C RPL17AP05740 184 aaKnown RBP11.93□□□□□ -0.5
REX4YOL080C RPL17BP46990 184 aaKnown RBP11.93□□□□□ -0.5
REX4YOL080C TFA1P36100 482 aa11.81□□□□□ -0.52
REX4YOL080C REB1P21538 810 aa11.8□□□□□ -0.52
REX4YOL080C YCK3P39962 524 aa11.63□□□□□ -0.55
REX4YOL080C HAA1Q12753 694 aaKnown RBP11.51□□□□□ -0.57
REX4YOL080C MRPL32P25348 183 aa11.46□□□□□ -0.57
REX4YOL080C SPT21P35209 758 aa11.43□□□□□ -0.58
REX4YOL080C RIM101P33400 625 aa11.18□□□□□ -0.62
REX4YOL080C YKR023WP36119 530 aaKnown RBP11.17□□□□□ -0.62
REX4YOL080C CDC27P38042 758 aa11.05□□□□□ -0.64
REX4YOL080C HOP09932 586 aa10.97□□□□□ -0.65
REX4YOL080C TFC8Q12308 588 aa10.93□□□□□ -0.66
REX4YOL080C DCD1P06773 312 aa10.92□□□□□ -0.66
REX4YOL080C OXP1P28273 1286 aa10.86□□□□□ -0.67
REX4YOL080C YGL015CP33199 130 aa10.78□□□□□ -0.68
REX4YOL080C YIL055CP40523 627 aaKnown RBP10.69□□□□□ -0.7
REX4YOL080C YAH1Q12184 172 aaKnown RBP10.67□□□□□ -0.7
REX4YOL080C PTP3P40048 928 aa10.66□□□□□ -0.7
REX4YOL080C MAP2P38174 421 aaKnown RBP10.62□□□□□ -0.71
REX4YOL080C BCH2P36122 765 aa10.61□□□□□ -0.71
REX4YOL080C UBP10P53874 792 aaPredicted RBP10.57□□□□□ -0.72
REX4YOL080C SCY1P53009 804 aa10.53□□□□□ -0.72
REX4YOL080C RSM7P47150 247 aa10.52□□□□□ -0.73
REX4YOL080C SSP1P38871 571 aa10.51□□□□□ -0.73
REX4YOL080C YLR271WQ06152 274 aa10.48□□□□□ -0.73
REX4YOL080C EPS1P40557 701 aa10.4□□□□□ -0.74
REX4YOL080C AI2P03876 854 aa10.38□□□□□ -0.75
REX4YOL080C ARP8Q12386 881 aaKnown RBP RIP-Chip data10.37□□□□□ -0.75not detected
REX4YOL080C BDF1P35817 686 aa10.33□□□□□ -0.76
REX4YOL080C SLX5P32828 619 aaKnown RBP10.32□□□□□ -0.76
REX4YOL080C BBC1P47068 1157 aa10.32□□□□□ -0.76
REX4YOL080C PSD2P53037 1138 aaKnown RBP10.23□□□□□ -0.77
REX4YOL080C MGA2P40578 1113 aa10.17□□□□□ -0.78
REX4YOL080C CST9Q06032 482 aa10.16□□□□□ -0.78
REX4YOL080C TIF4632P39936 914 aaKnown RBP10.15□□□□□ -0.78
REX4YOL080C TGL3P40308 642 aa10.08□□□□□ -0.8
REX4YOL080C MRM1P25270 412 aa10.05□□□□□ -0.8
REX4YOL080C RCR1P38212 213 aa9.87□□□□□ -0.83
REX4YOL080C RTG3P38165 486 aa9.85□□□□□ -0.83
REX4YOL080C NSR1P27476 414 aaKnown RBP RIP-Chip data9.82□□□□□ -0.84not detected
REX4YOL080C VPS29P38759 282 aa9.8□□□□□ -0.84
REX4YOL080C YAP5P40574 245 aa9.8□□□□□ -0.84
REX4YOL080C YOR238WQ08634 303 aa9.77□□□□□ -0.85
REX4YOL080C PIB1Q06651 286 aa9.74□□□□□ -0.85
REX4YOL080C MST1P07236 462 aa9.72□□□□□ -0.85
REX4YOL080C RAM2P29703 316 aa9.72□□□□□ -0.85
REX4YOL080C YMR1P47147 688 aaKnown RBP RIP-Chip data9.72□□□□□ -0.85not detected
REX4YOL080C YFR006WP43590 535 aa9.7□□□□□ -0.86
REX4YOL080C DBP1P24784 617 aaKnown RBP9.69□□□□□ -0.86
REX4YOL080C STS1P38637 319 aa9.69□□□□□ -0.86
REX4YOL080C DMA1P38823 416 aa9.62□□□□□ -0.87
REX4YOL080C MAK11P20484 414 aaKnown RBP9.57□□□□□ -0.88
REX4YOL080C GTT3P39996 337 aa9.57□□□□□ -0.88
REX4YOL080C BUD31P25337 157 aaPredicted RBP9.56□□□□□ -0.88
REX4YOL080C UBP9P39967 754 aa9.56□□□□□ -0.88
REX4YOL080C VMA1P17255 1071 aaKnown RBP9.52□□□□□ -0.89
REX4YOL080C WSC3Q12215 556 aa9.52□□□□□ -0.89
REX4YOL080C YBL029C-AQ3E756 94 aa9.52□□□□□ -0.89
REX4YOL080C RQC2Q12532 1038 aaKnown RBP9.5□□□□□ -0.89
REX4YOL080C MIF2P35201 549 aa9.48□□□□□ -0.89
REX4YOL080C COQ8P27697 501 aa9.47□□□□□ -0.89
REX4YOL080C EDS1P38073 919 aa9.44□□□□□ -0.9
REX4YOL080C VNX1P42839 908 aa9.43□□□□□ -0.9
REX4YOL080C SET1P38827 1080 aaKnown RBP9.41□□□□□ -0.9
REX4YOL080C YOL036WQ08206 761 aa9.4□□□□□ -0.9
REX4YOL080C SAM3Q08986 587 aa9.4□□□□□ -0.9
REX4YOL080C SET4P42948 560 aa9.39□□□□□ -0.91
REX4YOL080C PTC3P34221 468 aaKnown RBP9.37□□□□□ -0.91
REX4YOL080C SPP1Q03012 353 aa9.36□□□□□ -0.91
REX4YOL080C MSB4Q12317 492 aa9.33□□□□□ -0.92
REX4YOL080C GYP5Q12344 894 aa9.33□□□□□ -0.92
REX4YOL080C TIF11P38912 153 aaKnown RBP9.32□□□□□ -0.92
REX4YOL080C GRE2Q12068 342 aaKnown RBP9.3□□□□□ -0.92
REX4YOL080C ULI1P43604 169 aa9.28□□□□□ -0.92
REX4YOL080C NOP53Q12080 455 aaKnown RBP9.28□□□□□ -0.92
REX4YOL080C DCW1P36091 449 aa9.27□□□□□ -0.93
REX4YOL080C ATH1P48016 1211 aa9.27□□□□□ -0.93
REX4YOL080C EAP1P36041 632 aaKnown RBP9.25□□□□□ -0.93
REX4YOL080C TRP5P00931 707 aaKnown RBP9.24□□□□□ -0.93
REX4YOL080C GUT1P32190 709 aa9.23□□□□□ -0.93
REX4YOL080C IOC2Q12072 812 aa9.22□□□□□ -0.93
REX4YOL080C ABP1P15891 592 aaKnown RBP9.21□□□□□ -0.94
REX4YOL080C SIS1P25294 352 aaKnown RBP9.21□□□□□ -0.94
REX4YOL080C HTA1P04911 132 aaKnown RBP9.2□□□□□ -0.94
REX4YOL080C HTA2P04912 132 aa9.2□□□□□ -0.94
REX4YOL080C IFH1P39520 1085 aa9.18□□□□□ -0.94
Retrieved 100 of 5,963 RNA–protein pairs in 10.6 ms