RNA–Protein interactions for RNA: YJL011C

RPC17, Transcript of RNA polymerase III subunit C17, yeastyeast

Gene RPC17, Length 486 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPC17YJL011C MTC1P47018 478 aaKnown RBP13.99□□□□□ -0.17
RPC17YJL011C DRS1P32892 752 aaKnown RBP13.8□□□□□ -0.2
RPC17YJL011C FAP1P53971 965 aa12.73□□□□□ -0.37
RPC17YJL011C BFR2Q06631 534 aaKnown RBP12.02□□□□□ -0.49
RPC17YJL011C PRY3P47033 881 aa11.95□□□□□ -0.5
RPC17YJL011C PRI1P10363 409 aa11.85□□□□□ -0.51
RPC17YJL011C AAD16Q02895 342 aa11.8□□□□□ -0.52
RPC17YJL011C DIP2Q12220 943 aaPredicted RBP11.67□□□□□ -0.54
RPC17YJL011C ISW2Q08773 1120 aa11.62□□□□□ -0.55
RPC17YJL011C AVT3P36062 692 aa11.61□□□□□ -0.55
RPC17YJL011C RPG1P38249 964 aaKnown RBP11.5□□□□□ -0.57
RPC17YJL011C TFA1P36100 482 aa11.45□□□□□ -0.58
RPC17YJL011C YCK3P39962 524 aa11.28□□□□□ -0.6
RPC17YJL011C HAA1Q12753 694 aaKnown RBP11.21□□□□□ -0.61
RPC17YJL011C TSR3Q12094 313 aaKnown RBP11.2□□□□□ -0.62
RPC17YJL011C RSE1Q04693 1361 aaKnown RBP11.04□□□□□ -0.64
RPC17YJL011C MRPL32P25348 183 aa10.77□□□□□ -0.69
RPC17YJL011C RPL17AP05740 184 aaKnown RBP10.7□□□□□ -0.7
RPC17YJL011C RPL17BP46990 184 aaKnown RBP10.7□□□□□ -0.7
RPC17YJL011C REB1P21538 810 aa10.66□□□□□ -0.7
RPC17YJL011C YGL015CP33199 130 aa10.36□□□□□ -0.75
RPC17YJL011C SPT21P35209 758 aa10.23□□□□□ -0.77
RPC17YJL011C CDC27P38042 758 aa10.2□□□□□ -0.78
RPC17YJL011C YKR023WP36119 530 aaKnown RBP10.14□□□□□ -0.79
RPC17YJL011C RIM101P33400 625 aa10.09□□□□□ -0.79
RPC17YJL011C TFC8Q12308 588 aa9.94□□□□□ -0.82
RPC17YJL011C HOP09932 586 aa9.93□□□□□ -0.82
RPC17YJL011C UBP10P53874 792 aaPredicted RBP9.93□□□□□ -0.82
RPC17YJL011C MAP2P38174 421 aaKnown RBP9.9□□□□□ -0.82
RPC17YJL011C DCD1P06773 312 aa9.89□□□□□ -0.83
RPC17YJL011C PTP3P40048 928 aa9.86□□□□□ -0.83
RPC17YJL011C OXP1P28273 1286 aa9.8□□□□□ -0.84
RPC17YJL011C RQC2Q12532 1038 aaKnown RBP9.79□□□□□ -0.84
RPC17YJL011C SSP1P38871 571 aa9.7□□□□□ -0.86
RPC17YJL011C SCY1P53009 804 aa9.67□□□□□ -0.86
RPC17YJL011C YAH1Q12184 172 aaKnown RBP9.66□□□□□ -0.86
RPC17YJL011C BCH2P36122 765 aa9.6□□□□□ -0.87
RPC17YJL011C YIL055CP40523 627 aaKnown RBP9.58□□□□□ -0.88
RPC17YJL011C SLX5P32828 619 aaKnown RBP9.57□□□□□ -0.88
RPC17YJL011C YLR271WQ06152 274 aa9.56□□□□□ -0.88
RPC17YJL011C BUD31P25337 157 aaPredicted RBP9.54□□□□□ -0.88
RPC17YJL011C TIF4632P39936 914 aaKnown RBP9.53□□□□□ -0.88
RPC17YJL011C ARP8Q12386 881 aaKnown RBP RIP-Chip data9.51□□□□□ -0.89not detected
RPC17YJL011C DMA1P38823 416 aa9.5□□□□□ -0.89
RPC17YJL011C TGL3P40308 642 aa9.48□□□□□ -0.89
RPC17YJL011C RSM7P47150 247 aa9.47□□□□□ -0.89
RPC17YJL011C EPS1P40557 701 aa9.36□□□□□ -0.91
RPC17YJL011C MGA2P40578 1113 aa9.34□□□□□ -0.91
RPC17YJL011C BDF1P35817 686 aa9.32□□□□□ -0.92
RPC17YJL011C AI2P03876 854 aa9.3□□□□□ -0.92
RPC17YJL011C PSD2P53037 1138 aaKnown RBP9.29□□□□□ -0.92
RPC17YJL011C CST9Q06032 482 aa9.29□□□□□ -0.92
RPC17YJL011C UBP9P39967 754 aa9.24□□□□□ -0.93
RPC17YJL011C BBC1P47068 1157 aa9.19□□□□□ -0.94
RPC17YJL011C SIS1P25294 352 aaKnown RBP9.08□□□□□ -0.96
RPC17YJL011C MST1P07236 462 aa9.07□□□□□ -0.96
RPC17YJL011C YOR238WQ08634 303 aa9.05□□□□□ -0.96
RPC17YJL011C MRM1P25270 412 aa9.04□□□□□ -0.96
RPC17YJL011C NSR1P27476 414 aaKnown RBP RIP-Chip data9.03□□□□□ -0.96 RIP-Chip
RPC17YJL011C RAM2P29703 316 aa8.98□□□□□ -0.97
RPC17YJL011C RCR1P38212 213 aa8.97□□□□□ -0.97
RPC17YJL011C YAP5P40574 245 aa8.96□□□□□ -0.98
RPC17YJL011C SAS10Q12136 610 aaPredicted RBP8.94□□□□□ -0.98
RPC17YJL011C YBL029C-AQ3E756 94 aa8.94□□□□□ -0.98
RPC17YJL011C RTG3P38165 486 aa8.89□□□□□ -0.99
RPC17YJL011C VNX1P42839 908 aa8.85□□□□□ -0.99
RPC17YJL011C VPS29P38759 282 aa8.82□□□□□ -1
RPC17YJL011C WSC3Q12215 556 aa8.8□□□□□ -1
RPC17YJL011C MAK11P20484 414 aaKnown RBP8.79□□□□□ -1
RPC17YJL011C SET1P38827 1080 aaKnown RBP8.78□□□□□ -1
RPC17YJL011C GTT3P39996 337 aa8.77□□□□□ -1.01
RPC17YJL011C SPP1Q03012 353 aa8.76□□□□□ -1.01
RPC17YJL011C PIB1Q06651 286 aa8.73□□□□□ -1.01
RPC17YJL011C YPR148CQ06523 435 aa8.72□□□□□ -1.01
RPC17YJL011C STS1P38637 319 aa8.71□□□□□ -1.02
RPC17YJL011C YMR1P47147 688 aaKnown RBP RIP-Chip data8.71□□□□□ -1.02not detected
RPC17YJL011C LEU3P08638 886 aa8.69□□□□□ -1.02
RPC17YJL011C TIF11P38912 153 aaKnown RBP8.69□□□□□ -1.02
RPC17YJL011C COQ8P27697 501 aa8.66□□□□□ -1.02
RPC17YJL011C YFR006WP43590 535 aa8.66□□□□□ -1.02
RPC17YJL011C DBP1P24784 617 aaKnown RBP8.65□□□□□ -1.02
RPC17YJL011C VPS70P47161 811 aa8.65□□□□□ -1.02
RPC17YJL011C LEO1P38439 464 aa8.64□□□□□ -1.03
RPC17YJL011C EDS1P38073 919 aa8.62□□□□□ -1.03
RPC17YJL011C IFH1P39520 1085 aa8.62□□□□□ -1.03
RPC17YJL011C MIF2P35201 549 aa8.59□□□□□ -1.03
RPC17YJL011C ULI1P43604 169 aa8.58□□□□□ -1.04
RPC17YJL011C FKH1P40466 484 aa8.57□□□□□ -1.04
RPC17YJL011C CKB1P43639 278 aa8.57□□□□□ -1.04
RPC17YJL011C AIR2Q12476 344 aaKnown RBP8.57□□□□□ -1.04
RPC17YJL011C MSB4Q12317 492 aa8.56□□□□□ -1.04
RPC17YJL011C IOC2Q12072 812 aa8.55□□□□□ -1.04
RPC17YJL011C LDB19Q12502 818 aa8.55□□□□□ -1.04
RPC17YJL011C NOP53Q12080 455 aaKnown RBP8.54□□□□□ -1.04
RPC17YJL011C YOL036WQ08206 761 aa8.52□□□□□ -1.05
RPC17YJL011C EAP1P36041 632 aaKnown RBP8.51□□□□□ -1.05
RPC17YJL011C SET4P42948 560 aa8.51□□□□□ -1.05
RPC17YJL011C VMA1P17255 1071 aaKnown RBP8.5□□□□□ -1.05
RPC17YJL011C SPB4P25808 606 aaPredicted RBP8.5□□□□□ -1.05
RPC17YJL011C PTC3P34221 468 aaKnown RBP8.5□□□□□ -1.05
Retrieved 100 of 5,963 RNA–protein pairs in 40.5 ms