RNA–Protein interactions for RNA: YNL329C

PEX6, Transcript of AAA-peroxin, yeastyeast

Gene PEX6, Length 3,093 nt, Biotype protein coding, Subcellular localisation Peroxisome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX6YNL329C DRS1P32892 752 aaKnown RBP9.27□□□□□ -0.93
PEX6YNL329C MTC1P47018 478 aaKnown RBP8.71□□□□□ -1.01
PEX6YNL329C BFR2Q06631 534 aaKnown RBP8.21□□□□□ -1.1
PEX6YNL329C TFA1P36100 482 aa7.84□□□□□ -1.15
PEX6YNL329C DIP2Q12220 943 aaPredicted RBP7.71□□□□□ -1.18
PEX6YNL329C AVT3P36062 692 aa7.6□□□□□ -1.19
PEX6YNL329C RQC2Q12532 1038 aaKnown RBP7.2□□□□□ -1.26
PEX6YNL329C RSE1Q04693 1361 aaKnown RBP7.17□□□□□ -1.26
PEX6YNL329C ISW2Q08773 1120 aa7.05□□□□□ -1.28
PEX6YNL329C RPG1P38249 964 aaKnown RBP6.97□□□□□ -1.29
PEX6YNL329C RPL17AP05740 184 aaKnown RBP6.92□□□□□ -1.3
PEX6YNL329C RPL17BP46990 184 aaKnown RBP6.92□□□□□ -1.3
PEX6YNL329C FAP1P53971 965 aa6.91□□□□□ -1.3
PEX6YNL329C REB1P21538 810 aa6.84□□□□□ -1.31
PEX6YNL329C PTP3P40048 928 aa6.8□□□□□ -1.32
PEX6YNL329C DMA1P38823 416 aa6.74□□□□□ -1.33
PEX6YNL329C PRI1P10363 409 aa6.73□□□□□ -1.33
PEX6YNL329C AAD16Q02895 342 aa6.63□□□□□ -1.35
PEX6YNL329C TSR3Q12094 313 aaKnown RBP6.56□□□□□ -1.36
PEX6YNL329C YAH1Q12184 172 aaKnown RBP6.53□□□□□ -1.36
PEX6YNL329C RIM101P33400 625 aa6.53□□□□□ -1.36
PEX6YNL329C SPT21P35209 758 aa6.52□□□□□ -1.37
PEX6YNL329C SSP1P38871 571 aa6.52□□□□□ -1.37
PEX6YNL329C YIL055CP40523 627 aaKnown RBP6.45□□□□□ -1.38
PEX6YNL329C ARP8Q12386 881 aaKnown RBP RIP-Chip data6.41□□□□□ -1.38not detected
PEX6YNL329C PRY3P47033 881 aa6.41□□□□□ -1.38
PEX6YNL329C OXP1P28273 1286 aa6.39□□□□□ -1.39
PEX6YNL329C TAF7Q05021 590 aa6.32□□□□□ -1.4
PEX6YNL329C YLR271WQ06152 274 aa6.29□□□□□ -1.4
PEX6YNL329C MRPL32P25348 183 aa6.29□□□□□ -1.4
PEX6YNL329C HOP09932 586 aa6.27□□□□□ -1.41
PEX6YNL329C YKR023WP36119 530 aaKnown RBP6.26□□□□□ -1.41
PEX6YNL329C RSM7P47150 247 aa6.24□□□□□ -1.41
PEX6YNL329C DCD1P06773 312 aa6.23□□□□□ -1.41
PEX6YNL329C MGA2P40578 1113 aa6.21□□□□□ -1.42
PEX6YNL329C LEO1P38439 464 aa6.18□□□□□ -1.42
PEX6YNL329C CST9Q06032 482 aa6.16□□□□□ -1.42
PEX6YNL329C TFC8Q12308 588 aa6.16□□□□□ -1.42
PEX6YNL329C AI2P03876 854 aa6.11□□□□□ -1.43
PEX6YNL329C CDC27P38042 758 aa6.08□□□□□ -1.44
PEX6YNL329C BBC1P47068 1157 aa6.08□□□□□ -1.44
PEX6YNL329C SAS10Q12136 610 aaPredicted RBP6.03□□□□□ -1.44
PEX6YNL329C PSD2P53037 1138 aaKnown RBP6.03□□□□□ -1.44
PEX6YNL329C BCH2P36122 765 aa6.02□□□□□ -1.45
PEX6YNL329C LEU3P08638 886 aa6.02□□□□□ -1.45
PEX6YNL329C SPB4P25808 606 aaPredicted RBP5.99□□□□□ -1.45
PEX6YNL329C MRM1P25270 412 aa5.99□□□□□ -1.45
PEX6YNL329C EPS1P40557 701 aa5.95□□□□□ -1.46
PEX6YNL329C SET1P38827 1080 aaKnown RBP5.95□□□□□ -1.46
PEX6YNL329C VPS70P47161 811 aa5.95□□□□□ -1.46
PEX6YNL329C RAM2P29703 316 aa5.94□□□□□ -1.46
PEX6YNL329C HAA1Q12753 694 aaKnown RBP5.94□□□□□ -1.46
PEX6YNL329C RCR1P38212 213 aa5.91□□□□□ -1.46
PEX6YNL329C SCY1P53009 804 aa5.91□□□□□ -1.46
PEX6YNL329C RPN1P38764 993 aaKnown RBP5.9□□□□□ -1.47
PEX6YNL329C BDF1P35817 686 aa5.89□□□□□ -1.47
PEX6YNL329C DMA2P53924 522 aa5.88□□□□□ -1.47
PEX6YNL329C RTG3P38165 486 aa5.88□□□□□ -1.47
PEX6YNL329C CKB1P43639 278 aa5.85□□□□□ -1.47
PEX6YNL329C YCK3P39962 524 aa5.83□□□□□ -1.48
PEX6YNL329C IFH1P39520 1085 aa5.82□□□□□ -1.48
PEX6YNL329C MAP2P38174 421 aaKnown RBP5.8□□□□□ -1.48
PEX6YNL329C MIF2P35201 549 aa5.79□□□□□ -1.48
PEX6YNL329C MAK11P20484 414 aaKnown RBP5.79□□□□□ -1.48
PEX6YNL329C PBS2P08018 668 aa5.76□□□□□ -1.49
PEX6YNL329C COQ8P27697 501 aa5.76□□□□□ -1.49
PEX6YNL329C YPR148CQ06523 435 aa5.75□□□□□ -1.49
PEX6YNL329C SLX5P32828 619 aaKnown RBP5.75□□□□□ -1.49
PEX6YNL329C YFR006WP43590 535 aa5.74□□□□□ -1.49
PEX6YNL329C VPS29P38759 282 aa5.72□□□□□ -1.49
PEX6YNL329C UBP10P53874 792 aaPredicted RBP5.71□□□□□ -1.49
PEX6YNL329C DBP1P24784 617 aaKnown RBP5.69□□□□□ -1.5
PEX6YNL329C GLC3P32775 704 aa5.69□□□□□ -1.5
PEX6YNL329C MAM3Q12296 706 aa5.69□□□□□ -1.5
PEX6YNL329C KIN1P13185 1064 aa5.68□□□□□ -1.5
PEX6YNL329C DSF2P38213 736 aa5.68□□□□□ -1.5
PEX6YNL329C YMR1P47147 688 aaKnown RBP RIP-Chip data5.68□□□□□ -1.5not detected
PEX6YNL329C YGL015CP33199 130 aa5.68□□□□□ -1.5
PEX6YNL329C IES2P40154 320 aa5.68□□□□□ -1.5
PEX6YNL329C PIB1Q06651 286 aa5.68□□□□□ -1.5
PEX6YNL329C REF2P42073 533 aaPredicted RBP5.66□□□□□ -1.5
PEX6YNL329C STS1P38637 319 aa5.66□□□□□ -1.5
PEX6YNL329C YOR238WQ08634 303 aa5.65□□□□□ -1.5
PEX6YNL329C EDS1P38073 919 aa5.64□□□□□ -1.51
PEX6YNL329C ATF2P53296 535 aa5.64□□□□□ -1.51
PEX6YNL329C YNR021WP53723 404 aaKnown RBP5.64□□□□□ -1.51
PEX6YNL329C HGH1P48362 394 aaKnown RBP5.63□□□□□ -1.51
PEX6YNL329C RLF2Q12495 606 aa5.63□□□□□ -1.51
PEX6YNL329C DIT2P21595 489 aa5.61□□□□□ -1.51
PEX6YNL329C PTC3P34221 468 aaKnown RBP5.59□□□□□ -1.51
PEX6YNL329C VHR2P40041 505 aa5.58□□□□□ -1.52
PEX6YNL329C TIF4632P39936 914 aaKnown RBP5.57□□□□□ -1.52
PEX6YNL329C NOP53Q12080 455 aaKnown RBP5.57□□□□□ -1.52
PEX6YNL329C ATH1P48016 1211 aa5.56□□□□□ -1.52
PEX6YNL329C ABP1P15891 592 aaKnown RBP5.56□□□□□ -1.52
PEX6YNL329C KIC1P38692 1080 aa5.56□□□□□ -1.52
PEX6YNL329C GUA1P38625 525 aaKnown RBP5.55□□□□□ -1.52
PEX6YNL329C NUP42P49686 430 aaKnown RBP5.55□□□□□ -1.52
PEX6YNL329C AIM7Q12156 149 aa5.55□□□□□ -1.52
PEX6YNL329C MAK21Q12176 1025 aaKnown RBP5.54□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms