Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SMOQ99835 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SMOQ99835 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC22.63■■□□□ 1.21
SMOQ99835 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC22.63■■□□□ 1.21
SMOQ99835 AP004607.4-201ENST00000530158 1459 ntBASIC22.63■■□□□ 1.21
SMOQ99835 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
SMOQ99835 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC22.63■■□□□ 1.21
SMOQ99835 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC22.63■■□□□ 1.21
SMOQ99835 AC079140.4-201ENST00000507448 529 ntBASIC22.63■■□□□ 1.21
SMOQ99835 AC104564.3-201ENST00000582367 638 ntBASIC22.63■■□□□ 1.21
SMOQ99835 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SMOQ99835 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC22.63■■□□□ 1.21
SMOQ99835 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
SMOQ99835 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
SMOQ99835 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SMOQ99835 GUSBP5-202ENST00000510805 1989 ntBASIC22.63■■□□□ 1.21
SMOQ99835 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SMOQ99835 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC22.63■■□□□ 1.21
SMOQ99835 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC22.62■■□□□ 1.21
SMOQ99835 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
SMOQ99835 AP006587.3-201ENST00000525742 1516 ntBASIC22.62■■□□□ 1.21
SMOQ99835 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC22.62■■□□□ 1.21
SMOQ99835 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SMOQ99835 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC22.62■■□□□ 1.21
SMOQ99835 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
SMOQ99835 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC22.62■■□□□ 1.21
SMOQ99835 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SMOQ99835 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SMOQ99835 COX20-201ENST00000366528 568 ntTSL 2 BASIC22.62■■□□□ 1.21
SMOQ99835 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC22.62■■□□□ 1.21
SMOQ99835 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC22.62■■□□□ 1.21
SMOQ99835 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
SMOQ99835 AC004854.2-201ENST00000608450 1441 ntBASIC22.62■■□□□ 1.21
SMOQ99835 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SMOQ99835 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SMOQ99835 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
SMOQ99835 AC092053.2-201ENST00000640557 1818 ntBASIC22.61■■□□□ 1.21
SMOQ99835 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SMOQ99835 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SMOQ99835 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SMOQ99835 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SMOQ99835 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SMOQ99835 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
SMOQ99835 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC22.61■■□□□ 1.21
SMOQ99835 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
SMOQ99835 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC22.61■■□□□ 1.21
SMOQ99835 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC22.61■■□□□ 1.21
SMOQ99835 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC22.61■■□□□ 1.21
SMOQ99835 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
SMOQ99835 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC22.61■■□□□ 1.21
SMOQ99835 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SMOQ99835 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC22.61■■□□□ 1.21
SMOQ99835 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SMOQ99835 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SMOQ99835 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC22.6■■□□□ 1.21
SMOQ99835 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC22.6■■□□□ 1.21
SMOQ99835 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC22.6■■□□□ 1.21
SMOQ99835 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC22.6■■□□□ 1.21
SMOQ99835 AC092666.2-201ENST00000613287 246 ntBASIC22.6■■□□□ 1.21
SMOQ99835 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SMOQ99835 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SMOQ99835 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
SMOQ99835 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC22.6■■□□□ 1.21
SMOQ99835 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
SMOQ99835 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC22.59■■□□□ 1.21
SMOQ99835 AC242852.2-201ENST00000615738 1807 ntBASIC22.59■■□□□ 1.21
SMOQ99835 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SMOQ99835 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC22.59■■□□□ 1.21
SMOQ99835 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SMOQ99835 AC022517.1-201ENST00000592429 346 ntBASIC22.59■■□□□ 1.21
SMOQ99835 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SMOQ99835 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SMOQ99835 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
SMOQ99835 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC22.58■■□□□ 1.21
SMOQ99835 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC22.58■■□□□ 1.21
SMOQ99835 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SMOQ99835 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC22.58■■□□□ 1.21
SMOQ99835 GALNS-213ENST00000569433 723 ntTSL 3 BASIC22.58■■□□□ 1.21
SMOQ99835 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC22.58■■□□□ 1.21
SMOQ99835 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.2
SMOQ99835 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.2
SMOQ99835 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
SMOQ99835 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
SMOQ99835 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SMOQ99835 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SMOQ99835 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SMOQ99835 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SMOQ99835 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SMOQ99835 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC22.57■■□□□ 1.2
SMOQ99835 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SMOQ99835 GLI3-203ENST00000437480 451 ntTSL 2 BASIC22.57■■□□□ 1.2
SMOQ99835 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC22.57■■□□□ 1.2
SMOQ99835 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC22.57■■□□□ 1.2
SMOQ99835 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SMOQ99835 AC012676.1-201ENST00000574705 1949 ntBASIC22.57■■□□□ 1.2
SMOQ99835 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SMOQ99835 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
SMOQ99835 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SMOQ99835 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC22.56■■□□□ 1.2
SMOQ99835 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms