Protein–RNA interactions for Protein: A0A0A0MS06

TRBV23-1, T-cell receptor beta variable 23-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23-1A0A0A0MS06 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
TRBV23-1A0A0A0MS06 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
TRBV23-1A0A0A0MS06 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.04■□□□□ 0.48
TRBV23-1A0A0A0MS06 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
TRBV23-1A0A0A0MS06 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
TRBV23-1A0A0A0MS06 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.04■□□□□ 0.48
TRBV23-1A0A0A0MS06 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.04■□□□□ 0.48
TRBV23-1A0A0A0MS06 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
TRBV23-1A0A0A0MS06 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.04■□□□□ 0.48
TRBV23-1A0A0A0MS06 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV23-1A0A0A0MS06 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
TRBV23-1A0A0A0MS06 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
TRBV23-1A0A0A0MS06 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.04■□□□□ 0.48
TRBV23-1A0A0A0MS06 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
TRBV23-1A0A0A0MS06 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV23-1A0A0A0MS06 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV23-1A0A0A0MS06 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
TRBV23-1A0A0A0MS06 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.03■□□□□ 0.48
TRBV23-1A0A0A0MS06 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRBV23-1A0A0A0MS06 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.03■□□□□ 0.48
TRBV23-1A0A0A0MS06 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRBV23-1A0A0A0MS06 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
TRBV23-1A0A0A0MS06 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.03■□□□□ 0.48
TRBV23-1A0A0A0MS06 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.03■□□□□ 0.48
TRBV23-1A0A0A0MS06 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.03■□□□□ 0.48
TRBV23-1A0A0A0MS06 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.03■□□□□ 0.48
TRBV23-1A0A0A0MS06 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.03■□□□□ 0.48
TRBV23-1A0A0A0MS06 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRBV23-1A0A0A0MS06 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC18.03■□□□□ 0.48
TRBV23-1A0A0A0MS06 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRBV23-1A0A0A0MS06 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
TRBV23-1A0A0A0MS06 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRBV23-1A0A0A0MS06 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRBV23-1A0A0A0MS06 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
TRBV23-1A0A0A0MS06 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRBV23-1A0A0A0MS06 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TRBV23-1A0A0A0MS06 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.02■□□□□ 0.48
TRBV23-1A0A0A0MS06 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.02■□□□□ 0.48
TRBV23-1A0A0A0MS06 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRBV23-1A0A0A0MS06 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
TRBV23-1A0A0A0MS06 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRBV23-1A0A0A0MS06 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.01■□□□□ 0.47
TRBV23-1A0A0A0MS06 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.01■□□□□ 0.47
TRBV23-1A0A0A0MS06 TSPY26P-201ENST00000476365 1326 ntBASIC18.01■□□□□ 0.47
TRBV23-1A0A0A0MS06 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.01■□□□□ 0.47
TRBV23-1A0A0A0MS06 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRBV23-1A0A0A0MS06 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.01■□□□□ 0.47
TRBV23-1A0A0A0MS06 PKD1P6-201ENST00000343738 4769 ntBASIC18.01■□□□□ 0.47
TRBV23-1A0A0A0MS06 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRBV23-1A0A0A0MS06 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRBV23-1A0A0A0MS06 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.01■□□□□ 0.47
TRBV23-1A0A0A0MS06 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRBV23-1A0A0A0MS06 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRBV23-1A0A0A0MS06 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
TRBV23-1A0A0A0MS06 OXCT2P1-201ENST00000447263 1535 ntBASIC18.01■□□□□ 0.47
TRBV23-1A0A0A0MS06 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
TRBV23-1A0A0A0MS06 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.01■□□□□ 0.47
TRBV23-1A0A0A0MS06 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRBV23-1A0A0A0MS06 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRBV23-1A0A0A0MS06 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
TRBV23-1A0A0A0MS06 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18■□□□□ 0.47
TRBV23-1A0A0A0MS06 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18■□□□□ 0.47
TRBV23-1A0A0A0MS06 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRBV23-1A0A0A0MS06 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18■□□□□ 0.47
TRBV23-1A0A0A0MS06 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18■□□□□ 0.47
TRBV23-1A0A0A0MS06 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18■□□□□ 0.47
TRBV23-1A0A0A0MS06 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
TRBV23-1A0A0A0MS06 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18■□□□□ 0.47
TRBV23-1A0A0A0MS06 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18■□□□□ 0.47
TRBV23-1A0A0A0MS06 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18■□□□□ 0.47
TRBV23-1A0A0A0MS06 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRBV23-1A0A0A0MS06 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
TRBV23-1A0A0A0MS06 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRBV23-1A0A0A0MS06 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
TRBV23-1A0A0A0MS06 AC087742.1-201ENST00000575880 1738 ntBASIC18■□□□□ 0.47
TRBV23-1A0A0A0MS06 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRBV23-1A0A0A0MS06 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
TRBV23-1A0A0A0MS06 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRBV23-1A0A0A0MS06 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.99■□□□□ 0.47
TRBV23-1A0A0A0MS06 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
TRBV23-1A0A0A0MS06 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRBV23-1A0A0A0MS06 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC17.99■□□□□ 0.47
TRBV23-1A0A0A0MS06 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRBV23-1A0A0A0MS06 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRBV23-1A0A0A0MS06 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRBV23-1A0A0A0MS06 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRBV23-1A0A0A0MS06 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRBV23-1A0A0A0MS06 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
TRBV23-1A0A0A0MS06 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRBV23-1A0A0A0MS06 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRBV23-1A0A0A0MS06 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRBV23-1A0A0A0MS06 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRBV23-1A0A0A0MS06 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
TRBV23-1A0A0A0MS06 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRBV23-1A0A0A0MS06 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV23-1A0A0A0MS06 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV23-1A0A0A0MS06 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV23-1A0A0A0MS06 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17.98■□□□□ 0.47
TRBV23-1A0A0A0MS06 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV23-1A0A0A0MS06 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms