Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
VCX3BQ9H321 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
VCX3BQ9H321 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
VCX3BQ9H321 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
VCX3BQ9H321 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
VCX3BQ9H321 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
VCX3BQ9H321 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
VCX3BQ9H321 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
VCX3BQ9H321 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
VCX3BQ9H321 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.47■□□□□ 0.87
VCX3BQ9H321 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
VCX3BQ9H321 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
VCX3BQ9H321 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
VCX3BQ9H321 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
VCX3BQ9H321 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
VCX3BQ9H321 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
VCX3BQ9H321 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
VCX3BQ9H321 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
VCX3BQ9H321 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.47■□□□□ 0.87
VCX3BQ9H321 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
VCX3BQ9H321 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.46■□□□□ 0.87
VCX3BQ9H321 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
VCX3BQ9H321 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
VCX3BQ9H321 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
VCX3BQ9H321 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.46■□□□□ 0.87
VCX3BQ9H321 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
VCX3BQ9H321 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
VCX3BQ9H321 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.87
VCX3BQ9H321 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
VCX3BQ9H321 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
VCX3BQ9H321 FEM1AP1-201ENST00000431297 1995 ntBASIC20.45■□□□□ 0.86
VCX3BQ9H321 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VCX3BQ9H321 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VCX3BQ9H321 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.45■□□□□ 0.86
VCX3BQ9H321 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.45■□□□□ 0.86
VCX3BQ9H321 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
VCX3BQ9H321 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VCX3BQ9H321 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VCX3BQ9H321 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
VCX3BQ9H321 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
VCX3BQ9H321 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
VCX3BQ9H321 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
VCX3BQ9H321 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.44■□□□□ 0.86
VCX3BQ9H321 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
VCX3BQ9H321 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
VCX3BQ9H321 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
VCX3BQ9H321 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VCX3BQ9H321 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.44■□□□□ 0.86
VCX3BQ9H321 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.44■□□□□ 0.86
VCX3BQ9H321 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.44■□□□□ 0.86
VCX3BQ9H321 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
VCX3BQ9H321 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
VCX3BQ9H321 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
VCX3BQ9H321 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
VCX3BQ9H321 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
VCX3BQ9H321 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
VCX3BQ9H321 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
VCX3BQ9H321 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.43■□□□□ 0.86
VCX3BQ9H321 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
VCX3BQ9H321 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
VCX3BQ9H321 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
VCX3BQ9H321 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.43■□□□□ 0.86
VCX3BQ9H321 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
VCX3BQ9H321 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
VCX3BQ9H321 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
VCX3BQ9H321 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
VCX3BQ9H321 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
VCX3BQ9H321 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
VCX3BQ9H321 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC20.42■□□□□ 0.86
VCX3BQ9H321 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
VCX3BQ9H321 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VCX3BQ9H321 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
VCX3BQ9H321 AC060814.1-201ENST00000554326 538 ntBASIC20.42■□□□□ 0.86
VCX3BQ9H321 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.42■□□□□ 0.86
VCX3BQ9H321 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.42■□□□□ 0.86
VCX3BQ9H321 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
VCX3BQ9H321 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.42■□□□□ 0.86
VCX3BQ9H321 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VCX3BQ9H321 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
VCX3BQ9H321 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.42■□□□□ 0.86
VCX3BQ9H321 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
VCX3BQ9H321 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.41■□□□□ 0.86
VCX3BQ9H321 LINC01960-201ENST00000563759 1884 ntBASIC20.41■□□□□ 0.86
VCX3BQ9H321 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.41■□□□□ 0.86
VCX3BQ9H321 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
VCX3BQ9H321 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.41■□□□□ 0.86
VCX3BQ9H321 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
VCX3BQ9H321 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
VCX3BQ9H321 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.41■□□□□ 0.86
VCX3BQ9H321 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VCX3BQ9H321 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.41■□□□□ 0.86
VCX3BQ9H321 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VCX3BQ9H321 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VCX3BQ9H321 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
VCX3BQ9H321 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
VCX3BQ9H321 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VCX3BQ9H321 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.41■□□□□ 0.86
VCX3BQ9H321 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
VCX3BQ9H321 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
VCX3BQ9H321 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms