Protein–RNA interactions for Protein: Q5VVM6

CCDC30, Coiled-coil domain-containing protein 30, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30Q5VVM6 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC27.57■■■□□ 2
CCDC30Q5VVM6 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
CCDC30Q5VVM6 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC27.57■■■□□ 2
CCDC30Q5VVM6 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC27.57■■■□□ 2
CCDC30Q5VVM6 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC27.57■■■□□ 2
CCDC30Q5VVM6 AC080038.3-201ENST00000623346 1952 ntBASIC27.57■■■□□ 2
CCDC30Q5VVM6 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC27.56■■■□□ 2
CCDC30Q5VVM6 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC27.56■■■□□ 2
CCDC30Q5VVM6 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC27.56■■■□□ 2
CCDC30Q5VVM6 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC27.56■■■□□ 2
CCDC30Q5VVM6 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC27.56■■■□□ 2
CCDC30Q5VVM6 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC27.56■■■□□ 2
CCDC30Q5VVM6 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC27.56■■■□□ 2
CCDC30Q5VVM6 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC27.56■■■□□ 2
CCDC30Q5VVM6 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC27.56■■■□□ 2
CCDC30Q5VVM6 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
CCDC30Q5VVM6 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC27.56■■■□□ 2
CCDC30Q5VVM6 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
CCDC30Q5VVM6 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC27.55■■■□□ 2
CCDC30Q5VVM6 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC27.55■■■□□ 2
CCDC30Q5VVM6 COX20-201ENST00000366528 568 ntTSL 2 BASIC27.55■■■□□ 2
CCDC30Q5VVM6 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC27.55■■■□□ 2
CCDC30Q5VVM6 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC27.55■■■□□ 2
CCDC30Q5VVM6 GLI3-203ENST00000437480 451 ntTSL 2 BASIC27.55■■■□□ 2
CCDC30Q5VVM6 AC079140.4-201ENST00000507448 529 ntBASIC27.55■■■□□ 2
CCDC30Q5VVM6 KRT18P61-201ENST00000585825 1298 ntBASIC27.55■■■□□ 2
CCDC30Q5VVM6 AP004607.4-201ENST00000530158 1459 ntBASIC27.55■■■□□ 2
CCDC30Q5VVM6 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
CCDC30Q5VVM6 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC27.55■■■□□ 2
CCDC30Q5VVM6 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC27.55■■■□□ 2
CCDC30Q5VVM6 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC27.55■■■□□ 2
CCDC30Q5VVM6 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
CCDC30Q5VVM6 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
CCDC30Q5VVM6 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC27.55■■■□□ 2
CCDC30Q5VVM6 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC27.55■■■□□ 2
CCDC30Q5VVM6 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
CCDC30Q5VVM6 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
CCDC30Q5VVM6 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
CCDC30Q5VVM6 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
CCDC30Q5VVM6 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC27.54■■■□□ 2
CCDC30Q5VVM6 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC27.54■■■□□ 2
CCDC30Q5VVM6 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC27.54■■■□□ 2
CCDC30Q5VVM6 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC27.54■■■□□ 2
CCDC30Q5VVM6 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC27.54■■■□□ 2
CCDC30Q5VVM6 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC27.53■■■□□ 2
CCDC30Q5VVM6 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC27.53■■■□□ 2
CCDC30Q5VVM6 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC27.53■■■□□ 2
CCDC30Q5VVM6 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC27.53■■■□□ 2
CCDC30Q5VVM6 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC27.53■■■□□ 2
CCDC30Q5VVM6 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC27.53■■■□□ 2
CCDC30Q5VVM6 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC27.53■■■□□ 2
CCDC30Q5VVM6 AC022517.1-201ENST00000592429 346 ntBASIC27.53■■■□□ 2
CCDC30Q5VVM6 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC27.53■■■□□ 2
CCDC30Q5VVM6 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC27.53■■■□□ 2
CCDC30Q5VVM6 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC27.53■■■□□ 2
CCDC30Q5VVM6 AC068473.5-201ENST00000616428 2072 ntBASIC27.53■■■□□ 2
CCDC30Q5VVM6 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC27.52■■■□□ 2
CCDC30Q5VVM6 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
CCDC30Q5VVM6 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC27.52■■■□□ 2
CCDC30Q5VVM6 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
CCDC30Q5VVM6 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC27.52■■■□□ 2
CCDC30Q5VVM6 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC27.52■■■□□ 2
CCDC30Q5VVM6 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC27.52■■■□□ 2
CCDC30Q5VVM6 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC27.52■■■□□ 2
CCDC30Q5VVM6 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC27.52■■■□□ 2
CCDC30Q5VVM6 AC004854.2-201ENST00000608450 1441 ntBASIC27.51■■□□□ 1.99
CCDC30Q5VVM6 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC27.51■■□□□ 1.99
CCDC30Q5VVM6 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
CCDC30Q5VVM6 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC27.51■■□□□ 1.99
CCDC30Q5VVM6 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC27.51■■□□□ 1.99
CCDC30Q5VVM6 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC27.51■■□□□ 1.99
CCDC30Q5VVM6 GALNS-213ENST00000569433 723 ntTSL 3 BASIC27.51■■□□□ 1.99
CCDC30Q5VVM6 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC27.51■■□□□ 1.99
CCDC30Q5VVM6 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC27.51■■□□□ 1.99
CCDC30Q5VVM6 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
CCDC30Q5VVM6 LTK-203ENST00000453182 2412 ntTSL 2 BASIC27.5■■□□□ 1.99
CCDC30Q5VVM6 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
CCDC30Q5VVM6 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
CCDC30Q5VVM6 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
CCDC30Q5VVM6 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
CCDC30Q5VVM6 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC27.5■■□□□ 1.99
CCDC30Q5VVM6 GXYLT1P2-201ENST00000433312 1230 ntBASIC27.5■■□□□ 1.99
CCDC30Q5VVM6 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC27.5■■□□□ 1.99
CCDC30Q5VVM6 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC27.5■■□□□ 1.99
CCDC30Q5VVM6 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC27.5■■□□□ 1.99
CCDC30Q5VVM6 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC27.5■■□□□ 1.99
CCDC30Q5VVM6 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC27.5■■□□□ 1.99
CCDC30Q5VVM6 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC27.49■■□□□ 1.99
CCDC30Q5VVM6 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC27.49■■□□□ 1.99
CCDC30Q5VVM6 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
CCDC30Q5VVM6 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
CCDC30Q5VVM6 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
CCDC30Q5VVM6 AP006587.3-201ENST00000525742 1516 ntBASIC27.49■■□□□ 1.99
CCDC30Q5VVM6 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
CCDC30Q5VVM6 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC27.49■■□□□ 1.99
CCDC30Q5VVM6 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
CCDC30Q5VVM6 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC27.48■■□□□ 1.99
CCDC30Q5VVM6 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC27.48■■□□□ 1.99
CCDC30Q5VVM6 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC27.48■■□□□ 1.99
CCDC30Q5VVM6 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC27.48■■□□□ 1.99
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms