Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
SNAP47Q5SQN1 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
SNAP47Q5SQN1 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SNAP47Q5SQN1 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
SNAP47Q5SQN1 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.89■□□□□ 0.93
SNAP47Q5SQN1 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
SNAP47Q5SQN1 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.89■□□□□ 0.93
SNAP47Q5SQN1 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.89■□□□□ 0.93
SNAP47Q5SQN1 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SNAP47Q5SQN1 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SNAP47Q5SQN1 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.89■□□□□ 0.93
SNAP47Q5SQN1 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SNAP47Q5SQN1 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SNAP47Q5SQN1 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SNAP47Q5SQN1 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SNAP47Q5SQN1 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SNAP47Q5SQN1 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SNAP47Q5SQN1 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
SNAP47Q5SQN1 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
SNAP47Q5SQN1 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.88■□□□□ 0.93
SNAP47Q5SQN1 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SNAP47Q5SQN1 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.88■□□□□ 0.93
SNAP47Q5SQN1 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.88■□□□□ 0.93
SNAP47Q5SQN1 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SNAP47Q5SQN1 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SNAP47Q5SQN1 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
SNAP47Q5SQN1 AP004607.4-201ENST00000530158 1459 ntBASIC20.88■□□□□ 0.93
SNAP47Q5SQN1 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SNAP47Q5SQN1 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SNAP47Q5SQN1 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SNAP47Q5SQN1 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.87■□□□□ 0.93
SNAP47Q5SQN1 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SNAP47Q5SQN1 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SNAP47Q5SQN1 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.87■□□□□ 0.93
SNAP47Q5SQN1 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.87■□□□□ 0.93
SNAP47Q5SQN1 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.87■□□□□ 0.93
SNAP47Q5SQN1 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SNAP47Q5SQN1 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.87■□□□□ 0.93
SNAP47Q5SQN1 AL024507.2-201ENST00000606070 2574 ntBASIC20.87■□□□□ 0.93
SNAP47Q5SQN1 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SNAP47Q5SQN1 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SNAP47Q5SQN1 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SNAP47Q5SQN1 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SNAP47Q5SQN1 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SNAP47Q5SQN1 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.86■□□□□ 0.93
SNAP47Q5SQN1 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SNAP47Q5SQN1 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SNAP47Q5SQN1 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.86■□□□□ 0.93
SNAP47Q5SQN1 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.86■□□□□ 0.93
SNAP47Q5SQN1 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SNAP47Q5SQN1 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SNAP47Q5SQN1 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SNAP47Q5SQN1 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
SNAP47Q5SQN1 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.86■□□□□ 0.93
SNAP47Q5SQN1 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
SNAP47Q5SQN1 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SNAP47Q5SQN1 LINC01960-201ENST00000563759 1884 ntBASIC20.86■□□□□ 0.93
SNAP47Q5SQN1 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.85■□□□□ 0.93
SNAP47Q5SQN1 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SNAP47Q5SQN1 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SNAP47Q5SQN1 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.85■□□□□ 0.93
SNAP47Q5SQN1 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
SNAP47Q5SQN1 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
SNAP47Q5SQN1 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
SNAP47Q5SQN1 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.85■□□□□ 0.93
SNAP47Q5SQN1 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SNAP47Q5SQN1 AC079140.4-201ENST00000507448 529 ntBASIC20.85■□□□□ 0.93
SNAP47Q5SQN1 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.85■□□□□ 0.93
SNAP47Q5SQN1 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SNAP47Q5SQN1 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SNAP47Q5SQN1 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.85■□□□□ 0.93
SNAP47Q5SQN1 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SNAP47Q5SQN1 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
SNAP47Q5SQN1 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
SNAP47Q5SQN1 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SNAP47Q5SQN1 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SNAP47Q5SQN1 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SNAP47Q5SQN1 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SNAP47Q5SQN1 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.84■□□□□ 0.93
SNAP47Q5SQN1 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SNAP47Q5SQN1 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.84■□□□□ 0.93
SNAP47Q5SQN1 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.84■□□□□ 0.93
SNAP47Q5SQN1 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.84■□□□□ 0.93
SNAP47Q5SQN1 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.84■□□□□ 0.93
SNAP47Q5SQN1 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.84■□□□□ 0.93
SNAP47Q5SQN1 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
SNAP47Q5SQN1 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SNAP47Q5SQN1 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SNAP47Q5SQN1 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SNAP47Q5SQN1 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SNAP47Q5SQN1 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.84■□□□□ 0.93
SNAP47Q5SQN1 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SNAP47Q5SQN1 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SNAP47Q5SQN1 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SNAP47Q5SQN1 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
SNAP47Q5SQN1 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.83■□□□□ 0.93
SNAP47Q5SQN1 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.83■□□□□ 0.93
SNAP47Q5SQN1 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.83■□□□□ 0.93
SNAP47Q5SQN1 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.83■□□□□ 0.93
SNAP47Q5SQN1 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms