Protein–RNA interactions for Protein: P25336

MSH3, DNA mismatch repair protein MSH3, yeastyeast

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH3P25336 YMR010WYMR010W 1218 nt5.27□□□□□ -1.57
MSH3P25336 TPM1YNL079C 600 nt5.27□□□□□ -1.57
MSH3P25336 MDM34YGL219C 1380 nt5.27□□□□□ -1.57
MSH3P25336 YMR111CYMR111C 1389 nt5.27□□□□□ -1.57
MSH3P25336 LAP3YNL239W 1365 nt5.27□□□□□ -1.57
MSH3P25336 TRM82YDR165W 1335 nt5.26□□□□□ -1.57
MSH3P25336 BOP2YLR267W 1713 nt5.26□□□□□ -1.57
MSH3P25336 YML020WYML020W 1995 nt5.26□□□□□ -1.57
MSH3P25336 UBC13YDR092W 462 nt5.26□□□□□ -1.57
MSH3P25336 YDR461C-AYDR461C-A 243 nt5.26□□□□□ -1.57
MSH3P25336 TMA20YER007C-A 546 nt5.26□□□□□ -1.57
MSH3P25336 LYS5YGL154C 819 nt5.26□□□□□ -1.57
MSH3P25336 YKE4YIL023C 1041 nt5.26□□□□□ -1.57
MSH3P25336 YJR128WYJR128W 360 nt5.26□□□□□ -1.57
MSH3P25336 YKL115CYKL115C 393 nt5.26□□□□□ -1.57
MSH3P25336 COQ9YLR201C 783 nt5.26□□□□□ -1.57
MSH3P25336 MCK1YNL307C 1128 nt5.26□□□□□ -1.57
MSH3P25336 UTP23YOR004W 765 nt5.26□□□□□ -1.57
MSH3P25336 PRM3YPL192C 402 nt5.26□□□□□ -1.57
MSH3P25336 CBP3YPL215W 1008 nt5.26□□□□□ -1.57
MSH3P25336 TOM5YPR133W-A 153 nt5.26□□□□□ -1.57
MSH3P25336 KRE29YER038C 1395 nt5.26□□□□□ -1.57
MSH3P25336 ENP2YGR145W 2124 nt5.26□□□□□ -1.57
MSH3P25336 GLO3YER122C 1482 nt5.26□□□□□ -1.57
MSH3P25336 LEU1YGL009C 2340 nt5.25□□□□□ -1.57
MSH3P25336 HPR1YDR138W 2259 nt5.25□□□□□ -1.57
MSH3P25336 SYP1YCR030C 2613 nt5.25□□□□□ -1.57
MSH3P25336 YCR007CYCR007C 720 nt5.25□□□□□ -1.57
MSH3P25336 TRM8YDL201W 861 nt5.25□□□□□ -1.57
MSH3P25336 DPP1YDR284C 870 nt5.25□□□□□ -1.57
MSH3P25336 UPF3YGR072W 1164 nt5.25□□□□□ -1.57
MSH3P25336 CYC1YJR048W 330 nt5.25□□□□□ -1.57
MSH3P25336 NFU1YKL040C 771 nt5.25□□□□□ -1.57
MSH3P25336 YKR011CYKR011C 1062 nt5.25□□□□□ -1.57
MSH3P25336 MAK3YPR051W 531 nt5.25□□□□□ -1.57
MSH3P25336 UBX3YDL091C 1368 nt5.25□□□□□ -1.57
MSH3P25336 FRE1YLR214W 2061 nt5.25□□□□□ -1.57
MSH3P25336 NAM9YNL137C 1461 nt5.25□□□□□ -1.57
MSH3P25336 SPH1YLR313C 1593 nt5.25□□□□□ -1.57
MSH3P25336 ORC4YPR162C 1590 nt5.25□□□□□ -1.57
MSH3P25336 YMR196WYMR196W 3267 nt5.24□□□□□ -1.57
MSH3P25336 SUR2YDR297W 1050 nt5.24□□□□□ -1.57
MSH3P25336 TOS8YGL096W 831 nt5.24□□□□□ -1.57
MSH3P25336 YPT35YHR105W 645 nt5.24□□□□□ -1.57
MSH3P25336 MRP49YKL167C 414 nt5.24□□□□□ -1.57
MSH3P25336 DCS1YLR270W 1053 nt5.24□□□□□ -1.57
MSH3P25336 PRM6YML047C 1059 nt5.24□□□□□ -1.57
MSH3P25336 MCM1YMR043W 861 nt5.24□□□□□ -1.57
MSH3P25336 FOL3YMR113W 1284 nt5.24□□□□□ -1.57
MSH3P25336 YOR263CYOR263C 408 nt5.24□□□□□ -1.57
MSH3P25336 NMD3YHR170W 1557 nt5.24□□□□□ -1.57
MSH3P25336 ARP9YMR033W 1404 nt5.23□□□□□ -1.57
MSH3P25336 YBR139WYBR139W 1527 nt5.23□□□□□ -1.57
MSH3P25336 PEA2YER149C 1263 nt5.23□□□□□ -1.57
MSH3P25336 YER165C-AYER165C-A 357 nt5.23□□□□□ -1.57
MSH3P25336 YIL156W-AYIL156W-A 402 nt5.23□□□□□ -1.57
MSH3P25336 YJL175WYJL175W 513 nt5.23□□□□□ -1.57
MSH3P25336 CDC123YLR215C 1083 nt5.23□□□□□ -1.57
MSH3P25336 GIM5YML094W 492 nt5.23□□□□□ -1.57
MSH3P25336 SUP35YDR172W 2058 nt5.23□□□□□ -1.57
MSH3P25336 HRK1YOR267C 2280 nt5.23□□□□□ -1.57
MSH3P25336 FAP1YNL023C 2898 nt5.23□□□□□ -1.57
MSH3P25336 BLM10YFL007W 6432 nt5.23□□□□□ -1.57
MSH3P25336 CDC15YAR019C 2925 nt5.23□□□□□ -1.57
MSH3P25336 HCA4YJL033W 2313 nt5.23□□□□□ -1.57
MSH3P25336 SER33YIL074C 1410 nt5.23□□□□□ -1.57
MSH3P25336 RUD3YOR216C 1455 nt5.22□□□□□ -1.57
MSH3P25336 APA2YDR530C 978 nt5.22□□□□□ -1.57
MSH3P25336 YJL133C-AYJL133C-A 225 nt5.22□□□□□ -1.57
MSH3P25336 TSR4YOL022C 1227 nt5.22□□□□□ -1.57
MSH3P25336 SAC1YKL212W 1872 nt5.22□□□□□ -1.57
MSH3P25336 NGG1YDR176W 2109 nt5.21□□□□□ -1.57
MSH3P25336 MNN1YER001W 2289 nt5.21□□□□□ -1.58
MSH3P25336 GMC1YDR506C 1827 nt5.21□□□□□ -1.58
MSH3P25336 TRM12YML005W 1389 nt5.21□□□□□ -1.58
MSH3P25336 YAP1802YGR241C 1707 nt5.21□□□□□ -1.58
MSH3P25336 YDR271CYDR271C 372 nt5.21□□□□□ -1.58
MSH3P25336 MAM1YER106W 909 nt5.21□□□□□ -1.58
MSH3P25336 ATG27YJL178C 816 nt5.21□□□□□ -1.58
MSH3P25336 VPS69YPR087W 321 nt5.21□□□□□ -1.58
MSH3P25336 OPY1YBR129C 987 nt5.21□□□□□ -1.58
MSH3P25336 VPS30YPL120W 1674 nt5.21□□□□□ -1.58
MSH3P25336 SLF1YDR515W 1344 nt5.21□□□□□ -1.58
MSH3P25336 HRR25YPL204W 1485 nt5.2□□□□□ -1.58
MSH3P25336 SKG3YLR187W 3081 nt5.2□□□□□ -1.58
MSH3P25336 BUD27YFL023W 2391 nt5.2□□□□□ -1.58
MSH3P25336 MPS3YJL019W 2049 nt5.2□□□□□ -1.58
MSH3P25336 YCR050CYCR050C 309 nt5.2□□□□□ -1.58
MSH3P25336 YJR087WYJR087W 351 nt5.2□□□□□ -1.58
MSH3P25336 FYV7YLR068W 456 nt5.2□□□□□ -1.58
MSH3P25336 YMR315WYMR315W 1050 nt5.2□□□□□ -1.58
MSH3P25336 ATG8YBL078C 354 nt5.2□□□□□ -1.58
MSH3P25336 TMA64YDR117C 1698 nt5.2□□□□□ -1.58
MSH3P25336 PRM7YDL039C 2097 nt5.2□□□□□ -1.58
MSH3P25336 SUM1YDR310C 3189 nt5.2□□□□□ -1.58
MSH3P25336 RXT3YDL076C 885 nt5.19□□□□□ -1.58
MSH3P25336 YEL045CYEL045C 426 nt5.19□□□□□ -1.58
MSH3P25336 LOC1YFR001W 615 nt5.19□□□□□ -1.58
MSH3P25336 YJR020WYJR020W 333 nt5.19□□□□□ -1.58
MSH3P25336 SRP40YKR092C 1221 nt5.19□□□□□ -1.58
Retrieved 100 of 7,029 protein–RNA pairs in 29.4 ms