RNA–Protein interactions for RNA: YPL120W

VPS30, Transcript of Subunit of phosphatidylinositol (PtdIns) 3-kinase complexes I and II, yeastyeast

Gene VPS30, Length 1,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS30YPL120W MTC1P47018 478 aaKnown RBP14.4□□□□□ -0.1
VPS30YPL120W DRS1P32892 752 aaKnown RBP13.34□□□□□ -0.27
VPS30YPL120W FAP1P53971 965 aa13.2□□□□□ -0.3
VPS30YPL120W PRY3P47033 881 aa12.39□□□□□ -0.43
VPS30YPL120W PRI1P10363 409 aa12.22□□□□□ -0.45
VPS30YPL120W AAD16Q02895 342 aa12.18□□□□□ -0.46
VPS30YPL120W ISW2Q08773 1120 aa12.01□□□□□ -0.49
VPS30YPL120W RPG1P38249 964 aaKnown RBP11.87□□□□□ -0.51
VPS30YPL120W DIP2Q12220 943 aaPredicted RBP11.75□□□□□ -0.53
VPS30YPL120W HAA1Q12753 694 aaKnown RBP11.59□□□□□ -0.55
VPS30YPL120W YCK3P39962 524 aa11.59□□□□□ -0.55
VPS30YPL120W TSR3Q12094 313 aaKnown RBP11.56□□□□□ -0.56
VPS30YPL120W RSE1Q04693 1361 aaKnown RBP11.4□□□□□ -0.58
VPS30YPL120W AVT3P36062 692 aa11.24□□□□□ -0.61
VPS30YPL120W MRPL32P25348 183 aa11.14□□□□□ -0.63
VPS30YPL120W RPL17AP05740 184 aaKnown RBP11.05□□□□□ -0.64
VPS30YPL120W RPL17BP46990 184 aaKnown RBP11.05□□□□□ -0.64
VPS30YPL120W REB1P21538 810 aa11.04□□□□□ -0.64
VPS30YPL120W BFR2Q06631 534 aaKnown RBP11.04□□□□□ -0.64
VPS30YPL120W YGL015CP33199 130 aa10.7□□□□□ -0.7
VPS30YPL120W SPT21P35209 758 aa10.5□□□□□ -0.73
VPS30YPL120W CDC27P38042 758 aa10.5□□□□□ -0.73
VPS30YPL120W YKR023WP36119 530 aaKnown RBP10.44□□□□□ -0.74
VPS30YPL120W HOP09932 586 aa10.26□□□□□ -0.77
VPS30YPL120W UBP10P53874 792 aaPredicted RBP10.23□□□□□ -0.77
VPS30YPL120W TFC8Q12308 588 aa10.23□□□□□ -0.77
VPS30YPL120W DCD1P06773 312 aa10.22□□□□□ -0.77
VPS30YPL120W MAP2P38174 421 aaKnown RBP10.21□□□□□ -0.78
VPS30YPL120W RIM101P33400 625 aa10.12□□□□□ -0.79
VPS30YPL120W SCY1P53009 804 aa10□□□□□ -0.81
VPS30YPL120W BCH2P36122 765 aa9.9□□□□□ -0.83
VPS30YPL120W SLX5P32828 619 aaKnown RBP9.88□□□□□ -0.83
VPS30YPL120W TIF4632P39936 914 aaKnown RBP9.86□□□□□ -0.83
VPS30YPL120W BUD31P25337 157 aaPredicted RBP9.84□□□□□ -0.83
VPS30YPL120W TGL3P40308 642 aa9.78□□□□□ -0.84
VPS30YPL120W OXP1P28273 1286 aa9.77□□□□□ -0.85
VPS30YPL120W PTP3P40048 928 aa9.71□□□□□ -0.86
VPS30YPL120W YIL055CP40523 627 aaKnown RBP9.71□□□□□ -0.86
VPS30YPL120W EPS1P40557 701 aa9.65□□□□□ -0.86
VPS30YPL120W BDF1P35817 686 aa9.61□□□□□ -0.87
VPS30YPL120W UBP9P39967 754 aa9.57□□□□□ -0.88
VPS30YPL120W TFA1P36100 482 aa9.56□□□□□ -0.88
VPS30YPL120W YAH1Q12184 172 aaKnown RBP9.53□□□□□ -0.88
VPS30YPL120W RSM7P47150 247 aa9.51□□□□□ -0.89
VPS30YPL120W BBC1P47068 1157 aa9.49□□□□□ -0.89
VPS30YPL120W AI2P03876 854 aa9.45□□□□□ -0.9
VPS30YPL120W SIS1P25294 352 aaKnown RBP9.42□□□□□ -0.9
VPS30YPL120W YOR238WQ08634 303 aa9.34□□□□□ -0.91
VPS30YPL120W MST1P07236 462 aa9.31□□□□□ -0.92
VPS30YPL120W YLR271WQ06152 274 aa9.31□□□□□ -0.92
VPS30YPL120W NSR1P27476 414 aaKnown RBP RIP-Chip data9.27□□□□□ -0.93not detected
VPS30YPL120W YAP5P40574 245 aa9.26□□□□□ -0.93
VPS30YPL120W YBL029C-AQ3E756 94 aa9.24□□□□□ -0.93
VPS30YPL120W PSD2P53037 1138 aaKnown RBP9.18□□□□□ -0.94
VPS30YPL120W ARP8Q12386 881 aaKnown RBP RIP-Chip data9.18□□□□□ -0.94not detected
VPS30YPL120W SSP1P38871 571 aa9.17□□□□□ -0.94
VPS30YPL120W VNX1P42839 908 aa9.12□□□□□ -0.95
VPS30YPL120W WSC3Q12215 556 aa9.12□□□□□ -0.95
VPS30YPL120W MRM1P25270 412 aa9.11□□□□□ -0.95
VPS30YPL120W GTT3P39996 337 aa9.09□□□□□ -0.95
VPS30YPL120W SPP1Q03012 353 aa9.08□□□□□ -0.96
VPS30YPL120W PIB1Q06651 286 aa9.04□□□□□ -0.96
VPS30YPL120W MGA2P40578 1113 aa8.97□□□□□ -0.97
VPS30YPL120W CST9Q06032 482 aa8.97□□□□□ -0.97
VPS30YPL120W TIF11P38912 153 aaKnown RBP8.97□□□□□ -0.97
VPS30YPL120W RTG3P38165 486 aa8.9□□□□□ -0.98
VPS30YPL120W YMR1P47147 688 aaKnown RBP RIP-Chip data8.9□□□□□ -0.98not detected
VPS30YPL120W ULI1P43604 169 aa8.87□□□□□ -0.99
VPS30YPL120W VPS29P38759 282 aa8.86□□□□□ -0.99
VPS30YPL120W DBP1P24784 617 aaKnown RBP8.85□□□□□ -0.99
VPS30YPL120W YFR006WP43590 535 aa8.84□□□□□ -0.99
VPS30YPL120W LDB19Q12502 818 aa8.84□□□□□ -0.99
VPS30YPL120W FKH1P40466 484 aa8.83□□□□□ -1
VPS30YPL120W YJL171CP46992 396 aa8.83□□□□□ -1
VPS30YPL120W AIR2Q12476 344 aaKnown RBP8.82□□□□□ -1
VPS30YPL120W MSB4Q12317 492 aa8.81□□□□□ -1
VPS30YPL120W IOC2Q12072 812 aa8.79□□□□□ -1
VPS30YPL120W EAP1P36041 632 aaKnown RBP8.78□□□□□ -1
VPS30YPL120W STS1P38637 319 aa8.78□□□□□ -1
VPS30YPL120W SET4P42948 560 aa8.78□□□□□ -1
VPS30YPL120W YOL036WQ08206 761 aa8.78□□□□□ -1
VPS30YPL120W RCR1P38212 213 aa8.78□□□□□ -1
VPS30YPL120W VMA1P17255 1071 aaKnown RBP8.75□□□□□ -1.01
VPS30YPL120W TRP5P00931 707 aaKnown RBP8.7□□□□□ -1.02
VPS30YPL120W SAM3Q08986 587 aa8.69□□□□□ -1.02
VPS30YPL120W RTG1P32607 177 aa8.68□□□□□ -1.02
VPS30YPL120W BMT6Q12291 365 aa8.68□□□□□ -1.02
VPS30YPL120W YNL035CP53962 389 aaKnown RBP8.62□□□□□ -1.03
VPS30YPL120W NCR1Q12200 1170 aa8.62□□□□□ -1.03
VPS30YPL120W GYP5Q12344 894 aa8.6□□□□□ -1.03
VPS30YPL120W SEC61P32915 480 aa8.59□□□□□ -1.03
VPS30YPL120W INO80P53115 1489 aa8.58□□□□□ -1.04
VPS30YPL120W MON2P48563 1636 aaPredicted RBP8.58□□□□□ -1.04
VPS30YPL120W ABP1P15891 592 aaKnown RBP8.57□□□□□ -1.04
VPS30YPL120W TFG1P41895 735 aaPredicted RBP8.56□□□□□ -1.04
VPS30YPL120W HTA1P04911 132 aaKnown RBP8.53□□□□□ -1.04
VPS30YPL120W HTA2P04912 132 aa8.53□□□□□ -1.04
VPS30YPL120W DCW1P36091 449 aa8.53□□□□□ -1.04
VPS30YPL120W JIP4Q03361 876 aa8.52□□□□□ -1.05
VPS30YPL120W MIF2P35201 549 aa8.49□□□□□ -1.05
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms