RNA–Protein interactions for RNA: YDL201W

TRM8, Transcript of Noncatalytic subunit of a tRNA methyltransferase complex, yeastyeast

Gene TRM8, Length 861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM8YDL201W MTC1P47018 478 aaKnown RBP13.88□□□□□ -0.19
TRM8YDL201W FAP1P53971 965 aa12.94□□□□□ -0.34
TRM8YDL201W DRS1P32892 752 aaKnown RBP12.57□□□□□ -0.4
TRM8YDL201W PRY3P47033 881 aa12.18□□□□□ -0.46
TRM8YDL201W PRI1P10363 409 aa11.92□□□□□ -0.5
TRM8YDL201W AAD16Q02895 342 aa11.89□□□□□ -0.51
TRM8YDL201W ISW2Q08773 1120 aa11.57□□□□□ -0.56
TRM8YDL201W YCK3P39962 524 aa11.52□□□□□ -0.57
TRM8YDL201W RPG1P38249 964 aaKnown RBP11.48□□□□□ -0.57
TRM8YDL201W HAA1Q12753 694 aaKnown RBP11.37□□□□□ -0.59
TRM8YDL201W TSR3Q12094 313 aaKnown RBP11.26□□□□□ -0.61
TRM8YDL201W DIP2Q12220 943 aaPredicted RBP11.16□□□□□ -0.62
TRM8YDL201W RSE1Q04693 1361 aaKnown RBP10.89□□□□□ -0.67
TRM8YDL201W MRPL32P25348 183 aa10.79□□□□□ -0.68
TRM8YDL201W AVT3P36062 692 aa10.65□□□□□ -0.7
TRM8YDL201W RPL17AP05740 184 aaKnown RBP10.58□□□□□ -0.72
TRM8YDL201W RPL17BP46990 184 aaKnown RBP10.58□□□□□ -0.72
TRM8YDL201W REB1P21538 810 aa10.57□□□□□ -0.72
TRM8YDL201W YGL015CP33199 130 aa10.45□□□□□ -0.74
TRM8YDL201W BFR2Q06631 534 aaKnown RBP10.25□□□□□ -0.77
TRM8YDL201W CDC27P38042 758 aa10.22□□□□□ -0.77
TRM8YDL201W SPT21P35209 758 aa10.11□□□□□ -0.79
TRM8YDL201W YKR023WP36119 530 aaKnown RBP10.09□□□□□ -0.79
TRM8YDL201W UBP10P53874 792 aaPredicted RBP9.95□□□□□ -0.82
TRM8YDL201W MAP2P38174 421 aaKnown RBP9.94□□□□□ -0.82
TRM8YDL201W HOP09932 586 aa9.89□□□□□ -0.83
TRM8YDL201W DCD1P06773 312 aa9.88□□□□□ -0.83
TRM8YDL201W TFC8Q12308 588 aa9.88□□□□□ -0.83
TRM8YDL201W BUD31P25337 157 aaPredicted RBP9.77□□□□□ -0.85
TRM8YDL201W SCY1P53009 804 aa9.67□□□□□ -0.86
TRM8YDL201W RIM101P33400 625 aa9.66□□□□□ -0.86
TRM8YDL201W SLX5P32828 619 aaKnown RBP9.55□□□□□ -0.88
TRM8YDL201W BCH2P36122 765 aa9.54□□□□□ -0.88
TRM8YDL201W TIF4632P39936 914 aaKnown RBP9.53□□□□□ -0.88
TRM8YDL201W TGL3P40308 642 aa9.49□□□□□ -0.89
TRM8YDL201W OXP1P28273 1286 aa9.33□□□□□ -0.92
TRM8YDL201W UBP9P39967 754 aa9.31□□□□□ -0.92
TRM8YDL201W EPS1P40557 701 aa9.27□□□□□ -0.93
TRM8YDL201W SIS1P25294 352 aaKnown RBP9.25□□□□□ -0.93
TRM8YDL201W BDF1P35817 686 aa9.25□□□□□ -0.93
TRM8YDL201W TFA1P36100 482 aa9.21□□□□□ -0.94
TRM8YDL201W PTP3P40048 928 aa9.19□□□□□ -0.94
TRM8YDL201W YIL055CP40523 627 aaKnown RBP9.17□□□□□ -0.94
TRM8YDL201W RQC2Q12532 1038 aaKnown RBP9.11□□□□□ -0.95
TRM8YDL201W MST1P07236 462 aa9.06□□□□□ -0.96
TRM8YDL201W RSM7P47150 247 aa9.04□□□□□ -0.96
TRM8YDL201W BBC1P47068 1157 aa9.01□□□□□ -0.97
TRM8YDL201W YOR238WQ08634 303 aa9.01□□□□□ -0.97
TRM8YDL201W YAH1Q12184 172 aaKnown RBP9.01□□□□□ -0.97
TRM8YDL201W AI2P03876 854 aa9□□□□□ -0.97
TRM8YDL201W YBL029C-AQ3E756 94 aa9□□□□□ -0.97
TRM8YDL201W NSR1P27476 414 aaKnown RBP RIP-Chip data8.96□□□□□ -0.98not detected
TRM8YDL201W YAP5P40574 245 aa8.9□□□□□ -0.98
TRM8YDL201W VNX1P42839 908 aa8.87□□□□□ -0.99
TRM8YDL201W YLR271WQ06152 274 aa8.84□□□□□ -0.99
TRM8YDL201W WSC3Q12215 556 aa8.8□□□□□ -1
TRM8YDL201W SPP1Q03012 353 aa8.79□□□□□ -1
TRM8YDL201W PSD2P53037 1138 aaKnown RBP8.75□□□□□ -1.01
TRM8YDL201W GTT3P39996 337 aa8.71□□□□□ -1.02
TRM8YDL201W TIF11P38912 153 aaKnown RBP8.68□□□□□ -1.02
TRM8YDL201W PIB1Q06651 286 aa8.67□□□□□ -1.02
TRM8YDL201W MRM1P25270 412 aa8.66□□□□□ -1.02
TRM8YDL201W AIR2Q12476 344 aaKnown RBP8.64□□□□□ -1.03
TRM8YDL201W FKH1P40466 484 aa8.62□□□□□ -1.03
TRM8YDL201W SSP1P38871 571 aa8.6□□□□□ -1.03
TRM8YDL201W TAF7Q05021 590 aa8.59□□□□□ -1.03
TRM8YDL201W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.57□□□□□ -1.04 RIP-Chip
TRM8YDL201W LDB19Q12502 818 aa8.57□□□□□ -1.04
TRM8YDL201W ULI1P43604 169 aa8.56□□□□□ -1.04
TRM8YDL201W YJL171CP46992 396 aa8.55□□□□□ -1.04
TRM8YDL201W IOC2Q12072 812 aa8.54□□□□□ -1.04
TRM8YDL201W CST9Q06032 482 aa8.52□□□□□ -1.05
TRM8YDL201W VPS29P38759 282 aa8.48□□□□□ -1.05
TRM8YDL201W MSB4Q12317 492 aa8.48□□□□□ -1.05
TRM8YDL201W YMR1P47147 688 aaKnown RBP RIP-Chip data8.47□□□□□ -1.05not detected
TRM8YDL201W DBP1P24784 617 aaKnown RBP8.45□□□□□ -1.06
TRM8YDL201W SET4P42948 560 aa8.45□□□□□ -1.06
TRM8YDL201W YOL036WQ08206 761 aa8.45□□□□□ -1.06
TRM8YDL201W MGA2P40578 1113 aa8.44□□□□□ -1.06
TRM8YDL201W YFR006WP43590 535 aa8.44□□□□□ -1.06
TRM8YDL201W EAP1P36041 632 aaKnown RBP8.43□□□□□ -1.06
TRM8YDL201W RTG3P38165 486 aa8.43□□□□□ -1.06
TRM8YDL201W BMT6Q12291 365 aa8.42□□□□□ -1.06
TRM8YDL201W STS1P38637 319 aa8.41□□□□□ -1.06
TRM8YDL201W TRP5P00931 707 aaKnown RBP8.39□□□□□ -1.07
TRM8YDL201W VMA1P17255 1071 aaKnown RBP8.38□□□□□ -1.07
TRM8YDL201W RTG1P32607 177 aa8.37□□□□□ -1.07
TRM8YDL201W RCR1P38212 213 aa8.36□□□□□ -1.07
TRM8YDL201W SAM3Q08986 587 aa8.34□□□□□ -1.07
TRM8YDL201W NCR1Q12200 1170 aa8.31□□□□□ -1.08
TRM8YDL201W YNL035CP53962 389 aaKnown RBP8.3□□□□□ -1.08
TRM8YDL201W SEC61P32915 480 aa8.28□□□□□ -1.08
TRM8YDL201W GYP5Q12344 894 aa8.2□□□□□ -1.1
TRM8YDL201W DAN4P47179 1161 aa8.19□□□□□ -1.1
TRM8YDL201W ABP1P15891 592 aaKnown RBP8.17□□□□□ -1.1
TRM8YDL201W TFG1P41895 735 aaPredicted RBP8.17□□□□□ -1.1
TRM8YDL201W JIP4Q03361 876 aa8.16□□□□□ -1.1
TRM8YDL201W DCW1P36091 449 aa8.15□□□□□ -1.1
TRM8YDL201W HTA1P04911 132 aaKnown RBP8.14□□□□□ -1.11
TRM8YDL201W HTA2P04912 132 aa8.14□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms