RNA–Protein interactions for RNA: YHR105W

YPT35, Transcript of Endosomal protein of unknown function, yeastyeast

Gene YPT35, Length 645 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT35YHR105W MTC1P47018 478 aaKnown RBP12.49□□□□□ -0.41
YPT35YHR105W DRS1P32892 752 aaKnown RBP11.99□□□□□ -0.49
YPT35YHR105W FAP1P53971 965 aa10.97□□□□□ -0.65
YPT35YHR105W DIP2Q12220 943 aaPredicted RBP10.4□□□□□ -0.74
YPT35YHR105W PRI1P10363 409 aa10.37□□□□□ -0.75
YPT35YHR105W ISW2Q08773 1120 aa10.33□□□□□ -0.76
YPT35YHR105W AAD16Q02895 342 aa10.28□□□□□ -0.76
YPT35YHR105W PRY3P47033 881 aa10.27□□□□□ -0.77
YPT35YHR105W RPG1P38249 964 aaKnown RBP10.19□□□□□ -0.78
YPT35YHR105W BFR2Q06631 534 aaKnown RBP10.15□□□□□ -0.78
YPT35YHR105W AVT3P36062 692 aa10.08□□□□□ -0.8
YPT35YHR105W RSE1Q04693 1361 aaKnown RBP9.98□□□□□ -0.81
YPT35YHR105W TSR3Q12094 313 aaKnown RBP9.82□□□□□ -0.84
YPT35YHR105W HAA1Q12753 694 aaKnown RBP9.65□□□□□ -0.86
YPT35YHR105W RPL17AP05740 184 aaKnown RBP9.64□□□□□ -0.87
YPT35YHR105W RPL17BP46990 184 aaKnown RBP9.64□□□□□ -0.87
YPT35YHR105W YCK3P39962 524 aa9.62□□□□□ -0.87
YPT35YHR105W REB1P21538 810 aa9.59□□□□□ -0.87
YPT35YHR105W TFA1P36100 482 aa9.49□□□□□ -0.89
YPT35YHR105W MRPL32P25348 183 aa9.46□□□□□ -0.9
YPT35YHR105W SPT21P35209 758 aa9.2□□□□□ -0.94
YPT35YHR105W YKR023WP36119 530 aaKnown RBP9.05□□□□□ -0.96
YPT35YHR105W CDC27P38042 758 aa9□□□□□ -0.97
YPT35YHR105W YGL015CP33199 130 aa8.99□□□□□ -0.97
YPT35YHR105W RIM101P33400 625 aa8.96□□□□□ -0.98
YPT35YHR105W HOP09932 586 aa8.88□□□□□ -0.99
YPT35YHR105W TFC8Q12308 588 aa8.87□□□□□ -0.99
YPT35YHR105W DCD1P06773 312 aa8.83□□□□□ -1
YPT35YHR105W UBP10P53874 792 aaPredicted RBP8.72□□□□□ -1.01
YPT35YHR105W MAP2P38174 421 aaKnown RBP8.7□□□□□ -1.02
YPT35YHR105W OXP1P28273 1286 aa8.66□□□□□ -1.02
YPT35YHR105W YIL055CP40523 627 aaKnown RBP8.6□□□□□ -1.03
YPT35YHR105W BCH2P36122 765 aa8.59□□□□□ -1.03
YPT35YHR105W SCY1P53009 804 aa8.59□□□□□ -1.03
YPT35YHR105W PTP3P40048 928 aa8.57□□□□□ -1.04
YPT35YHR105W YAH1Q12184 172 aaKnown RBP8.49□□□□□ -1.05
YPT35YHR105W SLX5P32828 619 aaKnown RBP8.47□□□□□ -1.05
YPT35YHR105W RSM7P47150 247 aa8.44□□□□□ -1.06
YPT35YHR105W EPS1P40557 701 aa8.41□□□□□ -1.06
YPT35YHR105W TIF4632P39936 914 aaKnown RBP8.4□□□□□ -1.06
YPT35YHR105W BDF1P35817 686 aa8.36□□□□□ -1.07
YPT35YHR105W BBC1P47068 1157 aa8.35□□□□□ -1.07
YPT35YHR105W AI2P03876 854 aa8.33□□□□□ -1.08
YPT35YHR105W TGL3P40308 642 aa8.33□□□□□ -1.08
YPT35YHR105W YLR271WQ06152 274 aa8.33□□□□□ -1.08
YPT35YHR105W SSP1P38871 571 aa8.32□□□□□ -1.08
YPT35YHR105W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.27□□□□□ -1.09not detected
YPT35YHR105W PSD2P53037 1138 aaKnown RBP8.17□□□□□ -1.1
YPT35YHR105W RQC2Q12532 1038 aaKnown RBP8.13□□□□□ -1.11
YPT35YHR105W MGA2P40578 1113 aa8.09□□□□□ -1.11
YPT35YHR105W BUD31P25337 157 aaPredicted RBP8.08□□□□□ -1.12
YPT35YHR105W MRM1P25270 412 aa8.05□□□□□ -1.12
YPT35YHR105W CST9Q06032 482 aa8.05□□□□□ -1.12
YPT35YHR105W NSR1P27476 414 aaKnown RBP RIP-Chip data8.03□□□□□ -1.12not detected
YPT35YHR105W YOR238WQ08634 303 aa8.03□□□□□ -1.12
YPT35YHR105W UBP9P39967 754 aa8.02□□□□□ -1.13
YPT35YHR105W YAP5P40574 245 aa8.01□□□□□ -1.13
YPT35YHR105W MST1P07236 462 aa7.99□□□□□ -1.13
YPT35YHR105W RTG3P38165 486 aa7.91□□□□□ -1.14
YPT35YHR105W DMA1P38823 416 aa7.86□□□□□ -1.15
YPT35YHR105W YMR1P47147 688 aaKnown RBP RIP-Chip data7.85□□□□□ -1.15not detected
YPT35YHR105W PIB1Q06651 286 aa7.85□□□□□ -1.15
YPT35YHR105W VPS29P38759 282 aa7.84□□□□□ -1.15
YPT35YHR105W GTT3P39996 337 aa7.84□□□□□ -1.15
YPT35YHR105W RCR1P38212 213 aa7.83□□□□□ -1.16
YPT35YHR105W YBL029C-AQ3E756 94 aa7.83□□□□□ -1.16
YPT35YHR105W DBP1P24784 617 aaKnown RBP7.8□□□□□ -1.16
YPT35YHR105W WSC3Q12215 556 aa7.79□□□□□ -1.16
YPT35YHR105W VNX1P42839 908 aa7.77□□□□□ -1.17
YPT35YHR105W YFR006WP43590 535 aa7.77□□□□□ -1.17
YPT35YHR105W SIS1P25294 352 aaKnown RBP7.76□□□□□ -1.17
YPT35YHR105W STS1P38637 319 aa7.75□□□□□ -1.17
YPT35YHR105W SPP1Q03012 353 aa7.72□□□□□ -1.17
YPT35YHR105W VMA1P17255 1071 aaKnown RBP7.68□□□□□ -1.18
YPT35YHR105W RAM2P29703 316 aa7.67□□□□□ -1.18
YPT35YHR105W TIF11P38912 153 aaKnown RBP7.67□□□□□ -1.18
YPT35YHR105W MSB4Q12317 492 aa7.64□□□□□ -1.19
YPT35YHR105W MAK11P20484 414 aaKnown RBP7.63□□□□□ -1.19
YPT35YHR105W YOL036WQ08206 761 aa7.63□□□□□ -1.19
YPT35YHR105W SET4P42948 560 aa7.62□□□□□ -1.19
YPT35YHR105W ULI1P43604 169 aa7.61□□□□□ -1.19
YPT35YHR105W SAM3Q08986 587 aa7.61□□□□□ -1.19
YPT35YHR105W EAP1P36041 632 aaKnown RBP7.6□□□□□ -1.19
YPT35YHR105W MIF2P35201 549 aa7.58□□□□□ -1.2
YPT35YHR105W GYP5Q12344 894 aa7.55□□□□□ -1.2
YPT35YHR105W IOC2Q12072 812 aa7.54□□□□□ -1.2
YPT35YHR105W LDB19Q12502 818 aa7.54□□□□□ -1.2
YPT35YHR105W TRP5P00931 707 aaKnown RBP7.52□□□□□ -1.21
YPT35YHR105W COQ8P27697 501 aa7.52□□□□□ -1.21
YPT35YHR105W ABP1P15891 592 aaKnown RBP7.51□□□□□ -1.21
YPT35YHR105W EDS1P38073 919 aa7.5□□□□□ -1.21
YPT35YHR105W GRE2Q12068 342 aaKnown RBP7.49□□□□□ -1.21
YPT35YHR105W PTC3P34221 468 aaKnown RBP7.48□□□□□ -1.21
YPT35YHR105W DCW1P36091 449 aa7.48□□□□□ -1.21
YPT35YHR105W FKH1P40466 484 aa7.48□□□□□ -1.21
YPT35YHR105W HTA1P04911 132 aaKnown RBP7.47□□□□□ -1.21
YPT35YHR105W HTA2P04912 132 aa7.47□□□□□ -1.21
YPT35YHR105W AIR2Q12476 344 aaKnown RBP7.46□□□□□ -1.22
YPT35YHR105W RTG1P32607 177 aa7.45□□□□□ -1.22
YPT35YHR105W ATH1P48016 1211 aa7.45□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms