RNA–Protein interactions for RNA: YGL219C

MDM34, Transcript of Mitochondrial component of the ERMES complex, yeastyeast

Gene MDM34, Length 1,380 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MDM34YGL219C FAP1P53971 965 aa13.58□□□□□ -0.23
MDM34YGL219C MTC1P47018 478 aaKnown RBP13.42□□□□□ -0.26
MDM34YGL219C PRY3P47033 881 aa12.81□□□□□ -0.36
MDM34YGL219C AAD16Q02895 342 aa12.14□□□□□ -0.47
MDM34YGL219C PRI1P10363 409 aa12.04□□□□□ -0.48
MDM34YGL219C YCK3P39962 524 aa11.97□□□□□ -0.49
MDM34YGL219C HAA1Q12753 694 aaKnown RBP11.93□□□□□ -0.5
MDM34YGL219C DRS1P32892 752 aaKnown RBP11.57□□□□□ -0.56
MDM34YGL219C ISW2Q08773 1120 aa11.44□□□□□ -0.58
MDM34YGL219C RPG1P38249 964 aaKnown RBP11.33□□□□□ -0.6
MDM34YGL219C TSR3Q12094 313 aaKnown RBP11.3□□□□□ -0.6
MDM34YGL219C MRPL32P25348 183 aa10.9□□□□□ -0.66
MDM34YGL219C YGL015CP33199 130 aa10.8□□□□□ -0.68
MDM34YGL219C BUD31P25337 157 aaPredicted RBP10.47□□□□□ -0.73
MDM34YGL219C RSE1Q04693 1361 aaKnown RBP10.36□□□□□ -0.75
MDM34YGL219C DIP2Q12220 943 aaPredicted RBP10.32□□□□□ -0.76
MDM34YGL219C REB1P21538 810 aa10.21□□□□□ -0.78
MDM34YGL219C RPL17AP05740 184 aaKnown RBP10.11□□□□□ -0.79
MDM34YGL219C RPL17BP46990 184 aaKnown RBP10.11□□□□□ -0.79
MDM34YGL219C CDC27P38042 758 aa10.09□□□□□ -0.79
MDM34YGL219C UBP10P53874 792 aaPredicted RBP10□□□□□ -0.81
MDM34YGL219C MAP2P38174 421 aaKnown RBP9.93□□□□□ -0.82
MDM34YGL219C SIS1P25294 352 aaKnown RBP9.88□□□□□ -0.83
MDM34YGL219C AVT3P36062 692 aa9.79□□□□□ -0.84
MDM34YGL219C BFR2Q06631 534 aaKnown RBP9.75□□□□□ -0.85
MDM34YGL219C YKR023WP36119 530 aaKnown RBP9.74□□□□□ -0.85
MDM34YGL219C UBP9P39967 754 aa9.71□□□□□ -0.86
MDM34YGL219C TIF4632P39936 914 aaKnown RBP9.63□□□□□ -0.87
MDM34YGL219C TGL3P40308 642 aa9.56□□□□□ -0.88
MDM34YGL219C DCD1P06773 312 aa9.55□□□□□ -0.88
MDM34YGL219C HOP09932 586 aa9.55□□□□□ -0.88
MDM34YGL219C SPT21P35209 758 aa9.55□□□□□ -0.88
MDM34YGL219C TFC8Q12308 588 aa9.54□□□□□ -0.88
MDM34YGL219C SCY1P53009 804 aa9.51□□□□□ -0.89
MDM34YGL219C SLX5P32828 619 aaKnown RBP9.49□□□□□ -0.89
MDM34YGL219C BCH2P36122 765 aa9.18□□□□□ -0.94
MDM34YGL219C YBL029C-AQ3E756 94 aa9.09□□□□□ -0.95
MDM34YGL219C MST1P07236 462 aa8.99□□□□□ -0.97
MDM34YGL219C YOR238WQ08634 303 aa8.93□□□□□ -0.98
MDM34YGL219C RIM101P33400 625 aa8.92□□□□□ -0.98
MDM34YGL219C VNX1P42839 908 aa8.91□□□□□ -0.98
MDM34YGL219C EPS1P40557 701 aa8.87□□□□□ -0.99
MDM34YGL219C BDF1P35817 686 aa8.86□□□□□ -0.99
MDM34YGL219C SPP1Q03012 353 aa8.86□□□□□ -0.99
MDM34YGL219C YJL171CP46992 396 aa8.83□□□□□ -1
MDM34YGL219C TFA1P36100 482 aa8.82□□□□□ -1
MDM34YGL219C AIR2Q12476 344 aaKnown RBP8.79□□□□□ -1
MDM34YGL219C NSR1P27476 414 aaKnown RBP RIP-Chip data8.76□□□□□ -1.01not detected
MDM34YGL219C WSC3Q12215 556 aa8.76□□□□□ -1.01
MDM34YGL219C FKH1P40466 484 aa8.73□□□□□ -1.01
MDM34YGL219C YAP5P40574 245 aa8.7□□□□□ -1.02
MDM34YGL219C TIF11P38912 153 aaKnown RBP8.67□□□□□ -1.02
MDM34YGL219C OXP1P28273 1286 aa8.63□□□□□ -1.03
MDM34YGL219C BMT6Q12291 365 aa8.58□□□□□ -1.04
MDM34YGL219C GTT3P39996 337 aa8.57□□□□□ -1.04
MDM34YGL219C PTP3P40048 928 aa8.57□□□□□ -1.04
MDM34YGL219C LDB19Q12502 818 aa8.55□□□□□ -1.04
MDM34YGL219C BBC1P47068 1157 aa8.52□□□□□ -1.05
MDM34YGL219C YIL055CP40523 627 aaKnown RBP8.5□□□□□ -1.05
MDM34YGL219C ULI1P43604 169 aa8.48□□□□□ -1.05
MDM34YGL219C IOC2Q12072 812 aa8.45□□□□□ -1.06
MDM34YGL219C AI2P03876 854 aa8.39□□□□□ -1.07
MDM34YGL219C RSM7P47150 247 aa8.35□□□□□ -1.07
MDM34YGL219C YAH1Q12184 172 aaKnown RBP8.35□□□□□ -1.07
MDM34YGL219C PIB1Q06651 286 aa8.3□□□□□ -1.08
MDM34YGL219C EAP1P36041 632 aaKnown RBP8.29□□□□□ -1.08
MDM34YGL219C MSB4Q12317 492 aa8.29□□□□□ -1.08
MDM34YGL219C RTG1P32607 177 aa8.28□□□□□ -1.08
MDM34YGL219C NCR1Q12200 1170 aa8.24□□□□□ -1.09
MDM34YGL219C TRP5P00931 707 aaKnown RBP8.18□□□□□ -1.1
MDM34YGL219C SEC61P32915 480 aa8.16□□□□□ -1.1
MDM34YGL219C SET4P42948 560 aa8.16□□□□□ -1.1
MDM34YGL219C YOL036WQ08206 761 aa8.16□□□□□ -1.1
MDM34YGL219C YNL035CP53962 389 aaKnown RBP8.15□□□□□ -1.1
MDM34YGL219C YLR271WQ06152 274 aa8.14□□□□□ -1.11
MDM34YGL219C BCK2P33306 851 aa8.13□□□□□ -1.11
MDM34YGL219C TFG1P41895 735 aaPredicted RBP8.09□□□□□ -1.12
MDM34YGL219C PSD2P53037 1138 aaKnown RBP8.06□□□□□ -1.12
MDM34YGL219C SAP30P38429 201 aa8.03□□□□□ -1.12
MDM34YGL219C MRM1P25270 412 aa8.02□□□□□ -1.13
MDM34YGL219C CHL1P22516 861 aaPredicted RBP8.01□□□□□ -1.13
MDM34YGL219C SSP1P38871 571 aa7.99□□□□□ -1.13
MDM34YGL219C PRE3P38624 215 aa7.95□□□□□ -1.14
MDM34YGL219C YMR1P47147 688 aaKnown RBP RIP-Chip data7.95□□□□□ -1.14not detected
MDM34YGL219C YDL129WQ07555 291 aa7.94□□□□□ -1.14
MDM34YGL219C VMA1P17255 1071 aaKnown RBP7.93□□□□□ -1.14
MDM34YGL219C DBP1P24784 617 aaKnown RBP7.92□□□□□ -1.14
MDM34YGL219C DAN4P47179 1161 aa7.92□□□□□ -1.14
MDM34YGL219C JIP4Q03361 876 aa7.91□□□□□ -1.14
MDM34YGL219C SAM3Q08986 587 aa7.91□□□□□ -1.14
MDM34YGL219C YFR006WP43590 535 aa7.88□□□□□ -1.15
MDM34YGL219C RGA2Q06407 1009 aa7.86□□□□□ -1.15
MDM34YGL219C CST9Q06032 482 aa7.85□□□□□ -1.15
MDM34YGL219C VPS29P38759 282 aa7.84□□□□□ -1.15
MDM34YGL219C XDJ1P39102 459 aa7.84□□□□□ -1.15
MDM34YGL219C ARP8Q12386 881 aaKnown RBP RIP-Chip data7.84□□□□□ -1.15 RIP-Chip
MDM34YGL219C ABP1P15891 592 aaKnown RBP7.83□□□□□ -1.16
MDM34YGL219C VRP1P37370 817 aa7.82□□□□□ -1.16
MDM34YGL219C STS1P38637 319 aa7.81□□□□□ -1.16
MDM34YGL219C DPS1P04802 557 aaKnown RBP7.77□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 172.9 ms