Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SFTPBP07988 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SFTPBP07988 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.62■□□□□ 0.57
SFTPBP07988 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.62■□□□□ 0.57
SFTPBP07988 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SFTPBP07988 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.62■□□□□ 0.57
SFTPBP07988 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SFTPBP07988 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SFTPBP07988 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SFTPBP07988 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SFTPBP07988 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
SFTPBP07988 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SFTPBP07988 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
SFTPBP07988 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SFTPBP07988 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SFTPBP07988 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.61■□□□□ 0.57
SFTPBP07988 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SFTPBP07988 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.61■□□□□ 0.57
SFTPBP07988 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SFTPBP07988 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
SFTPBP07988 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.61■□□□□ 0.57
SFTPBP07988 MIR638-201ENST00000385237 100 ntBASIC18.61■□□□□ 0.57
SFTPBP07988 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SFTPBP07988 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.61■□□□□ 0.57
SFTPBP07988 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.61■□□□□ 0.57
SFTPBP07988 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.61■□□□□ 0.57
SFTPBP07988 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SFTPBP07988 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SFTPBP07988 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.6■□□□□ 0.57
SFTPBP07988 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.6■□□□□ 0.57
SFTPBP07988 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
SFTPBP07988 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SFTPBP07988 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.6■□□□□ 0.57
SFTPBP07988 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SFTPBP07988 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SFTPBP07988 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.6■□□□□ 0.57
SFTPBP07988 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.6■□□□□ 0.57
SFTPBP07988 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SFTPBP07988 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SFTPBP07988 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
SFTPBP07988 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.6■□□□□ 0.57
SFTPBP07988 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SFTPBP07988 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SFTPBP07988 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.6■□□□□ 0.57
SFTPBP07988 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
SFTPBP07988 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SFTPBP07988 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.6■□□□□ 0.57
SFTPBP07988 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
SFTPBP07988 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SFTPBP07988 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SFTPBP07988 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SFTPBP07988 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.59■□□□□ 0.57
SFTPBP07988 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
SFTPBP07988 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.59■□□□□ 0.57
SFTPBP07988 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
SFTPBP07988 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SFTPBP07988 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.59■□□□□ 0.57
SFTPBP07988 AL499627.2-201ENST00000606283 725 ntBASIC18.59■□□□□ 0.57
SFTPBP07988 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC18.59■□□□□ 0.57
SFTPBP07988 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SFTPBP07988 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.59■□□□□ 0.57
SFTPBP07988 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
SFTPBP07988 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SFTPBP07988 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SFTPBP07988 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.59■□□□□ 0.57
SFTPBP07988 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SFTPBP07988 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.58■□□□□ 0.57
SFTPBP07988 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SFTPBP07988 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
SFTPBP07988 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SFTPBP07988 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SFTPBP07988 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SFTPBP07988 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SFTPBP07988 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SFTPBP07988 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SFTPBP07988 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SFTPBP07988 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SFTPBP07988 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SFTPBP07988 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.57■□□□□ 0.56
SFTPBP07988 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SFTPBP07988 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SFTPBP07988 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.57■□□□□ 0.56
SFTPBP07988 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SFTPBP07988 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SFTPBP07988 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
SFTPBP07988 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SFTPBP07988 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.57■□□□□ 0.56
SFTPBP07988 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SFTPBP07988 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SFTPBP07988 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SFTPBP07988 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.56■□□□□ 0.56
SFTPBP07988 UNC93B3-201ENST00000308076 687 ntBASIC18.56■□□□□ 0.56
SFTPBP07988 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.56■□□□□ 0.56
SFTPBP07988 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SFTPBP07988 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.56■□□□□ 0.56
SFTPBP07988 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SFTPBP07988 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SFTPBP07988 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
SFTPBP07988 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.56■□□□□ 0.56
SFTPBP07988 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms