Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
BLOC1S4Q9NUP1 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
BLOC1S4Q9NUP1 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
BLOC1S4Q9NUP1 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
BLOC1S4Q9NUP1 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC24.16■■□□□ 1.46
BLOC1S4Q9NUP1 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
BLOC1S4Q9NUP1 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC24.16■■□□□ 1.46
BLOC1S4Q9NUP1 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
BLOC1S4Q9NUP1 AC005837.3-201ENST00000612163 286 ntBASIC24.16■■□□□ 1.46
BLOC1S4Q9NUP1 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
BLOC1S4Q9NUP1 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
BLOC1S4Q9NUP1 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
BLOC1S4Q9NUP1 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
BLOC1S4Q9NUP1 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC24.16■■□□□ 1.46
BLOC1S4Q9NUP1 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC24.16■■□□□ 1.46
BLOC1S4Q9NUP1 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
BLOC1S4Q9NUP1 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC24.15■■□□□ 1.46
BLOC1S4Q9NUP1 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
BLOC1S4Q9NUP1 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
BLOC1S4Q9NUP1 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
BLOC1S4Q9NUP1 GRAMD4P2-201ENST00000423297 1097 ntBASIC24.15■■□□□ 1.46
BLOC1S4Q9NUP1 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC24.15■■□□□ 1.46
BLOC1S4Q9NUP1 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC24.15■■□□□ 1.46
BLOC1S4Q9NUP1 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC24.15■■□□□ 1.46
BLOC1S4Q9NUP1 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
BLOC1S4Q9NUP1 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
BLOC1S4Q9NUP1 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
BLOC1S4Q9NUP1 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
BLOC1S4Q9NUP1 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
BLOC1S4Q9NUP1 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
BLOC1S4Q9NUP1 TSPY26P-201ENST00000476365 1326 ntBASIC24.14■■□□□ 1.46
BLOC1S4Q9NUP1 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
BLOC1S4Q9NUP1 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC24.14■■□□□ 1.46
BLOC1S4Q9NUP1 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC24.14■■□□□ 1.45
BLOC1S4Q9NUP1 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
BLOC1S4Q9NUP1 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC24.14■■□□□ 1.45
BLOC1S4Q9NUP1 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
BLOC1S4Q9NUP1 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
BLOC1S4Q9NUP1 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC24.13■■□□□ 1.45
BLOC1S4Q9NUP1 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
BLOC1S4Q9NUP1 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
BLOC1S4Q9NUP1 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
BLOC1S4Q9NUP1 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
BLOC1S4Q9NUP1 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
BLOC1S4Q9NUP1 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
BLOC1S4Q9NUP1 MTURN-203ENST00000409688 843 ntTSL 2 BASIC24.13■■□□□ 1.45
BLOC1S4Q9NUP1 SMUG1P1-201ENST00000590640 811 ntBASIC24.13■■□□□ 1.45
BLOC1S4Q9NUP1 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
BLOC1S4Q9NUP1 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
BLOC1S4Q9NUP1 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
BLOC1S4Q9NUP1 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
BLOC1S4Q9NUP1 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC24.13■■□□□ 1.45
BLOC1S4Q9NUP1 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
BLOC1S4Q9NUP1 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
BLOC1S4Q9NUP1 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC24.12■■□□□ 1.45
BLOC1S4Q9NUP1 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC24.12■■□□□ 1.45
BLOC1S4Q9NUP1 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
BLOC1S4Q9NUP1 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC24.12■■□□□ 1.45
BLOC1S4Q9NUP1 AICDA-202ENST00000537228 667 ntTSL 5 BASIC24.12■■□□□ 1.45
BLOC1S4Q9NUP1 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC24.12■■□□□ 1.45
BLOC1S4Q9NUP1 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
BLOC1S4Q9NUP1 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC24.12■■□□□ 1.45
BLOC1S4Q9NUP1 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC24.12■■□□□ 1.45
BLOC1S4Q9NUP1 FAM99A-202ENST00000538190 1989 ntBASIC24.12■■□□□ 1.45
BLOC1S4Q9NUP1 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
BLOC1S4Q9NUP1 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
BLOC1S4Q9NUP1 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC24.11■■□□□ 1.45
BLOC1S4Q9NUP1 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
BLOC1S4Q9NUP1 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC24.11■■□□□ 1.45
BLOC1S4Q9NUP1 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
BLOC1S4Q9NUP1 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
BLOC1S4Q9NUP1 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC24.1■■□□□ 1.45
BLOC1S4Q9NUP1 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
BLOC1S4Q9NUP1 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
BLOC1S4Q9NUP1 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
BLOC1S4Q9NUP1 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC24.1■■□□□ 1.45
BLOC1S4Q9NUP1 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC24.1■■□□□ 1.45
BLOC1S4Q9NUP1 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC24.1■■□□□ 1.45
BLOC1S4Q9NUP1 AC142381.2-201ENST00000566120 298 ntBASIC24.1■■□□□ 1.45
BLOC1S4Q9NUP1 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC24.1■■□□□ 1.45
BLOC1S4Q9NUP1 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
BLOC1S4Q9NUP1 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC24.1■■□□□ 1.45
BLOC1S4Q9NUP1 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
BLOC1S4Q9NUP1 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
BLOC1S4Q9NUP1 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
BLOC1S4Q9NUP1 AC026471.6-201ENST00000622954 1905 ntBASIC24.1■■□□□ 1.45
BLOC1S4Q9NUP1 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
BLOC1S4Q9NUP1 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC24.09■■□□□ 1.45
BLOC1S4Q9NUP1 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
BLOC1S4Q9NUP1 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
BLOC1S4Q9NUP1 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
BLOC1S4Q9NUP1 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC24.09■■□□□ 1.45
BLOC1S4Q9NUP1 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
BLOC1S4Q9NUP1 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
BLOC1S4Q9NUP1 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
BLOC1S4Q9NUP1 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC24.09■■□□□ 1.45
BLOC1S4Q9NUP1 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
BLOC1S4Q9NUP1 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC24.09■■□□□ 1.45
BLOC1S4Q9NUP1 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
BLOC1S4Q9NUP1 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC24.09■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms