Protein–RNA interactions for Protein: Q9H9S0

NANOG, Homeobox protein NANOG, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGQ9H9S0 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NANOGQ9H9S0 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NANOGQ9H9S0 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NANOGQ9H9S0 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.48■□□□□ 0.87
NANOGQ9H9S0 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NANOGQ9H9S0 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NANOGQ9H9S0 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
NANOGQ9H9S0 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.48■□□□□ 0.87
NANOGQ9H9S0 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NANOGQ9H9S0 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NANOGQ9H9S0 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
NANOGQ9H9S0 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NANOGQ9H9S0 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NANOGQ9H9S0 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.47■□□□□ 0.87
NANOGQ9H9S0 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
NANOGQ9H9S0 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.47■□□□□ 0.87
NANOGQ9H9S0 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NANOGQ9H9S0 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NANOGQ9H9S0 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
NANOGQ9H9S0 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NANOGQ9H9S0 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
NANOGQ9H9S0 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NANOGQ9H9S0 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.47■□□□□ 0.87
NANOGQ9H9S0 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
NANOGQ9H9S0 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.46■□□□□ 0.87
NANOGQ9H9S0 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
NANOGQ9H9S0 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
NANOGQ9H9S0 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
NANOGQ9H9S0 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NANOGQ9H9S0 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
NANOGQ9H9S0 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.46■□□□□ 0.87
NANOGQ9H9S0 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NANOGQ9H9S0 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.46■□□□□ 0.87
NANOGQ9H9S0 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.46■□□□□ 0.87
NANOGQ9H9S0 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NANOGQ9H9S0 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NANOGQ9H9S0 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NANOGQ9H9S0 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NANOGQ9H9S0 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NANOGQ9H9S0 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NANOGQ9H9S0 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
NANOGQ9H9S0 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.87
NANOGQ9H9S0 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.45■□□□□ 0.86
NANOGQ9H9S0 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NANOGQ9H9S0 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NANOGQ9H9S0 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NANOGQ9H9S0 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NANOGQ9H9S0 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.45■□□□□ 0.86
NANOGQ9H9S0 AL499627.2-201ENST00000606283 725 ntBASIC20.45■□□□□ 0.86
NANOGQ9H9S0 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NANOGQ9H9S0 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NANOGQ9H9S0 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.45■□□□□ 0.86
NANOGQ9H9S0 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
NANOGQ9H9S0 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NANOGQ9H9S0 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.44■□□□□ 0.86
NANOGQ9H9S0 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
NANOGQ9H9S0 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NANOGQ9H9S0 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NANOGQ9H9S0 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
NANOGQ9H9S0 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.44■□□□□ 0.86
NANOGQ9H9S0 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
NANOGQ9H9S0 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
NANOGQ9H9S0 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NANOGQ9H9S0 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NANOGQ9H9S0 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NANOGQ9H9S0 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NANOGQ9H9S0 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
NANOGQ9H9S0 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
NANOGQ9H9S0 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
NANOGQ9H9S0 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.43■□□□□ 0.86
NANOGQ9H9S0 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.43■□□□□ 0.86
NANOGQ9H9S0 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
NANOGQ9H9S0 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
NANOGQ9H9S0 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NANOGQ9H9S0 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.43■□□□□ 0.86
NANOGQ9H9S0 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.43■□□□□ 0.86
NANOGQ9H9S0 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NANOGQ9H9S0 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NANOGQ9H9S0 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NANOGQ9H9S0 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NANOGQ9H9S0 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NANOGQ9H9S0 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NANOGQ9H9S0 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
NANOGQ9H9S0 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NANOGQ9H9S0 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
NANOGQ9H9S0 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
NANOGQ9H9S0 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NANOGQ9H9S0 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NANOGQ9H9S0 AC026471.6-201ENST00000622954 1905 ntBASIC20.42■□□□□ 0.86
NANOGQ9H9S0 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
NANOGQ9H9S0 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NANOGQ9H9S0 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NANOGQ9H9S0 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NANOGQ9H9S0 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NANOGQ9H9S0 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
NANOGQ9H9S0 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
NANOGQ9H9S0 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
NANOGQ9H9S0 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NANOGQ9H9S0 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NANOGQ9H9S0 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms