Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRBV5-3A0A0A0MS03 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRBV5-3A0A0A0MS03 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.32■□□□□ 0.84
TRBV5-3A0A0A0MS03 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRBV5-3A0A0A0MS03 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRBV5-3A0A0A0MS03 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.32■□□□□ 0.84
TRBV5-3A0A0A0MS03 AF106564.1-201ENST00000607058 2553 ntBASIC20.32■□□□□ 0.84
TRBV5-3A0A0A0MS03 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.31■□□□□ 0.84
TRBV5-3A0A0A0MS03 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
TRBV5-3A0A0A0MS03 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRBV5-3A0A0A0MS03 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRBV5-3A0A0A0MS03 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRBV5-3A0A0A0MS03 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
TRBV5-3A0A0A0MS03 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRBV5-3A0A0A0MS03 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRBV5-3A0A0A0MS03 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
TRBV5-3A0A0A0MS03 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRBV5-3A0A0A0MS03 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRBV5-3A0A0A0MS03 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRBV5-3A0A0A0MS03 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRBV5-3A0A0A0MS03 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.3■□□□□ 0.84
TRBV5-3A0A0A0MS03 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
TRBV5-3A0A0A0MS03 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.3■□□□□ 0.84
TRBV5-3A0A0A0MS03 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRBV5-3A0A0A0MS03 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
TRBV5-3A0A0A0MS03 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRBV5-3A0A0A0MS03 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRBV5-3A0A0A0MS03 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRBV5-3A0A0A0MS03 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
TRBV5-3A0A0A0MS03 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
TRBV5-3A0A0A0MS03 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.3■□□□□ 0.84
TRBV5-3A0A0A0MS03 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.3■□□□□ 0.84
TRBV5-3A0A0A0MS03 pRNA.6-201ENST00000610482 90 ntBASIC20.3■□□□□ 0.84
TRBV5-3A0A0A0MS03 pRNA.5-201ENST00000612139 90 ntBASIC20.3■□□□□ 0.84
TRBV5-3A0A0A0MS03 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRBV5-3A0A0A0MS03 pRNA.11-201ENST00000618423 90 ntBASIC20.3■□□□□ 0.84
TRBV5-3A0A0A0MS03 pRNA.13-201ENST00000619112 90 ntBASIC20.3■□□□□ 0.84
TRBV5-3A0A0A0MS03 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRBV5-3A0A0A0MS03 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
TRBV5-3A0A0A0MS03 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRBV5-3A0A0A0MS03 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRBV5-3A0A0A0MS03 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRBV5-3A0A0A0MS03 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRBV5-3A0A0A0MS03 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRBV5-3A0A0A0MS03 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRBV5-3A0A0A0MS03 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.29■□□□□ 0.84
TRBV5-3A0A0A0MS03 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
TRBV5-3A0A0A0MS03 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.29■□□□□ 0.84
TRBV5-3A0A0A0MS03 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRBV5-3A0A0A0MS03 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRBV5-3A0A0A0MS03 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.29■□□□□ 0.84
TRBV5-3A0A0A0MS03 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
TRBV5-3A0A0A0MS03 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRBV5-3A0A0A0MS03 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.29■□□□□ 0.84
TRBV5-3A0A0A0MS03 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
TRBV5-3A0A0A0MS03 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRBV5-3A0A0A0MS03 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.29■□□□□ 0.84
TRBV5-3A0A0A0MS03 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRBV5-3A0A0A0MS03 OR7E47P-201ENST00000546390 1422 ntBASIC20.28■□□□□ 0.84
TRBV5-3A0A0A0MS03 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRBV5-3A0A0A0MS03 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRBV5-3A0A0A0MS03 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.28■□□□□ 0.84
TRBV5-3A0A0A0MS03 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRBV5-3A0A0A0MS03 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRBV5-3A0A0A0MS03 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRBV5-3A0A0A0MS03 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.28■□□□□ 0.84
TRBV5-3A0A0A0MS03 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.28■□□□□ 0.84
TRBV5-3A0A0A0MS03 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.28■□□□□ 0.84
TRBV5-3A0A0A0MS03 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.28■□□□□ 0.84
TRBV5-3A0A0A0MS03 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRBV5-3A0A0A0MS03 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
TRBV5-3A0A0A0MS03 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRBV5-3A0A0A0MS03 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.27■□□□□ 0.84
TRBV5-3A0A0A0MS03 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRBV5-3A0A0A0MS03 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRBV5-3A0A0A0MS03 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.27■□□□□ 0.84
TRBV5-3A0A0A0MS03 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRBV5-3A0A0A0MS03 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
TRBV5-3A0A0A0MS03 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.27■□□□□ 0.84
TRBV5-3A0A0A0MS03 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRBV5-3A0A0A0MS03 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.27■□□□□ 0.84
TRBV5-3A0A0A0MS03 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.27■□□□□ 0.83
TRBV5-3A0A0A0MS03 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TRBV5-3A0A0A0MS03 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TRBV5-3A0A0A0MS03 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.27■□□□□ 0.83
TRBV5-3A0A0A0MS03 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
TRBV5-3A0A0A0MS03 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRBV5-3A0A0A0MS03 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.26■□□□□ 0.83
TRBV5-3A0A0A0MS03 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRBV5-3A0A0A0MS03 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRBV5-3A0A0A0MS03 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.26■□□□□ 0.83
TRBV5-3A0A0A0MS03 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRBV5-3A0A0A0MS03 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.26■□□□□ 0.83
TRBV5-3A0A0A0MS03 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRBV5-3A0A0A0MS03 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRBV5-3A0A0A0MS03 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRBV5-3A0A0A0MS03 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.26■□□□□ 0.83
TRBV5-3A0A0A0MS03 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRBV5-3A0A0A0MS03 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.25■□□□□ 0.83
TRBV5-3A0A0A0MS03 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms