Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
LCA10Q71F78 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LCA10Q71F78 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LCA10Q71F78 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LCA10Q71F78 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LCA10Q71F78 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC14.5□□□□□ -0.09
LCA10Q71F78 ABCB10P1-201ENST00000614297 2181 ntBASIC14.5□□□□□ -0.09
LCA10Q71F78 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LCA10Q71F78 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
LCA10Q71F78 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LCA10Q71F78 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LCA10Q71F78 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LCA10Q71F78 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LCA10Q71F78 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
LCA10Q71F78 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LCA10Q71F78 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LCA10Q71F78 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
LCA10Q71F78 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
LCA10Q71F78 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LCA10Q71F78 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LCA10Q71F78 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC14.46□□□□□ -0.09
LCA10Q71F78 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LCA10Q71F78 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
LCA10Q71F78 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
LCA10Q71F78 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
LCA10Q71F78 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LCA10Q71F78 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LCA10Q71F78 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LCA10Q71F78 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LCA10Q71F78 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LCA10Q71F78 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LCA10Q71F78 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC14.44□□□□□ -0.1
LCA10Q71F78 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
LCA10Q71F78 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LCA10Q71F78 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LCA10Q71F78 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
LCA10Q71F78 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LCA10Q71F78 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LCA10Q71F78 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LCA10Q71F78 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
LCA10Q71F78 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LCA10Q71F78 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
LCA10Q71F78 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LCA10Q71F78 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
LCA10Q71F78 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LCA10Q71F78 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LCA10Q71F78 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LCA10Q71F78 SHF-207ENST00000560540 2062 ntTSL 5 BASIC14.39□□□□□ -0.11
LCA10Q71F78 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LCA10Q71F78 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC14.39□□□□□ -0.11
LCA10Q71F78 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
LCA10Q71F78 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LCA10Q71F78 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
LCA10Q71F78 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LCA10Q71F78 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LCA10Q71F78 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LCA10Q71F78 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LCA10Q71F78 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LCA10Q71F78 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LCA10Q71F78 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC14.37□□□□□ -0.11
LCA10Q71F78 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LCA10Q71F78 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
LCA10Q71F78 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC14.35□□□□□ -0.11
LCA10Q71F78 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
LCA10Q71F78 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LCA10Q71F78 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC14.34□□□□□ -0.11
LCA10Q71F78 AC145285.7-201ENST00000614819 1539 ntBASIC14.34□□□□□ -0.11
LCA10Q71F78 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC14.34□□□□□ -0.11
LCA10Q71F78 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LCA10Q71F78 LTK-203ENST00000453182 2412 ntTSL 2 BASIC14.33□□□□□ -0.12
LCA10Q71F78 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LCA10Q71F78 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LCA10Q71F78 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LCA10Q71F78 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LCA10Q71F78 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
LCA10Q71F78 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
LCA10Q71F78 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC14.32□□□□□ -0.12
LCA10Q71F78 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
LCA10Q71F78 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
LCA10Q71F78 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LCA10Q71F78 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LCA10Q71F78 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LCA10Q71F78 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC14.31□□□□□ -0.12
LCA10Q71F78 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LCA10Q71F78 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LCA10Q71F78 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LCA10Q71F78 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC14.3□□□□□ -0.12
LCA10Q71F78 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LCA10Q71F78 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC14.29□□□□□ -0.12
LCA10Q71F78 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC14.29□□□□□ -0.12
LCA10Q71F78 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LCA10Q71F78 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC14.29□□□□□ -0.12
LCA10Q71F78 PKM-203ENST00000389093 2279 ntTSL 5 BASIC14.28□□□□□ -0.12
LCA10Q71F78 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LCA10Q71F78 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LCA10Q71F78 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
LCA10Q71F78 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LCA10Q71F78 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LCA10Q71F78 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC14.27□□□□□ -0.13
LCA10Q71F78 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms