Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
KRTAP4-1Q9BYQ7 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
KRTAP4-1Q9BYQ7 KRT87P-202ENST00000534226 1464 ntBASIC11.39□□□□□ -0.59
KRTAP4-1Q9BYQ7 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
KRTAP4-1Q9BYQ7 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC11.39□□□□□ -0.59
KRTAP4-1Q9BYQ7 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC11.39□□□□□ -0.59
KRTAP4-1Q9BYQ7 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC11.39□□□□□ -0.59
KRTAP4-1Q9BYQ7 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
KRTAP4-1Q9BYQ7 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
KRTAP4-1Q9BYQ7 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC11.39□□□□□ -0.59
KRTAP4-1Q9BYQ7 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
KRTAP4-1Q9BYQ7 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC11.39□□□□□ -0.59
KRTAP4-1Q9BYQ7 BRI3-207ENST00000539286 699 ntTSL 2 BASIC11.39□□□□□ -0.59
KRTAP4-1Q9BYQ7 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC11.39□□□□□ -0.59
KRTAP4-1Q9BYQ7 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC11.39□□□□□ -0.59
KRTAP4-1Q9BYQ7 PARP1-210ENST00000629232 477 ntTSL 5 BASIC11.39□□□□□ -0.59
KRTAP4-1Q9BYQ7 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
KRTAP4-1Q9BYQ7 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC11.39□□□□□ -0.59
KRTAP4-1Q9BYQ7 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
KRTAP4-1Q9BYQ7 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
KRTAP4-1Q9BYQ7 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
KRTAP4-1Q9BYQ7 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
KRTAP4-1Q9BYQ7 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
KRTAP4-1Q9BYQ7 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
KRTAP4-1Q9BYQ7 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC11.38□□□□□ -0.59
KRTAP4-1Q9BYQ7 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC11.38□□□□□ -0.59
KRTAP4-1Q9BYQ7 AL139125.2-201ENST00000623134 1869 ntBASIC11.38□□□□□ -0.59
KRTAP4-1Q9BYQ7 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
KRTAP4-1Q9BYQ7 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
KRTAP4-1Q9BYQ7 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
KRTAP4-1Q9BYQ7 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC11.38□□□□□ -0.59
KRTAP4-1Q9BYQ7 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
KRTAP4-1Q9BYQ7 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC11.38□□□□□ -0.59
KRTAP4-1Q9BYQ7 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
KRTAP4-1Q9BYQ7 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC11.38□□□□□ -0.59
KRTAP4-1Q9BYQ7 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
KRTAP4-1Q9BYQ7 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC11.38□□□□□ -0.59
KRTAP4-1Q9BYQ7 AP001160.3-201ENST00000601484 763 ntBASIC11.38□□□□□ -0.59
KRTAP4-1Q9BYQ7 AC231657.2-201ENST00000624556 255 ntBASIC11.38□□□□□ -0.59
KRTAP4-1Q9BYQ7 MYCNOS-205ENST00000641950 531 ntBASIC11.38□□□□□ -0.59
KRTAP4-1Q9BYQ7 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
KRTAP4-1Q9BYQ7 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC11.38□□□□□ -0.59
KRTAP4-1Q9BYQ7 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
KRTAP4-1Q9BYQ7 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
KRTAP4-1Q9BYQ7 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
KRTAP4-1Q9BYQ7 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
KRTAP4-1Q9BYQ7 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC11.37□□□□□ -0.59
KRTAP4-1Q9BYQ7 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
KRTAP4-1Q9BYQ7 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
KRTAP4-1Q9BYQ7 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC11.37□□□□□ -0.59
KRTAP4-1Q9BYQ7 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC11.37□□□□□ -0.59
KRTAP4-1Q9BYQ7 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC11.37□□□□□ -0.59
KRTAP4-1Q9BYQ7 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC11.37□□□□□ -0.59
KRTAP4-1Q9BYQ7 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
KRTAP4-1Q9BYQ7 AC008687.6-201ENST00000596318 630 ntBASIC11.37□□□□□ -0.59
KRTAP4-1Q9BYQ7 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
KRTAP4-1Q9BYQ7 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
KRTAP4-1Q9BYQ7 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC11.37□□□□□ -0.59
KRTAP4-1Q9BYQ7 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC11.37□□□□□ -0.59
KRTAP4-1Q9BYQ7 AC055733.4-201ENST00000638462 1354 ntBASIC11.37□□□□□ -0.59
KRTAP4-1Q9BYQ7 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
KRTAP4-1Q9BYQ7 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
KRTAP4-1Q9BYQ7 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
KRTAP4-1Q9BYQ7 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
KRTAP4-1Q9BYQ7 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
KRTAP4-1Q9BYQ7 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
KRTAP4-1Q9BYQ7 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
KRTAP4-1Q9BYQ7 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
KRTAP4-1Q9BYQ7 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
KRTAP4-1Q9BYQ7 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
KRTAP4-1Q9BYQ7 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
KRTAP4-1Q9BYQ7 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
KRTAP4-1Q9BYQ7 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
KRTAP4-1Q9BYQ7 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
KRTAP4-1Q9BYQ7 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC11.36□□□□□ -0.59
KRTAP4-1Q9BYQ7 APTR-203ENST00000430801 583 ntTSL 5 BASIC11.36□□□□□ -0.59
KRTAP4-1Q9BYQ7 SERP1-208ENST00000491660 830 ntTSL 2 BASIC11.36□□□□□ -0.59
KRTAP4-1Q9BYQ7 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC11.36□□□□□ -0.59
KRTAP4-1Q9BYQ7 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
KRTAP4-1Q9BYQ7 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
KRTAP4-1Q9BYQ7 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
KRTAP4-1Q9BYQ7 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
KRTAP4-1Q9BYQ7 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC11.36□□□□□ -0.59
KRTAP4-1Q9BYQ7 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC11.36□□□□□ -0.59
KRTAP4-1Q9BYQ7 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
KRTAP4-1Q9BYQ7 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
KRTAP4-1Q9BYQ7 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
KRTAP4-1Q9BYQ7 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
KRTAP4-1Q9BYQ7 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
KRTAP4-1Q9BYQ7 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
KRTAP4-1Q9BYQ7 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
KRTAP4-1Q9BYQ7 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
KRTAP4-1Q9BYQ7 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
KRTAP4-1Q9BYQ7 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
KRTAP4-1Q9BYQ7 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
KRTAP4-1Q9BYQ7 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC11.35□□□□□ -0.59
KRTAP4-1Q9BYQ7 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
KRTAP4-1Q9BYQ7 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC11.35□□□□□ -0.59
KRTAP4-1Q9BYQ7 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
KRTAP4-1Q9BYQ7 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms