Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
YIPF4Q9BSR8 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
YIPF4Q9BSR8 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
YIPF4Q9BSR8 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
YIPF4Q9BSR8 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
YIPF4Q9BSR8 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.36■□□□□ 0.85
YIPF4Q9BSR8 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
YIPF4Q9BSR8 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
YIPF4Q9BSR8 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.36■□□□□ 0.85
YIPF4Q9BSR8 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
YIPF4Q9BSR8 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
YIPF4Q9BSR8 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
YIPF4Q9BSR8 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.35■□□□□ 0.85
YIPF4Q9BSR8 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
YIPF4Q9BSR8 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
YIPF4Q9BSR8 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
YIPF4Q9BSR8 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
YIPF4Q9BSR8 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
YIPF4Q9BSR8 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
YIPF4Q9BSR8 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.35■□□□□ 0.85
YIPF4Q9BSR8 AC110285.6-201ENST00000617652 491 ntBASIC20.35■□□□□ 0.85
YIPF4Q9BSR8 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
YIPF4Q9BSR8 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
YIPF4Q9BSR8 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
YIPF4Q9BSR8 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
YIPF4Q9BSR8 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.35■□□□□ 0.85
YIPF4Q9BSR8 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.35■□□□□ 0.85
YIPF4Q9BSR8 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
YIPF4Q9BSR8 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
YIPF4Q9BSR8 C11orf96-202ENST00000528572 1834 ntBASIC20.34■□□□□ 0.85
YIPF4Q9BSR8 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
YIPF4Q9BSR8 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
YIPF4Q9BSR8 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
YIPF4Q9BSR8 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
YIPF4Q9BSR8 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
YIPF4Q9BSR8 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
YIPF4Q9BSR8 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.34■□□□□ 0.85
YIPF4Q9BSR8 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.34■□□□□ 0.85
YIPF4Q9BSR8 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.34■□□□□ 0.85
YIPF4Q9BSR8 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
YIPF4Q9BSR8 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
YIPF4Q9BSR8 AC010525.1-201ENST00000585559 441 ntBASIC20.34■□□□□ 0.85
YIPF4Q9BSR8 CA15P2-201ENST00000611168 834 ntBASIC20.34■□□□□ 0.85
YIPF4Q9BSR8 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
YIPF4Q9BSR8 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
YIPF4Q9BSR8 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
YIPF4Q9BSR8 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
YIPF4Q9BSR8 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
YIPF4Q9BSR8 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.34■□□□□ 0.85
YIPF4Q9BSR8 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.34■□□□□ 0.85
YIPF4Q9BSR8 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
YIPF4Q9BSR8 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
YIPF4Q9BSR8 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
YIPF4Q9BSR8 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.33■□□□□ 0.85
YIPF4Q9BSR8 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
YIPF4Q9BSR8 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.33■□□□□ 0.85
YIPF4Q9BSR8 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
YIPF4Q9BSR8 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
YIPF4Q9BSR8 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
YIPF4Q9BSR8 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.33■□□□□ 0.85
YIPF4Q9BSR8 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.33■□□□□ 0.85
YIPF4Q9BSR8 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.33■□□□□ 0.85
YIPF4Q9BSR8 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
YIPF4Q9BSR8 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
YIPF4Q9BSR8 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.33■□□□□ 0.84
YIPF4Q9BSR8 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
YIPF4Q9BSR8 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
YIPF4Q9BSR8 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.32■□□□□ 0.84
YIPF4Q9BSR8 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
YIPF4Q9BSR8 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
YIPF4Q9BSR8 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
YIPF4Q9BSR8 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.32■□□□□ 0.84
YIPF4Q9BSR8 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
YIPF4Q9BSR8 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
YIPF4Q9BSR8 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
YIPF4Q9BSR8 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
YIPF4Q9BSR8 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
YIPF4Q9BSR8 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
YIPF4Q9BSR8 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
YIPF4Q9BSR8 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
YIPF4Q9BSR8 DUX4L19-201ENST00000557448 1267 ntBASIC20.31■□□□□ 0.84
YIPF4Q9BSR8 AC005837.3-201ENST00000612163 286 ntBASIC20.31■□□□□ 0.84
YIPF4Q9BSR8 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.31■□□□□ 0.84
YIPF4Q9BSR8 AL031602.1-201ENST00000633169 911 ntBASIC20.31■□□□□ 0.84
YIPF4Q9BSR8 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.31■□□□□ 0.84
YIPF4Q9BSR8 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
YIPF4Q9BSR8 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.31■□□□□ 0.84
YIPF4Q9BSR8 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.31■□□□□ 0.84
YIPF4Q9BSR8 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.31■□□□□ 0.84
YIPF4Q9BSR8 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
YIPF4Q9BSR8 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
YIPF4Q9BSR8 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
YIPF4Q9BSR8 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.3■□□□□ 0.84
YIPF4Q9BSR8 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.3■□□□□ 0.84
YIPF4Q9BSR8 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
YIPF4Q9BSR8 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
YIPF4Q9BSR8 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
YIPF4Q9BSR8 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
YIPF4Q9BSR8 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
YIPF4Q9BSR8 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms