Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNAI3Q3KNW1 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.84■□□□□ 0.61
SNAI3Q3KNW1 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SNAI3Q3KNW1 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNAI3Q3KNW1 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.83■□□□□ 0.61
SNAI3Q3KNW1 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.83■□□□□ 0.61
SNAI3Q3KNW1 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
SNAI3Q3KNW1 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SNAI3Q3KNW1 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SNAI3Q3KNW1 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SNAI3Q3KNW1 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SNAI3Q3KNW1 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
SNAI3Q3KNW1 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SNAI3Q3KNW1 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.83■□□□□ 0.6
SNAI3Q3KNW1 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
SNAI3Q3KNW1 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.83■□□□□ 0.6
SNAI3Q3KNW1 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SNAI3Q3KNW1 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNAI3Q3KNW1 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNAI3Q3KNW1 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNAI3Q3KNW1 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNAI3Q3KNW1 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SNAI3Q3KNW1 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
SNAI3Q3KNW1 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNAI3Q3KNW1 SLC47A1P1-202ENST00000449666 945 ntBASIC18.82■□□□□ 0.6
SNAI3Q3KNW1 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SNAI3Q3KNW1 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.82■□□□□ 0.6
SNAI3Q3KNW1 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SNAI3Q3KNW1 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SNAI3Q3KNW1 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNAI3Q3KNW1 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SNAI3Q3KNW1 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNAI3Q3KNW1 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.81■□□□□ 0.6
SNAI3Q3KNW1 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNAI3Q3KNW1 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNAI3Q3KNW1 UNC93B3-201ENST00000308076 687 ntBASIC18.81■□□□□ 0.6
SNAI3Q3KNW1 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.81■□□□□ 0.6
SNAI3Q3KNW1 AC068587.7-201ENST00000641602 218 ntBASIC18.81■□□□□ 0.6
SNAI3Q3KNW1 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.81■□□□□ 0.6
SNAI3Q3KNW1 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SNAI3Q3KNW1 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNAI3Q3KNW1 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SNAI3Q3KNW1 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNAI3Q3KNW1 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
SNAI3Q3KNW1 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNAI3Q3KNW1 AC008406.3-201ENST00000620001 1374 ntBASIC18.81■□□□□ 0.6
SNAI3Q3KNW1 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNAI3Q3KNW1 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
SNAI3Q3KNW1 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SNAI3Q3KNW1 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNAI3Q3KNW1 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNAI3Q3KNW1 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.8■□□□□ 0.6
SNAI3Q3KNW1 AC079089.2-201ENST00000531211 1277 ntBASIC18.8■□□□□ 0.6
SNAI3Q3KNW1 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SNAI3Q3KNW1 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SNAI3Q3KNW1 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SNAI3Q3KNW1 FBXW4P1-201ENST00000426721 2239 ntBASIC18.8■□□□□ 0.6
SNAI3Q3KNW1 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.79■□□□□ 0.6
SNAI3Q3KNW1 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SNAI3Q3KNW1 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SNAI3Q3KNW1 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SNAI3Q3KNW1 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SNAI3Q3KNW1 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.79■□□□□ 0.6
SNAI3Q3KNW1 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SNAI3Q3KNW1 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.79■□□□□ 0.6
SNAI3Q3KNW1 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNAI3Q3KNW1 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNAI3Q3KNW1 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.79■□□□□ 0.6
SNAI3Q3KNW1 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SNAI3Q3KNW1 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNAI3Q3KNW1 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.78■□□□□ 0.6
SNAI3Q3KNW1 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNAI3Q3KNW1 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SNAI3Q3KNW1 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
SNAI3Q3KNW1 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNAI3Q3KNW1 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SNAI3Q3KNW1 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SNAI3Q3KNW1 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNAI3Q3KNW1 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SNAI3Q3KNW1 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.78■□□□□ 0.6
SNAI3Q3KNW1 MIR4767-201ENST00000582827 78 ntBASIC18.78■□□□□ 0.6
SNAI3Q3KNW1 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.78■□□□□ 0.6
SNAI3Q3KNW1 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNAI3Q3KNW1 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNAI3Q3KNW1 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.78■□□□□ 0.6
SNAI3Q3KNW1 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNAI3Q3KNW1 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNAI3Q3KNW1 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNAI3Q3KNW1 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SNAI3Q3KNW1 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SNAI3Q3KNW1 CLDN5-201ENST00000403084 2357 ntBASIC18.77■□□□□ 0.6
SNAI3Q3KNW1 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNAI3Q3KNW1 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNAI3Q3KNW1 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.77■□□□□ 0.6
SNAI3Q3KNW1 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SNAI3Q3KNW1 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.77■□□□□ 0.6
SNAI3Q3KNW1 AC087239.1-201ENST00000622671 572 ntBASIC18.77■□□□□ 0.6
SNAI3Q3KNW1 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNAI3Q3KNW1 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.77■□□□□ 0.59
SNAI3Q3KNW1 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 170.2 ms