Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.75■■□□□ 1.07
LDB2O43679 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LDB2O43679 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
LDB2O43679 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LDB2O43679 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
LDB2O43679 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LDB2O43679 LINC00565-201ENST00000562710 2331 ntBASIC21.75■■□□□ 1.07
LDB2O43679 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LDB2O43679 OXCT2P1-201ENST00000447263 1535 ntBASIC21.75■■□□□ 1.07
LDB2O43679 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LDB2O43679 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LDB2O43679 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LDB2O43679 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LDB2O43679 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LDB2O43679 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LDB2O43679 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LDB2O43679 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.74■■□□□ 1.07
LDB2O43679 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.74■■□□□ 1.07
LDB2O43679 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LDB2O43679 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.74■■□□□ 1.07
LDB2O43679 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LDB2O43679 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LDB2O43679 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
LDB2O43679 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LDB2O43679 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
LDB2O43679 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LDB2O43679 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.73■■□□□ 1.07
LDB2O43679 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LDB2O43679 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.73■■□□□ 1.07
LDB2O43679 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LDB2O43679 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
LDB2O43679 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.73■■□□□ 1.07
LDB2O43679 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LDB2O43679 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.73■■□□□ 1.07
LDB2O43679 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.73■■□□□ 1.07
LDB2O43679 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LDB2O43679 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LDB2O43679 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
LDB2O43679 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.72■■□□□ 1.07
LDB2O43679 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LDB2O43679 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
LDB2O43679 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.72■■□□□ 1.07
LDB2O43679 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
LDB2O43679 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LDB2O43679 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LDB2O43679 EDA-201ENST00000338901 1233 ntBASIC21.72■■□□□ 1.07
LDB2O43679 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
LDB2O43679 AC133561.4-201ENST00000566112 224 ntBASIC21.72■■□□□ 1.07
LDB2O43679 AL139246.5-201ENST00000606645 996 ntBASIC21.72■■□□□ 1.07
LDB2O43679 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.72■■□□□ 1.07
LDB2O43679 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
LDB2O43679 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LDB2O43679 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LDB2O43679 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LDB2O43679 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.71■■□□□ 1.07
LDB2O43679 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LDB2O43679 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LDB2O43679 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.71■■□□□ 1.07
LDB2O43679 AC008764.7-201ENST00000593779 1081 ntBASIC21.71■■□□□ 1.07
LDB2O43679 AL031432.3-201ENST00000607698 485 ntBASIC21.71■■□□□ 1.07
LDB2O43679 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.71■■□□□ 1.07
LDB2O43679 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LDB2O43679 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LDB2O43679 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
LDB2O43679 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
LDB2O43679 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
LDB2O43679 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
LDB2O43679 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
LDB2O43679 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LDB2O43679 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
LDB2O43679 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.7■■□□□ 1.06
LDB2O43679 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
LDB2O43679 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LDB2O43679 AP001330.3-201ENST00000520123 633 ntBASIC21.7■■□□□ 1.06
LDB2O43679 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.7■■□□□ 1.06
LDB2O43679 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
LDB2O43679 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
LDB2O43679 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
LDB2O43679 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.7■■□□□ 1.06
LDB2O43679 OR7E47P-201ENST00000546390 1422 ntBASIC21.7■■□□□ 1.06
LDB2O43679 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
LDB2O43679 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.7■■□□□ 1.06
LDB2O43679 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.7■■□□□ 1.06
LDB2O43679 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.7■■□□□ 1.06
LDB2O43679 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
LDB2O43679 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
LDB2O43679 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LDB2O43679 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LDB2O43679 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.69■■□□□ 1.06
LDB2O43679 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.69■■□□□ 1.06
LDB2O43679 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.69■■□□□ 1.06
LDB2O43679 AL355001.2-201ENST00000620617 1191 ntBASIC21.69■■□□□ 1.06
LDB2O43679 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LDB2O43679 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
LDB2O43679 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LDB2O43679 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
LDB2O43679 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
LDB2O43679 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LDB2O43679 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LDB2O43679 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms