Protein–RNA interactions for Protein: A0A0A0MS06

TRBV23-1, T-cell receptor beta variable 23-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23-1A0A0A0MS06 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRBV23-1A0A0A0MS06 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRBV23-1A0A0A0MS06 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRBV23-1A0A0A0MS06 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRBV23-1A0A0A0MS06 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRBV23-1A0A0A0MS06 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRBV23-1A0A0A0MS06 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
TRBV23-1A0A0A0MS06 BX842568.3-201ENST00000418104 571 ntBASIC18.21■□□□□ 0.51
TRBV23-1A0A0A0MS06 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.21■□□□□ 0.51
TRBV23-1A0A0A0MS06 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRBV23-1A0A0A0MS06 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
TRBV23-1A0A0A0MS06 AL355001.2-201ENST00000620617 1191 ntBASIC18.21■□□□□ 0.51
TRBV23-1A0A0A0MS06 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.21■□□□□ 0.51
TRBV23-1A0A0A0MS06 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
TRBV23-1A0A0A0MS06 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRBV23-1A0A0A0MS06 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRBV23-1A0A0A0MS06 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRBV23-1A0A0A0MS06 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.21■□□□□ 0.5
TRBV23-1A0A0A0MS06 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
TRBV23-1A0A0A0MS06 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRBV23-1A0A0A0MS06 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRBV23-1A0A0A0MS06 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.2■□□□□ 0.5
TRBV23-1A0A0A0MS06 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRBV23-1A0A0A0MS06 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.2■□□□□ 0.5
TRBV23-1A0A0A0MS06 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRBV23-1A0A0A0MS06 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.2■□□□□ 0.5
TRBV23-1A0A0A0MS06 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRBV23-1A0A0A0MS06 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.2■□□□□ 0.5
TRBV23-1A0A0A0MS06 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.2■□□□□ 0.5
TRBV23-1A0A0A0MS06 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.2■□□□□ 0.5
TRBV23-1A0A0A0MS06 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.2■□□□□ 0.5
TRBV23-1A0A0A0MS06 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.2■□□□□ 0.5
TRBV23-1A0A0A0MS06 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.2■□□□□ 0.5
TRBV23-1A0A0A0MS06 AC068587.7-201ENST00000641602 218 ntBASIC18.2■□□□□ 0.5
TRBV23-1A0A0A0MS06 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
TRBV23-1A0A0A0MS06 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
TRBV23-1A0A0A0MS06 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.2■□□□□ 0.5
TRBV23-1A0A0A0MS06 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRBV23-1A0A0A0MS06 AC007375.3-201ENST00000600936 2314 ntBASIC18.2■□□□□ 0.5
TRBV23-1A0A0A0MS06 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRBV23-1A0A0A0MS06 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRBV23-1A0A0A0MS06 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
TRBV23-1A0A0A0MS06 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRBV23-1A0A0A0MS06 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRBV23-1A0A0A0MS06 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TRBV23-1A0A0A0MS06 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
TRBV23-1A0A0A0MS06 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRBV23-1A0A0A0MS06 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRBV23-1A0A0A0MS06 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRBV23-1A0A0A0MS06 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TRBV23-1A0A0A0MS06 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.19■□□□□ 0.5
TRBV23-1A0A0A0MS06 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRBV23-1A0A0A0MS06 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRBV23-1A0A0A0MS06 AL117328.2-201ENST00000624617 1940 ntBASIC18.19■□□□□ 0.5
TRBV23-1A0A0A0MS06 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.19■□□□□ 0.5
TRBV23-1A0A0A0MS06 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.19■□□□□ 0.5
TRBV23-1A0A0A0MS06 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
TRBV23-1A0A0A0MS06 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV23-1A0A0A0MS06 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV23-1A0A0A0MS06 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
TRBV23-1A0A0A0MS06 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV23-1A0A0A0MS06 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.18■□□□□ 0.5
TRBV23-1A0A0A0MS06 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV23-1A0A0A0MS06 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV23-1A0A0A0MS06 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV23-1A0A0A0MS06 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV23-1A0A0A0MS06 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TRBV23-1A0A0A0MS06 AC027682.1-201ENST00000562846 899 ntBASIC18.18■□□□□ 0.5
TRBV23-1A0A0A0MS06 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.18■□□□□ 0.5
TRBV23-1A0A0A0MS06 AC233992.3-201ENST00000607491 485 ntBASIC18.18■□□□□ 0.5
TRBV23-1A0A0A0MS06 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.18■□□□□ 0.5
TRBV23-1A0A0A0MS06 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV23-1A0A0A0MS06 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV23-1A0A0A0MS06 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV23-1A0A0A0MS06 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV23-1A0A0A0MS06 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV23-1A0A0A0MS06 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV23-1A0A0A0MS06 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV23-1A0A0A0MS06 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
TRBV23-1A0A0A0MS06 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV23-1A0A0A0MS06 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.17■□□□□ 0.5
TRBV23-1A0A0A0MS06 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.17■□□□□ 0.5
TRBV23-1A0A0A0MS06 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.17■□□□□ 0.5
TRBV23-1A0A0A0MS06 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TRBV23-1A0A0A0MS06 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV23-1A0A0A0MS06 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV23-1A0A0A0MS06 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV23-1A0A0A0MS06 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
TRBV23-1A0A0A0MS06 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
TRBV23-1A0A0A0MS06 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV23-1A0A0A0MS06 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV23-1A0A0A0MS06 EP400NL-214ENST00000641289 2402 ntBASIC18.17■□□□□ 0.5
TRBV23-1A0A0A0MS06 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV23-1A0A0A0MS06 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.16■□□□□ 0.5
TRBV23-1A0A0A0MS06 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TRBV23-1A0A0A0MS06 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV23-1A0A0A0MS06 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV23-1A0A0A0MS06 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV23-1A0A0A0MS06 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV23-1A0A0A0MS06 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms