Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.69■□□□□ 0.9
VCX3BQ9H321 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VCX3BQ9H321 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
VCX3BQ9H321 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VCX3BQ9H321 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.68■□□□□ 0.9
VCX3BQ9H321 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.68■□□□□ 0.9
VCX3BQ9H321 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
VCX3BQ9H321 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
VCX3BQ9H321 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
VCX3BQ9H321 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VCX3BQ9H321 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
VCX3BQ9H321 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.68■□□□□ 0.9
VCX3BQ9H321 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
VCX3BQ9H321 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VCX3BQ9H321 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
VCX3BQ9H321 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.67■□□□□ 0.9
VCX3BQ9H321 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VCX3BQ9H321 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
VCX3BQ9H321 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
VCX3BQ9H321 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
VCX3BQ9H321 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
VCX3BQ9H321 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
VCX3BQ9H321 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VCX3BQ9H321 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
VCX3BQ9H321 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
VCX3BQ9H321 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
VCX3BQ9H321 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.66■□□□□ 0.9
VCX3BQ9H321 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
VCX3BQ9H321 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VCX3BQ9H321 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VCX3BQ9H321 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VCX3BQ9H321 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VCX3BQ9H321 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VCX3BQ9H321 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.66■□□□□ 0.9
VCX3BQ9H321 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VCX3BQ9H321 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
VCX3BQ9H321 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VCX3BQ9H321 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.65■□□□□ 0.9
VCX3BQ9H321 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VCX3BQ9H321 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VCX3BQ9H321 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VCX3BQ9H321 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
VCX3BQ9H321 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
VCX3BQ9H321 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VCX3BQ9H321 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VCX3BQ9H321 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VCX3BQ9H321 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.65■□□□□ 0.9
VCX3BQ9H321 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.65■□□□□ 0.9
VCX3BQ9H321 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
VCX3BQ9H321 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.65■□□□□ 0.9
VCX3BQ9H321 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
VCX3BQ9H321 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.65■□□□□ 0.9
VCX3BQ9H321 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
VCX3BQ9H321 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
VCX3BQ9H321 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
VCX3BQ9H321 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VCX3BQ9H321 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
VCX3BQ9H321 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VCX3BQ9H321 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VCX3BQ9H321 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VCX3BQ9H321 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
VCX3BQ9H321 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VCX3BQ9H321 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
VCX3BQ9H321 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VCX3BQ9H321 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.63■□□□□ 0.89
VCX3BQ9H321 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.63■□□□□ 0.89
VCX3BQ9H321 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
VCX3BQ9H321 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.63■□□□□ 0.89
VCX3BQ9H321 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
VCX3BQ9H321 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
VCX3BQ9H321 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.63■□□□□ 0.89
VCX3BQ9H321 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
VCX3BQ9H321 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
VCX3BQ9H321 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
VCX3BQ9H321 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
VCX3BQ9H321 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.63■□□□□ 0.89
VCX3BQ9H321 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.63■□□□□ 0.89
VCX3BQ9H321 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.62■□□□□ 0.89
VCX3BQ9H321 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
VCX3BQ9H321 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.62■□□□□ 0.89
VCX3BQ9H321 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.62■□□□□ 0.89
VCX3BQ9H321 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.62■□□□□ 0.89
VCX3BQ9H321 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.62■□□□□ 0.89
VCX3BQ9H321 DUX4L11-201ENST00000611504 1267 ntBASIC20.62■□□□□ 0.89
VCX3BQ9H321 DUX4L12-201ENST00000614593 1267 ntBASIC20.62■□□□□ 0.89
VCX3BQ9H321 DUX4L14-201ENST00000621227 1267 ntBASIC20.62■□□□□ 0.89
VCX3BQ9H321 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VCX3BQ9H321 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
VCX3BQ9H321 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
VCX3BQ9H321 Z98882.1-201ENST00000622160 2253 ntBASIC20.62■□□□□ 0.89
VCX3BQ9H321 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VCX3BQ9H321 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
VCX3BQ9H321 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
VCX3BQ9H321 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.62■□□□□ 0.89
VCX3BQ9H321 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
VCX3BQ9H321 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
VCX3BQ9H321 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
VCX3BQ9H321 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
VCX3BQ9H321 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
VCX3BQ9H321 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms