Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
UPK1BO75841 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
UPK1BO75841 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
UPK1BO75841 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19■□□□□ 0.63
UPK1BO75841 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
UPK1BO75841 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
UPK1BO75841 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.99■□□□□ 0.63
UPK1BO75841 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.99■□□□□ 0.63
UPK1BO75841 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
UPK1BO75841 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.99■□□□□ 0.63
UPK1BO75841 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.99■□□□□ 0.63
UPK1BO75841 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
UPK1BO75841 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
UPK1BO75841 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UPK1BO75841 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
UPK1BO75841 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
UPK1BO75841 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
UPK1BO75841 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UPK1BO75841 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
UPK1BO75841 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
UPK1BO75841 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
UPK1BO75841 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.99■□□□□ 0.63
UPK1BO75841 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
UPK1BO75841 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
UPK1BO75841 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
UPK1BO75841 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
UPK1BO75841 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
UPK1BO75841 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.98■□□□□ 0.63
UPK1BO75841 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
UPK1BO75841 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
UPK1BO75841 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
UPK1BO75841 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.98■□□□□ 0.63
UPK1BO75841 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
UPK1BO75841 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
UPK1BO75841 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
UPK1BO75841 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UPK1BO75841 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
UPK1BO75841 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
UPK1BO75841 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UPK1BO75841 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
UPK1BO75841 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UPK1BO75841 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
UPK1BO75841 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UPK1BO75841 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.97■□□□□ 0.63
UPK1BO75841 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.97■□□□□ 0.63
UPK1BO75841 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.97■□□□□ 0.63
UPK1BO75841 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.97■□□□□ 0.63
UPK1BO75841 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UPK1BO75841 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UPK1BO75841 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.97■□□□□ 0.63
UPK1BO75841 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UPK1BO75841 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
UPK1BO75841 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UPK1BO75841 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
UPK1BO75841 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
UPK1BO75841 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UPK1BO75841 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
UPK1BO75841 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UPK1BO75841 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UPK1BO75841 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UPK1BO75841 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
UPK1BO75841 AFG3L1P-217ENST00000557444 2447 ntBASIC18.96■□□□□ 0.63
UPK1BO75841 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UPK1BO75841 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
UPK1BO75841 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.96■□□□□ 0.63
UPK1BO75841 AC144652.1-201ENST00000609974 1624 ntBASIC18.96■□□□□ 0.63
UPK1BO75841 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
UPK1BO75841 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
UPK1BO75841 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
UPK1BO75841 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UPK1BO75841 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
UPK1BO75841 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
UPK1BO75841 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UPK1BO75841 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
UPK1BO75841 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UPK1BO75841 KRT18P10-201ENST00000388836 1287 ntBASIC18.95■□□□□ 0.62
UPK1BO75841 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UPK1BO75841 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UPK1BO75841 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.95■□□□□ 0.62
UPK1BO75841 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UPK1BO75841 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UPK1BO75841 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UPK1BO75841 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
UPK1BO75841 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UPK1BO75841 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
UPK1BO75841 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
UPK1BO75841 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.94■□□□□ 0.62
UPK1BO75841 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UPK1BO75841 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
UPK1BO75841 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC18.94■□□□□ 0.62
UPK1BO75841 DUX4L13-201ENST00000554103 1267 ntBASIC18.94■□□□□ 0.62
UPK1BO75841 DUX4L15-201ENST00000611059 1267 ntBASIC18.94■□□□□ 0.62
UPK1BO75841 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC18.94■□□□□ 0.62
UPK1BO75841 DUX4L23-201ENST00000615195 1269 ntBASIC18.94■□□□□ 0.62
UPK1BO75841 DUX4L24-201ENST00000617576 1269 ntBASIC18.94■□□□□ 0.62
UPK1BO75841 DUX4L22-201ENST00000618238 1269 ntBASIC18.94■□□□□ 0.62
UPK1BO75841 DUX4L20-201ENST00000619712 1269 ntBASIC18.94■□□□□ 0.62
UPK1BO75841 DUX4L21-201ENST00000622058 1269 ntBASIC18.94■□□□□ 0.62
UPK1BO75841 DUX4L10-201ENST00000622460 1267 ntBASIC18.94■□□□□ 0.62
UPK1BO75841 DUX4L25-201ENST00000624915 1269 ntBASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms