Protein–RNA interactions for Protein: A0A096LPE2

SAA2-SAA4, SAA2-SAA4 readthrough, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA2-SAA4A0A096LPE2 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SAA2-SAA4A0A096LPE2 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SAA2-SAA4A0A096LPE2 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SAA2-SAA4A0A096LPE2 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
SAA2-SAA4A0A096LPE2 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC17.79■□□□□ 0.44
SAA2-SAA4A0A096LPE2 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC17.79■□□□□ 0.44
SAA2-SAA4A0A096LPE2 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC17.79■□□□□ 0.44
SAA2-SAA4A0A096LPE2 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SAA2-SAA4A0A096LPE2 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC17.79■□□□□ 0.44
SAA2-SAA4A0A096LPE2 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SAA2-SAA4A0A096LPE2 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC17.79■□□□□ 0.44
SAA2-SAA4A0A096LPE2 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SAA2-SAA4A0A096LPE2 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SAA2-SAA4A0A096LPE2 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SAA2-SAA4A0A096LPE2 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SAA2-SAA4A0A096LPE2 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
SAA2-SAA4A0A096LPE2 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SAA2-SAA4A0A096LPE2 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SAA2-SAA4A0A096LPE2 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SAA2-SAA4A0A096LPE2 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SAA2-SAA4A0A096LPE2 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SAA2-SAA4A0A096LPE2 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SAA2-SAA4A0A096LPE2 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SAA2-SAA4A0A096LPE2 AC131281.2-201ENST00000520478 145 ntBASIC17.78■□□□□ 0.44
SAA2-SAA4A0A096LPE2 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC17.78■□□□□ 0.44
SAA2-SAA4A0A096LPE2 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
SAA2-SAA4A0A096LPE2 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SAA2-SAA4A0A096LPE2 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC17.78■□□□□ 0.44
SAA2-SAA4A0A096LPE2 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SAA2-SAA4A0A096LPE2 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC17.78■□□□□ 0.44
SAA2-SAA4A0A096LPE2 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SAA2-SAA4A0A096LPE2 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SAA2-SAA4A0A096LPE2 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC17.78■□□□□ 0.44
SAA2-SAA4A0A096LPE2 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
SAA2-SAA4A0A096LPE2 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
SAA2-SAA4A0A096LPE2 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SAA2-SAA4A0A096LPE2 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC17.77■□□□□ 0.44
SAA2-SAA4A0A096LPE2 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC17.77■□□□□ 0.44
SAA2-SAA4A0A096LPE2 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC17.77■□□□□ 0.44
SAA2-SAA4A0A096LPE2 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SAA2-SAA4A0A096LPE2 PTCHD3P2-201ENST00000424937 1205 ntBASIC17.77■□□□□ 0.44
SAA2-SAA4A0A096LPE2 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC17.77■□□□□ 0.44
SAA2-SAA4A0A096LPE2 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC17.77■□□□□ 0.44
SAA2-SAA4A0A096LPE2 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC17.77■□□□□ 0.44
SAA2-SAA4A0A096LPE2 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SAA2-SAA4A0A096LPE2 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SAA2-SAA4A0A096LPE2 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SAA2-SAA4A0A096LPE2 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC17.77■□□□□ 0.43
SAA2-SAA4A0A096LPE2 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SAA2-SAA4A0A096LPE2 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.43
SAA2-SAA4A0A096LPE2 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
SAA2-SAA4A0A096LPE2 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SAA2-SAA4A0A096LPE2 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SAA2-SAA4A0A096LPE2 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
SAA2-SAA4A0A096LPE2 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SAA2-SAA4A0A096LPE2 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SAA2-SAA4A0A096LPE2 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SAA2-SAA4A0A096LPE2 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SAA2-SAA4A0A096LPE2 AL031602.1-201ENST00000633169 911 ntBASIC17.76■□□□□ 0.43
SAA2-SAA4A0A096LPE2 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC17.76■□□□□ 0.43
SAA2-SAA4A0A096LPE2 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SAA2-SAA4A0A096LPE2 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SAA2-SAA4A0A096LPE2 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SAA2-SAA4A0A096LPE2 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SAA2-SAA4A0A096LPE2 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC17.76■□□□□ 0.43
SAA2-SAA4A0A096LPE2 STX4-202ENST00000394998 1498 ntTSL 2 BASIC17.75■□□□□ 0.43
SAA2-SAA4A0A096LPE2 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SAA2-SAA4A0A096LPE2 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC17.75■□□□□ 0.43
SAA2-SAA4A0A096LPE2 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SAA2-SAA4A0A096LPE2 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC17.75■□□□□ 0.43
SAA2-SAA4A0A096LPE2 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SAA2-SAA4A0A096LPE2 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC17.75■□□□□ 0.43
SAA2-SAA4A0A096LPE2 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC17.75■□□□□ 0.43
SAA2-SAA4A0A096LPE2 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC17.75■□□□□ 0.43
SAA2-SAA4A0A096LPE2 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
SAA2-SAA4A0A096LPE2 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SAA2-SAA4A0A096LPE2 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SAA2-SAA4A0A096LPE2 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC17.75■□□□□ 0.43
SAA2-SAA4A0A096LPE2 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SAA2-SAA4A0A096LPE2 SYT6-210ENST00000641643 1587 ntBASIC17.74■□□□□ 0.43
SAA2-SAA4A0A096LPE2 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SAA2-SAA4A0A096LPE2 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SAA2-SAA4A0A096LPE2 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SAA2-SAA4A0A096LPE2 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SAA2-SAA4A0A096LPE2 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SAA2-SAA4A0A096LPE2 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SAA2-SAA4A0A096LPE2 OR2I1P-207ENST00000453522 948 ntBASIC17.74■□□□□ 0.43
SAA2-SAA4A0A096LPE2 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC17.74■□□□□ 0.43
SAA2-SAA4A0A096LPE2 WWC2-AS2-201ENST00000578387 2183 ntBASIC17.74■□□□□ 0.43
SAA2-SAA4A0A096LPE2 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SAA2-SAA4A0A096LPE2 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC17.74■□□□□ 0.43
SAA2-SAA4A0A096LPE2 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SAA2-SAA4A0A096LPE2 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
SAA2-SAA4A0A096LPE2 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SAA2-SAA4A0A096LPE2 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC17.73■□□□□ 0.43
SAA2-SAA4A0A096LPE2 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SAA2-SAA4A0A096LPE2 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SAA2-SAA4A0A096LPE2 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SAA2-SAA4A0A096LPE2 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC17.73■□□□□ 0.43
SAA2-SAA4A0A096LPE2 SERBP1P1-201ENST00000396021 1160 ntBASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms