Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
CSNK1G3Q9Y6M4 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
CSNK1G3Q9Y6M4 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CSNK1G3Q9Y6M4 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.41■■□□□ 1.02
CSNK1G3Q9Y6M4 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CSNK1G3Q9Y6M4 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CSNK1G3Q9Y6M4 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.41■■□□□ 1.02
CSNK1G3Q9Y6M4 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.41■■□□□ 1.02
CSNK1G3Q9Y6M4 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.41■■□□□ 1.02
CSNK1G3Q9Y6M4 SMUG1P1-201ENST00000590640 811 ntBASIC21.41■■□□□ 1.02
CSNK1G3Q9Y6M4 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.41■■□□□ 1.02
CSNK1G3Q9Y6M4 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CSNK1G3Q9Y6M4 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CSNK1G3Q9Y6M4 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.41■■□□□ 1.02
CSNK1G3Q9Y6M4 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.41■■□□□ 1.02
CSNK1G3Q9Y6M4 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CSNK1G3Q9Y6M4 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CSNK1G3Q9Y6M4 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CSNK1G3Q9Y6M4 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.4■■□□□ 1.02
CSNK1G3Q9Y6M4 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CSNK1G3Q9Y6M4 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CSNK1G3Q9Y6M4 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.4■■□□□ 1.02
CSNK1G3Q9Y6M4 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.4■■□□□ 1.02
CSNK1G3Q9Y6M4 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CSNK1G3Q9Y6M4 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.4■■□□□ 1.02
CSNK1G3Q9Y6M4 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.4■■□□□ 1.02
CSNK1G3Q9Y6M4 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CSNK1G3Q9Y6M4 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CSNK1G3Q9Y6M4 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CSNK1G3Q9Y6M4 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
CSNK1G3Q9Y6M4 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CSNK1G3Q9Y6M4 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CSNK1G3Q9Y6M4 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
CSNK1G3Q9Y6M4 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CSNK1G3Q9Y6M4 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CSNK1G3Q9Y6M4 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CSNK1G3Q9Y6M4 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CSNK1G3Q9Y6M4 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CSNK1G3Q9Y6M4 OXCT2P1-201ENST00000447263 1535 ntBASIC21.39■■□□□ 1.01
CSNK1G3Q9Y6M4 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CSNK1G3Q9Y6M4 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CSNK1G3Q9Y6M4 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CSNK1G3Q9Y6M4 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
CSNK1G3Q9Y6M4 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
CSNK1G3Q9Y6M4 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.38■■□□□ 1.01
CSNK1G3Q9Y6M4 AC006015.1-201ENST00000429970 570 ntBASIC21.38■■□□□ 1.01
CSNK1G3Q9Y6M4 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.38■■□□□ 1.01
CSNK1G3Q9Y6M4 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.38■■□□□ 1.01
CSNK1G3Q9Y6M4 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.38■■□□□ 1.01
CSNK1G3Q9Y6M4 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
CSNK1G3Q9Y6M4 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.38■■□□□ 1.01
CSNK1G3Q9Y6M4 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CSNK1G3Q9Y6M4 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CSNK1G3Q9Y6M4 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CSNK1G3Q9Y6M4 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.37■■□□□ 1.01
CSNK1G3Q9Y6M4 AP004607.4-201ENST00000530158 1459 ntBASIC21.37■■□□□ 1.01
CSNK1G3Q9Y6M4 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CSNK1G3Q9Y6M4 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.37■■□□□ 1.01
CSNK1G3Q9Y6M4 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CSNK1G3Q9Y6M4 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CSNK1G3Q9Y6M4 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CSNK1G3Q9Y6M4 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CSNK1G3Q9Y6M4 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CSNK1G3Q9Y6M4 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.36■■□□□ 1.01
CSNK1G3Q9Y6M4 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CSNK1G3Q9Y6M4 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CSNK1G3Q9Y6M4 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CSNK1G3Q9Y6M4 KRT18P61-201ENST00000585825 1298 ntBASIC21.36■■□□□ 1.01
CSNK1G3Q9Y6M4 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
CSNK1G3Q9Y6M4 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.36■■□□□ 1.01
CSNK1G3Q9Y6M4 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CSNK1G3Q9Y6M4 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.36■■□□□ 1.01
CSNK1G3Q9Y6M4 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CSNK1G3Q9Y6M4 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CSNK1G3Q9Y6M4 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.35■■□□□ 1.01
CSNK1G3Q9Y6M4 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CSNK1G3Q9Y6M4 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CSNK1G3Q9Y6M4 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CSNK1G3Q9Y6M4 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.35■■□□□ 1.01
CSNK1G3Q9Y6M4 AC137761.2-201ENST00000561729 223 ntBASIC21.35■■□□□ 1.01
CSNK1G3Q9Y6M4 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.35■■□□□ 1.01
CSNK1G3Q9Y6M4 AC145350.3-201ENST00000569033 163 ntBASIC21.35■■□□□ 1.01
CSNK1G3Q9Y6M4 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.35■■□□□ 1.01
CSNK1G3Q9Y6M4 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CSNK1G3Q9Y6M4 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CSNK1G3Q9Y6M4 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CSNK1G3Q9Y6M4 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.35■■□□□ 1.01
CSNK1G3Q9Y6M4 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CSNK1G3Q9Y6M4 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CSNK1G3Q9Y6M4 ID1-201ENST00000376105 1233 ntBASIC21.34■■□□□ 1.01
CSNK1G3Q9Y6M4 AC016769.1-201ENST00000409132 1010 ntBASIC21.34■■□□□ 1.01
CSNK1G3Q9Y6M4 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.34■■□□□ 1.01
CSNK1G3Q9Y6M4 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.34■■□□□ 1.01
CSNK1G3Q9Y6M4 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.34■■□□□ 1.01
CSNK1G3Q9Y6M4 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CSNK1G3Q9Y6M4 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CSNK1G3Q9Y6M4 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CSNK1G3Q9Y6M4 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CSNK1G3Q9Y6M4 KRT19P1-201ENST00000405746 1186 ntBASIC21.33■■□□□ 1.01
CSNK1G3Q9Y6M4 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.33■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms