Protein–RNA interactions for Protein: Q9Y2R4

DDX52, Probable ATP-dependent RNA helicase DDX52, humanhuman

Known RBP eCLIP

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX52Q9Y2R4 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.136e-6■□□□□ 11.2
DDX52Q9Y2R4 MED13L-207ENST00000551197 489 ntTSL 56.6□□□□□ -1.356e-6■□□□□ 11.2
DDX52Q9Y2R4 GAB3-206ENST00000496390 4240 ntTSL 1 (best)6.47□□□□□ -1.374e-7■□□□□ 11.2
DDX52Q9Y2R4 USP10-218ENST00000570053 502 ntTSL 34.73□□□□□ -1.654e-7■□□□□ 11.2
DDX52Q9Y2R4 EHMT1-234ENST00000636526 100 ntTSL 52.59□□□□□ -1.996e-6■□□□□ 11.2
DDX52Q9Y2R4 ESYT2-202ENST00000275418 3251 ntAPPRIS ALT2 TSL 522.55■■□□□ 1.24e-6■□□□□ 11.1
DDX52Q9Y2R4 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.854e-6■□□□□ 11.1
DDX52Q9Y2R4 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.724e-6■□□□□ 11.1
DDX52Q9Y2R4 ESYT2-205ENST00000497111 663 ntTSL 418.18■□□□□ 0.54e-6■□□□□ 11.1
DDX52Q9Y2R4 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.377e-7■□□□□ 11.1
DDX52Q9Y2R4 PRDX1-202ENST00000319248 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.117e-7■□□□□ 11.1
DDX52Q9Y2R4 PRDX1-203ENST00000372079 609 ntTSL 3 BASIC14.01□□□□□ -0.177e-7■□□□□ 11.1
DDX52Q9Y2R4 TMEM74B-203ENST00000481747 582 ntTSL 233.5■■■□□ 2.957e-7■□□□□ 11
DDX52Q9Y2R4 IGF2BP3-213ENST00000491719 800 ntTSL 524.42■■□□□ 1.57e-7■□□□□ 11
DDX52Q9Y2R4 IGF2BP3-210ENST00000476938 500 ntTSL 218.96■□□□□ 0.637e-7■□□□□ 11
DDX52Q9Y2R4 IGF2BP3-206ENST00000468005 2948 ntTSL 515.93■□□□□ 0.147e-7■□□□□ 11
DDX52Q9Y2R4 IGF2BP3-202ENST00000421467 2988 ntTSL 510.53□□□□□ -0.727e-7■□□□□ 11
DDX52Q9Y2R4 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.27e-7■□□□□ 11
DDX52Q9Y2R4 AP3D1-209ENST00000591284 580 ntTSL 522.59■■□□□ 1.211e-9■□□□□ 11
DDX52Q9Y2R4 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.411e-9■□□□□ 11
DDX52Q9Y2R4 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.331e-9■□□□□ 11
DDX52Q9Y2R4 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC19.31■□□□□ 0.683e-11■□□□□ 11
DDX52Q9Y2R4 SLC6A8-209ENST00000476466 470 ntTSL 316.84■□□□□ 0.293e-11■□□□□ 11
DDX52Q9Y2R4 ARHGEF2-217ENST00000497907 764 ntTSL 322.96■■□□□ 1.271e-6■□□□□ 11
DDX52Q9Y2R4 ARHGEF2-216ENST00000495070 571 ntTSL 419.46■□□□□ 0.711e-6■□□□□ 11
DDX52Q9Y2R4 ARHGEF2-213ENST00000476273 668 ntTSL 316.55■□□□□ 0.241e-6■□□□□ 11
DDX52Q9Y2R4 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.071e-6■□□□□ 11
DDX52Q9Y2R4 ARHGEF2-203ENST00000361247 4149 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.21e-6■□□□□ 11
DDX52Q9Y2R4 ARHGEF2-211ENST00000471589 892 ntTSL 513.67□□□□□ -0.221e-6■□□□□ 11
DDX52Q9Y2R4 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC13.55□□□□□ -0.241e-6■□□□□ 11
DDX52Q9Y2R4 ARHGEF2-207ENST00000465079 693 ntTSL 213.45□□□□□ -0.261e-6■□□□□ 11
DDX52Q9Y2R4 ARHGEF2-202ENST00000313695 4080 ntTSL 1 (best) BASIC12.9□□□□□ -0.341e-6■□□□□ 11
DDX52Q9Y2R4 ARHGEF2-214ENST00000477754 883 ntTSL 56.65□□□□□ -1.341e-6■□□□□ 11
DDX52Q9Y2R4 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.424e-8■□□□□ 11
DDX52Q9Y2R4 WDR4-207ENST00000492742 2205 ntTSL 222.98■■□□□ 1.274e-8■□□□□ 11
DDX52Q9Y2R4 WDR4-205ENST00000476326 1977 ntTSL 1 (best)16.84■□□□□ 0.294e-8■□□□□ 11
DDX52Q9Y2R4 SLC6A8-203ENST00000429147 334 ntTSL 219.91■□□□□ 0.786e-12■□□□□ 10.9
DDX52Q9Y2R4 SLC6A8-208ENST00000467402 308 ntTSL 514.12□□□□□ -0.156e-12■□□□□ 10.9
DDX52Q9Y2R4 GNL3-201ENST00000394799 2041 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.022e-13■□□□□ 10.9
DDX52Q9Y2R4 GNL3-202ENST00000418458 2040 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.162e-13■□□□□ 10.9
DDX52Q9Y2R4 GNL3-205ENST00000468146 533 ntTSL 412.29□□□□□ -0.442e-13■□□□□ 10.9
DDX52Q9Y2R4 GNL3-210ENST00000492349 729 ntTSL 29.38□□□□□ -0.912e-13■□□□□ 10.9
DDX52Q9Y2R4 GNL3-211ENST00000496254 2118 ntTSL 56.44□□□□□ -1.382e-13■□□□□ 10.9
DDX52Q9Y2R4 GNL3-208ENST00000479230 547 ntTSL 45.69□□□□□ -1.52e-13■□□□□ 10.9
DDX52Q9Y2R4 GNL3-209ENST00000484022 668 ntTSL 24.52□□□□□ -1.692e-13■□□□□ 10.9
DDX52Q9Y2R4 SNORD19.2-201ENST00000516978 73 ntBASIC2.85□□□□□ -1.952e-13■□□□□ 10.9
DDX52Q9Y2R4 SNORD19B.1-201ENST00000630615 80 ntBASIC-2.07□□□□□ -2.742e-13■□□□□ 10.9
DDX52Q9Y2R4 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.993e-6■□□□□ 10.9
DDX52Q9Y2R4 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC23.13■■□□□ 1.293e-6■□□□□ 10.9
DDX52Q9Y2R4 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.65■□□□□ 0.743e-6■□□□□ 10.9
DDX52Q9Y2R4 MRPS6-202ENST00000477091 1061 ntTSL 520.85■□□□□ 0.934e-7■□□□□ 10.9
DDX52Q9Y2R4 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.564e-7■□□□□ 10.9
DDX52Q9Y2R4 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC18.18■□□□□ 0.54e-7■□□□□ 10.9
DDX52Q9Y2R4 MRPS6-205ENST00000488492 909 ntTSL 57.03□□□□□ -1.284e-7■□□□□ 10.9
DDX52Q9Y2R4 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.834e-7■□□□□ 10.9
DDX52Q9Y2R4 FASN-211ENST00000637026 100 ntTSL 511.9□□□□□ -0.56e-12■□□□□ 10.9
DDX52Q9Y2R4 AC092127.1-201ENST00000567093 3455 ntBASIC18.46■□□□□ 0.553e-7■□□□□ 10.9
DDX52Q9Y2R4 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.256e-17■□□□□ 10.8
DDX52Q9Y2R4 XPO1-206ENST00000428210 6776 ntTSL 214.16□□□□□ -0.146e-17■□□□□ 10.8
DDX52Q9Y2R4 XPO1-203ENST00000406957 3479 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.796e-17■□□□□ 10.8
DDX52Q9Y2R4 XPO1-212ENST00000457483 488 ntTSL 47.52□□□□□ -1.216e-17■□□□□ 10.8
DDX52Q9Y2R4 XPO1-209ENST00000443240 565 ntTSL 44.69□□□□□ -1.666e-17■□□□□ 10.8
DDX52Q9Y2R4 XPO1-207ENST00000436018 318 ntTSL 44.04□□□□□ -1.766e-17■□□□□ 10.8
DDX52Q9Y2R4 XPO1-220ENST00000481214 720 ntTSL 22.47□□□□□ -2.016e-17■□□□□ 10.8
DDX52Q9Y2R4 SIRT7-210ENST00000572902 909 ntTSL 325.59■■□□□ 1.693e-6■□□□□ 10.8
DDX52Q9Y2R4 RANBP1-212ENST00000467920 529 ntTSL 25.76□□□□□ -1.496e-7■□□□□ 10.8
DDX52Q9Y2R4 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.927e-8■□□□□ 10.7
DDX52Q9Y2R4 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.017e-8■□□□□ 10.7
DDX52Q9Y2R4 E2F3-203ENST00000613242 4094 ntTSL 5 BASIC12.96□□□□□ -0.337e-8■□□□□ 10.7
DDX52Q9Y2R4 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.412e-7■□□□□ 10.7
DDX52Q9Y2R4 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.322e-7■□□□□ 10.7
DDX52Q9Y2R4 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.212e-7■□□□□ 10.7
DDX52Q9Y2R4 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.212e-7■□□□□ 10.7
DDX52Q9Y2R4 CUX1-201ENST00000292535 13747 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.92e-7■□□□□ 10.7
DDX52Q9Y2R4 PTBP1-217ENST00000592113 1548 ntTSL 526.62■■□□□ 1.858e-11■□□□□ 10.7
DDX52Q9Y2R4 PTBP1-218ENST00000592804 742 ntTSL 223.17■■□□□ 1.38e-11■□□□□ 10.7
DDX52Q9Y2R4 GNB1-207ENST00000472614 708 ntTSL 226.98■■□□□ 1.912e-7■□□□□ 10.7
DDX52Q9Y2R4 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC24.45■■□□□ 1.512e-7■□□□□ 10.7
DDX52Q9Y2R4 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.22e-7■□□□□ 10.7
DDX52Q9Y2R4 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.072e-7■□□□□ 10.7
DDX52Q9Y2R4 MELTF-205ENST00000473501 2757 ntTSL 223.38■■□□□ 1.331e-6■□□□□ 10.6
DDX52Q9Y2R4 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC22.66■■□□□ 1.221e-6■□□□□ 10.6
DDX52Q9Y2R4 MELTF-203ENST00000439320 629 ntTSL 320.85■□□□□ 0.931e-6■□□□□ 10.6
DDX52Q9Y2R4 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.461e-6■□□□□ 10.6
DDX52Q9Y2R4 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.122e-6■□□□□ 10.6
DDX52Q9Y2R4 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC27.8■■■□□ 2.042e-6■□□□□ 10.6
DDX52Q9Y2R4 RABL6-210ENST00000484471 2746 ntTSL 521.96■■□□□ 1.112e-6■□□□□ 10.6
DDX52Q9Y2R4 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.742e-6■□□□□ 10.6
DDX52Q9Y2R4 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.672e-6■□□□□ 10.6
DDX52Q9Y2R4 RABL6-208ENST00000464941 3361 ntTSL 218.82■□□□□ 0.62e-6■□□□□ 10.6
DDX52Q9Y2R4 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.42e-6■□□□□ 10.6
DDX52Q9Y2R4 RABL6-206ENST00000436380 2547 ntAPPRIS ALT2 TSL 216.86■□□□□ 0.292e-6■□□□□ 10.6
DDX52Q9Y2R4 AL355987.2-201ENST00000471502 561 ntTSL 4 BASIC15.03■□□□□ -02e-6■□□□□ 10.6
DDX52Q9Y2R4 ASGR2-201ENST00000254850 1396 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.052e-6■□□□□ 10.6
DDX52Q9Y2R4 ASGR2-202ENST00000355035 1386 ntTSL 1 (best) BASIC15.38■□□□□ 0.052e-6■□□□□ 10.6
DDX52Q9Y2R4 MYO18A-220ENST00000588791 650 ntTSL 518.9■□□□□ 0.623e-6■□□□□ 10.6
DDX52Q9Y2R4 MYO18A-207ENST00000530254 6479 ntTSL 1 (best)13.49□□□□□ -0.253e-6■□□□□ 10.6
DDX52Q9Y2R4 MYO18A-202ENST00000527372 9992 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.573e-6■□□□□ 10.6
DDX52Q9Y2R4 MYO18A-223ENST00000628822 7501 ntAPPRIS ALT1 TSL 5 BASIC11.4□□□□□ -0.583e-6■□□□□ 10.6
DDX52Q9Y2R4 MYO18A-209ENST00000531253 7504 ntAPPRIS ALT1 TSL 5 BASIC11.4□□□□□ -0.583e-6■□□□□ 10.6
Retrieved 100 of 4,483 protein–RNA pairs in 114.1 ms