RNA–Protein interactions for RNA: ENST00000319248.12

PRDX1-202, Transcript of peroxiredoxin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDX1, Length 1,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDX1-202ENST00000319248 NISCHQ9Y2I1 1504 aa31■■■□□ 2.55
PRDX1-202ENST00000319248 CCDC180Q9P1Z9 1646 aa27.21■■□□□ 1.95
PRDX1-202ENST00000319248 ZCCHC6Q5VYS8 1495 aaKnown RBP25.99■■□□□ 1.75
PRDX1-202ENST00000319248 ABCC9O60706 1549 aa25.9■■□□□ 1.74
PRDX1-202ENST00000319248 DCAF1Q9Y4B6 1507 aa25.7■■□□□ 1.7
PRDX1-202ENST00000319248 MYO15BQ96JP2 1530 aa25.53■■□□□ 1.68
PRDX1-202ENST00000319248 DCAF8L2P0C7V8 631 aa25.49■■□□□ 1.67
PRDX1-202ENST00000319248 NACADO15069 1562 aa25.4■■□□□ 1.66
PRDX1-202ENST00000319248 RB1CC1Q8TDY2 1594 aa25.23■■□□□ 1.63
PRDX1-202ENST00000319248 SHROOM4Q9ULL8 1493 aa24.89■■□□□ 1.57
PRDX1-202ENST00000319248 SCRIBQ14160 1630 aa24.87■■□□□ 1.57
PRDX1-202ENST00000319248 UNC13AQ9UPW8 1703 aa24.71■■□□□ 1.55
PRDX1-202ENST00000319248 BICRAQ9NZM4 1560 aa24.52■■□□□ 1.52
PRDX1-202ENST00000319248 PABPN1Q86U42 306 aaKnown RBP eCLIP24.33■■□□□ 1.49
PRDX1-202ENST00000319248 CECR2Q9BXF3 1484 aa24.08■■□□□ 1.45
PRDX1-202ENST00000319248 BAZ1AQ9NRL2 1556 aaPredicted RBP23.95■■□□□ 1.42
PRDX1-202ENST00000319248 MROH2BQ7Z745 1585 aa23.91■■□□□ 1.42
PRDX1-202ENST00000319248 RSF1Q96T23 1441 aaPredicted RBP23.91■■□□□ 1.42
PRDX1-202ENST00000319248 SMARCA4P51532 1647 aa23.88■■□□□ 1.41
PRDX1-202ENST00000319248 SUPT5HO00267 1087 aaKnown RBP23.77■■□□□ 1.4
PRDX1-202ENST00000319248 EIF4G1Q04637 1599 aaKnown RBP23.77■■□□□ 1.4
PRDX1-202ENST00000319248 WIZO95785 1651 aa23.68■■□□□ 1.38
PRDX1-202ENST00000319248 PEG3Q9GZU2 1588 aa23.67■■□□□ 1.38
PRDX1-202ENST00000319248 ATAD2BQ9ULI0 1458 aa23.58■■□□□ 1.37
PRDX1-202ENST00000319248 SMARCA2P51531 1590 aa23.55■■□□□ 1.36
PRDX1-202ENST00000319248 CC2D2AQ9P2K1 1620 aa23.48■■□□□ 1.35
PRDX1-202ENST00000319248 TOP2AP11388 1531 aaKnown RBP23.47■■□□□ 1.35
PRDX1-202ENST00000319248 NCAPD3P42695 1498 aa23.46■■□□□ 1.35
PRDX1-202ENST00000319248 HMGXB3Q12766 1538 aa23.39■■□□□ 1.34
PRDX1-202ENST00000319248 BAZ1BQ9UIG0 1483 aaKnown RBP23.38■■□□□ 1.33
PRDX1-202ENST00000319248 CCDC88BA6NC98 1476 aa23.2■■□□□ 1.3
PRDX1-202ENST00000319248 DNAJC5BQ9UF47 199 aa23.17■■□□□ 1.3
PRDX1-202ENST00000319248 CFTRP13569 1480 aa22.84■■□□□ 1.25
PRDX1-202ENST00000319248 CADPSQ9ULU8 1353 aa22.79■■□□□ 1.24
PRDX1-202ENST00000319248 CHIC1Q5VXU3 224 aa22.69■■□□□ 1.22
PRDX1-202ENST00000319248 PRDM2Q13029 1718 aa22.68■■□□□ 1.22
PRDX1-202ENST00000319248 LAMC3Q9Y6N6 1575 aa22.68■■□□□ 1.22
PRDX1-202ENST00000319248 NESP48681 1621 aa22.66■■□□□ 1.22
PRDX1-202ENST00000319248 ABCC8Q09428 1581 aa22.56■■□□□ 1.2
PRDX1-202ENST00000319248 FANCD2Q9BXW9 1451 aa22.52■■□□□ 1.2
PRDX1-202ENST00000319248 PDS5BQ9NTI5 1447 aa22.48■■□□□ 1.19
PRDX1-202ENST00000319248 WRNQ14191 1432 aaPredicted RBP eCLIP22.48■■□□□ 1.19
PRDX1-202ENST00000319248 TRIM41Q8WV44 630 aa22.43■■□□□ 1.18
PRDX1-202ENST00000319248 SYNJ1O43426 1573 aa22.42■■□□□ 1.18
PRDX1-202ENST00000319248 CEP164Q9UPV0 1460 aa22.41■■□□□ 1.18
PRDX1-202ENST00000319248 KIF21AQ7Z4S6 1674 aa22.4■■□□□ 1.18
PRDX1-202ENST00000319248 CUX1P39880 1505 aa22.39■■□□□ 1.17
PRDX1-202ENST00000319248 BIVM-ERCC5R4GMW8 1640 aa22.38■■□□□ 1.17
PRDX1-202ENST00000319248 TOP2BQ02880 1626 aa22.37■■□□□ 1.17
PRDX1-202ENST00000319248 DNMBPQ6XZF7 1577 aa22.29■■□□□ 1.16
PRDX1-202ENST00000319248 URB2Q14146 1524 aaKnown RBP22.28■■□□□ 1.16
PRDX1-202ENST00000319248 TOPBP1Q92547 1522 aa22.26■■□□□ 1.15
PRDX1-202ENST00000319248 MRC2Q9UBG0 1479 aa22.24■■□□□ 1.15
PRDX1-202ENST00000319248 ERCC6Q03468 1493 aa22.21■■□□□ 1.15
PRDX1-202ENST00000319248 FGD5Q6ZNL6 1462 aa22.17■■□□□ 1.14
PRDX1-202ENST00000319248 THOC2Q8NI27 1593 aaKnown RBP22.16■■□□□ 1.14
PRDX1-202ENST00000319248 WDR62O43379 1518 aa22.16■■□□□ 1.14
PRDX1-202ENST00000319248 POLA1P09884 1462 aaPredicted RBP22.12■■□□□ 1.13
PRDX1-202ENST00000319248 SOGA1O94964 1423 aa22.09■■□□□ 1.13
PRDX1-202ENST00000319248 RUSC2Q8N2Y8 1516 aa22.03■■□□□ 1.12
PRDX1-202ENST00000319248 RAD54L2Q9Y4B4 1467 aa22.02■■□□□ 1.12
PRDX1-202ENST00000319248 EEA1Q15075 1411 aa22.01■■□□□ 1.11
PRDX1-202ENST00000319248 CUX2O14529 1486 aa22.01■■□□□ 1.11
PRDX1-202ENST00000319248 ABCA10Q8WWZ4 1543 aa22■■□□□ 1.11
PRDX1-202ENST00000319248 WDR97A6NE52 1622 aa21.98■■□□□ 1.11
PRDX1-202ENST00000319248 TARBP1Q13395 1621 aaKnown RBP21.98■■□□□ 1.11
PRDX1-202ENST00000319248 FAM9AQ8IZU1 332 aaPredicted RBP21.94■■□□□ 1.1
PRDX1-202ENST00000319248 KIF27Q86VH2 1401 aa21.94■■□□□ 1.1
PRDX1-202ENST00000319248 IFT140Q96RY7 1462 aa21.91■■□□□ 1.1
PRDX1-202ENST00000319248 CSRNP3Q8WYN3 585 aa21.88■■□□□ 1.09
PRDX1-202ENST00000319248 ABCA5Q8WWZ7 1642 aa21.86■■□□□ 1.09
PRDX1-202ENST00000319248 IGF1RP08069 1367 aa21.81■■□□□ 1.08
PRDX1-202ENST00000319248 TDRD9Q8NDG6 1382 aaKnown RBP21.81■■□□□ 1.08
PRDX1-202ENST00000319248 ZNF608Q9ULD9 1512 aaPredicted RBP21.79■■□□□ 1.08
PRDX1-202ENST00000319248 GAPVD1Q14C86 1478 aa21.78■■□□□ 1.08
PRDX1-202ENST00000319248 PRXQ9BXM0 1461 aa21.77■■□□□ 1.07
PRDX1-202ENST00000319248 KIF21BO75037 1637 aa21.76■■□□□ 1.07
PRDX1-202ENST00000319248 LOC105371045A0A1W2PR82 267 aa21.75■■□□□ 1.07
PRDX1-202ENST00000319248 AQRO60306 1485 aaKnown RBP eCLIP21.74■■□□□ 1.078e-7■■■■□ 23.2
PRDX1-202ENST00000319248 ERICH3Q5RHP9 1530 aa21.74■■□□□ 1.07
PRDX1-202ENST00000319248 EIF4G3O43432 1585 aaKnown RBP21.71■■□□□ 1.07
PRDX1-202ENST00000319248 PBRM1Q86U86 1689 aa21.69■■□□□ 1.06
PRDX1-202ENST00000319248 GRIN2BQ13224 1484 aa21.67■■□□□ 1.06
PRDX1-202ENST00000319248 CUL7Q14999 1698 aa21.66■■□□□ 1.06
PRDX1-202ENST00000319248 GOLGA3Q08378 1498 aa21.66■■□□□ 1.06
PRDX1-202ENST00000319248 CARMIL1Q5VZK9 1371 aa21.66■■□□□ 1.06
PRDX1-202ENST00000319248 RAPGEF2Q9Y4G8 1499 aa21.65■■□□□ 1.06
PRDX1-202ENST00000319248 ADAMTS12P58397 1594 aa21.58■■□□□ 1.05
PRDX1-202ENST00000319248 EHMT2Q96KQ7 1210 aa21.57■■□□□ 1.04
PRDX1-202ENST00000319248 TNIKQ9UKE5 1360 aa21.56■■□□□ 1.04
PRDX1-202ENST00000319248 FHAD1B1AJZ9 1412 aa21.55■■□□□ 1.04
PRDX1-202ENST00000319248 SNAPC4Q5SXM2 1469 aa21.55■■□□□ 1.04
PRDX1-202ENST00000319248 MAGI1Q96QZ7 1491 aaPredicted RBP21.54■■□□□ 1.04
PRDX1-202ENST00000319248 UBTFP17480 764 aaKnown RBP21.49■■□□□ 1.03
PRDX1-202ENST00000319248 SYNJ2O15056 1496 aa21.45■■□□□ 1.03
PRDX1-202ENST00000319248 GRIN2AQ12879 1464 aa21.41■■□□□ 1.02
PRDX1-202ENST00000319248 CEP162Q5TB80 1403 aa21.38■■□□□ 1.01
PRDX1-202ENST00000319248 CTTNBP2Q8WZ74 1663 aa21.36■■□□□ 1.01
PRDX1-202ENST00000319248 CHMP7Q8WUX9 453 aaPredicted RBP21.33■■□□□ 1.01
PRDX1-202ENST00000319248 NUP160Q12769 1436 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms