RNA–Protein interactions for RNA: ENST00000613242.4

E2F3-203, Transcript of E2F transcription factor 3, humanhuman

TSL 5 BASIC

Gene E2F3, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3-203ENST00000613242 NISCHQ9Y2I1 1504 aa21.17■□□□□ 0.98
E2F3-203ENST00000613242 SUPT5HO00267 1087 aaKnown RBP20.38■□□□□ 0.85
E2F3-203ENST00000613242 PCGF6Q9BYE7 350 aa20.15■□□□□ 0.82
E2F3-203ENST00000613242 PELP1Q8IZL8 1130 aaKnown RBP20.11■□□□□ 0.81
E2F3-203ENST00000613242 SHROOM4Q9ULL8 1493 aa20.1■□□□□ 0.81
E2F3-203ENST00000613242 HRCP23327 699 aa20.06■□□□□ 0.8
E2F3-203ENST00000613242 DCAF8L2P0C7V8 631 aa19.78■□□□□ 0.76
E2F3-203ENST00000613242 PPARGC1BQ86YN6 1023 aaKnown RBP19.72■□□□□ 0.75
E2F3-203ENST00000613242 MYT1Q01538 1121 aa19.55■□□□□ 0.72
E2F3-203ENST00000613242 ZEB1P37275 1124 aaPredicted RBP19.42■□□□□ 0.7
E2F3-203ENST00000613242 CENPBP07199 599 aaPredicted RBP19.27■□□□□ 0.67
E2F3-203ENST00000613242 EHMT2Q96KQ7 1210 aa19.27■□□□□ 0.67
E2F3-203ENST00000613242 CHIC1Q5VXU3 224 aa19.24■□□□□ 0.67
E2F3-203ENST00000613242 TRIM26Q12899 539 aaPredicted RBP19.23■□□□□ 0.67
E2F3-203ENST00000613242 LOC105371045A0A1W2PR82 267 aa19.08■□□□□ 0.64
E2F3-203ENST00000613242 FAM9AQ8IZU1 332 aaPredicted RBP19.05■□□□□ 0.64
E2F3-203ENST00000613242 CCER1Q8TC90 406 aaPredicted RBP18.98■□□□□ 0.63
E2F3-203ENST00000613242 SCAF1Q9H7N4 1312 aaKnown RBP18.88■□□□□ 0.61
E2F3-203ENST00000613242 YTHDC1Q96MU7 727 aaKnown RBP18.87■□□□□ 0.61
E2F3-203ENST00000613242 GTF3C3Q9Y5Q9 886 aa18.8■□□□□ 0.6
E2F3-203ENST00000613242 TTBK1Q5TCY1 1321 aaPredicted RBP18.8■□□□□ 0.6
E2F3-203ENST00000613242 TRIM41Q8WV44 630 aa18.74■□□□□ 0.59
E2F3-203ENST00000613242 ACIN1Q9UKV3 1341 aaKnown RBP18.73■□□□□ 0.59
E2F3-203ENST00000613242 DIEXFQ68CQ4 756 aaKnown RBP18.64■□□□□ 0.58
E2F3-203ENST00000613242 MYO15BQ96JP2 1530 aa18.64■□□□□ 0.57
E2F3-203ENST00000613242 DCAF1Q9Y4B6 1507 aa18.58■□□□□ 0.57
E2F3-203ENST00000613242 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.58■□□□□ 0.56
E2F3-203ENST00000613242 NEUROD1Q13562 356 aa18.54■□□□□ 0.56
E2F3-203ENST00000613242 ERICH6Q7L0X2 663 aa18.31■□□□□ 0.52
E2F3-203ENST00000613242 APLP2Q06481 763 aa18.28■□□□□ 0.52
E2F3-203ENST00000613242 CCDC180Q9P1Z9 1646 aa18.16■□□□□ 0.5
E2F3-203ENST00000613242 NEFLP07196 543 aa18.15■□□□□ 0.5
E2F3-203ENST00000613242 ZNF316A6NFI3 1004 aaPredicted RBP18.15■□□□□ 0.5
E2F3-203ENST00000613242 UBTFP17480 764 aaKnown RBP18.1■□□□□ 0.49
E2F3-203ENST00000613242 HNRNPUL2Q1KMD3 747 aaKnown RBP18.06■□□□□ 0.48
E2F3-203ENST00000613242 SLC24A1O60721 1099 aa18.04■□□□□ 0.48
E2F3-203ENST00000613242 RANGAP1P46060 587 aaPredicted RBP17.98■□□□□ 0.47
E2F3-203ENST00000613242 BCANQ96GW7 911 aa17.96■□□□□ 0.47
E2F3-203ENST00000613242 MIER1Q8N108 512 aa17.87■□□□□ 0.45
E2F3-203ENST00000613242 ZCCHC6Q5VYS8 1495 aaKnown RBP17.84■□□□□ 0.45
E2F3-203ENST00000613242 ANP32EQ9BTT0 268 aa17.8■□□□□ 0.44
E2F3-203ENST00000613242 BCL11AQ9H165 835 aa17.78■□□□□ 0.44
E2F3-203ENST00000613242 CLSPNQ9HAW4 1339 aa17.78■□□□□ 0.44
E2F3-203ENST00000613242 AEBP2Q6ZN18 517 aaPredicted RBP17.63■□□□□ 0.41
E2F3-203ENST00000613242 FKBP8Q14318 412 aa17.62■□□□□ 0.41
E2F3-203ENST00000613242 ITGAEP38570 1179 aa17.61■□□□□ 0.41
E2F3-203ENST00000613242 SUPT16HQ9Y5B9 1047 aaKnown RBP17.58■□□□□ 0.4
E2F3-203ENST00000613242 CDK11AQ9UQ88 783 aaPredicted RBP17.51■□□□□ 0.39
E2F3-203ENST00000613242 RTL5Q5HYW3 569 aaPredicted RBP17.49■□□□□ 0.39
E2F3-203ENST00000613242 CSRNP3Q8WYN3 585 aa17.48■□□□□ 0.39
E2F3-203ENST00000613242 TSHZ2Q9NRE2 1034 aa17.43■□□□□ 0.38
E2F3-203ENST00000613242 ATP1B4Q9UN42 357 aaPredicted RBP17.37■□□□□ 0.37
E2F3-203ENST00000613242 ANP32CO43423 234 aa17.36■□□□□ 0.37
E2F3-203ENST00000613242 TRIM52Q96A61 297 aa17.31■□□□□ 0.36
E2F3-203ENST00000613242 MYT1LQ9UL68 1186 aa17.3■□□□□ 0.36
E2F3-203ENST00000613242 DDX10Q13206 875 aaKnown RBP17.28■□□□□ 0.36
E2F3-203ENST00000613242 PLPPR3Q6T4P5 718 aa17.28■□□□□ 0.36
E2F3-203ENST00000613242 RSF1Q96T23 1441 aaPredicted RBP17.25■□□□□ 0.35
E2F3-203ENST00000613242 RBM19Q9Y4C8 960 aaKnown RBP17.24■□□□□ 0.35
E2F3-203ENST00000613242 CEP162Q5TB80 1403 aa17.24■□□□□ 0.35
E2F3-203ENST00000613242 NBR1Q14596 966 aa17.23■□□□□ 0.35
E2F3-203ENST00000613242 CNGB1Q14028 1251 aaPredicted RBP17.18■□□□□ 0.34
E2F3-203ENST00000613242 IRX6P78412 446 aaPredicted RBP17.17■□□□□ 0.34
E2F3-203ENST00000613242 DAXXQ9UER7 740 aaPredicted RBP17.16■□□□□ 0.34
E2F3-203ENST00000613242 HNRNPUQ00839 825 aaKnown RBP eCLIP17.14■□□□□ 0.33
E2F3-203ENST00000613242 ANP32AP39687 249 aaKnown RBP17.13■□□□□ 0.33
E2F3-203ENST00000613242 FAM50AQ14320 339 aaKnown RBP17.11■□□□□ 0.33
E2F3-203ENST00000613242 EIF5BO60841 1220 aaKnown RBP17.08■□□□□ 0.33
E2F3-203ENST00000613242 POLR3GLQ9BT43 218 aa17.07■□□□□ 0.32
E2F3-203ENST00000613242 SCRIBQ14160 1630 aa17.06■□□□□ 0.32
E2F3-203ENST00000613242 DEKP35659 375 aaKnown RBP17.05■□□□□ 0.32
E2F3-203ENST00000613242 TNIKQ9UKE5 1360 aa17.04■□□□□ 0.32
E2F3-203ENST00000613242 HIRIP3Q9BW71 556 aaPredicted RBP17.04■□□□□ 0.32
E2F3-203ENST00000613242 NPM2Q86SE8 214 aaKnown RBP17■□□□□ 0.31
E2F3-203ENST00000613242 RB1CC1Q8TDY2 1594 aa17■□□□□ 0.31
E2F3-203ENST00000613242 CLIP1P30622 1438 aa16.98■□□□□ 0.31
E2F3-203ENST00000613242 ZBTB47Q9UFB7 747 aaPredicted RBP16.97■□□□□ 0.31
E2F3-203ENST00000613242 KCNH8Q96L42 1107 aa16.94■□□□□ 0.3
E2F3-203ENST00000613242 RTN4Q9NQC3 1192 aaKnown RBP16.94■□□□□ 0.3
E2F3-203ENST00000613242 GOLGA3Q08378 1498 aa16.91■□□□□ 0.3
E2F3-203ENST00000613242 FAM9BQ8IZU0 186 aa16.89■□□□□ 0.29
E2F3-203ENST00000613242 NOP58Q9Y2X3 529 aaKnown RBP16.89■□□□□ 0.29
E2F3-203ENST00000613242 ABCC9O60706 1549 aa16.89■□□□□ 0.29
E2F3-203ENST00000613242 WRNQ14191 1432 aaPredicted RBP eCLIP16.87■□□□□ 0.29
E2F3-203ENST00000613242 EEA1Q15075 1411 aa16.87■□□□□ 0.29
E2F3-203ENST00000613242 CCDC136Q96JN2 1154 aa16.86■□□□□ 0.29
E2F3-203ENST00000613242 TONSLQ96HA7 1378 aa16.84■□□□□ 0.29
E2F3-203ENST00000613242 PRKCSHP14314 528 aaPredicted RBP16.84■□□□□ 0.29
E2F3-203ENST00000613242 PPP4R2Q9NY27 417 aa16.83■□□□□ 0.28
E2F3-203ENST00000613242 SOGA1O94964 1423 aa16.82■□□□□ 0.28
E2F3-203ENST00000613242 B4GALNT3Q6L9W6 998 aa16.81■□□□□ 0.28
E2F3-203ENST00000613242 SIN3AQ96ST3 1273 aa16.76■□□□□ 0.27
E2F3-203ENST00000613242 MRS2Q9HD23 443 aa16.76■□□□□ 0.27
E2F3-203ENST00000613242 CCER2I3L3R5 266 aa16.75■□□□□ 0.27
E2F3-203ENST00000613242 FANCIQ9NVI1 1328 aa16.75■□□□□ 0.27
E2F3-203ENST00000613242 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.72■□□□□ 0.27
E2F3-203ENST00000613242 CCDC88BA6NC98 1476 aa16.71■□□□□ 0.27
E2F3-203ENST00000613242 CECR2Q9BXF3 1484 aa16.7■□□□□ 0.26
E2F3-203ENST00000613242 DHX57Q6P158 1386 aaKnown RBP16.7■□□□□ 0.26
E2F3-203ENST00000613242 PHF23Q9BUL5 403 aaPredicted RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms